Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G038500 Phaseolus vulgaris HOM05D007033 ORTHO05D008770 7.2e-65 250.4 121 100.0
VMungo0331G1478 Vigna mungo HOM05D007033 ORTHO05D008770 1.6e-59 232.6 121 93.4
Glyma.07G123600 Glycine max HOM05D007033 ORTHO05D008770 1.0e-55 219.9 121 86.0
Glyma.03G098200 Glycine max HOM05D007033 ORTHO05D008770 1.8e-55 219.2 121 86.0
PGR042G3214 Punica granatum HOM05D007033 ORTHO05D008770 8.3e-45 183.7 112 72.3
arahy.Tifrunner.gnm1.ann1.14YBGE Arachis hypogaea HOM05D007033 ORTHO05D008770 5.4e-44 181.0 123 72.4
arahy.Tifrunner.gnm1.ann1.GIK8C1 Arachis hypogaea HOM05D007033 ORTHO05D008770 5.4e-44 181.0 123 72.4
AL6G28700 Arabidopsis lyrata HOM05D007033 ORTHO05D008770 3.5e-43 178.3 112 72.3
CARHR195570 Cardamine hirsuta HOM05D007033 ORTHO05D008770 3.5e-43 178.3 112 72.3
AT5G17610 Arabidopsis thaliana HOM05D007033 ORTHO05D008770 5.9e-43 177.6 109 74.3
RcHm_v2.0_Chr1g0337311 Rosa chinensis HOM05D007033 ORTHO05D008770 7.7e-43 177.2 108 73.1
TPR.G17361 Trifolium pratense HOM05D007033 ORTHO05D008770 7.7e-43 177.2 113 76.1
TWI60G0127 Tripterygium wilfordii HOM05D007033 ORTHO05D008770 1.3e-42 176.4 98 80.6
A02p04360 Brassica napus HOM05D007033 ORTHO05D008770 1.7e-42 176.0 107 75.7
BraA02t05400Z Brassica rapa HOM05D007033 ORTHO05D008770 1.7e-42 176.0 107 75.7
Lj3g0004375 Lotus japonicus HOM05D007033 ORTHO05D008770 1.7e-42 176.0 121 71.9
Thecc.05G231700 Theobroma cacao HOM05D007033 ORTHO05D008770 1.7e-42 176.0 117 71.8
Thhalv10014961m.g Eutrema salsugineum HOM05D007033 ORTHO05D008770 2.9e-42 175.3 107 73.8
Gohir.A13G085300 Gossypium hirsutum HOM05D007033 ORTHO05D008770 2.9e-42 175.3 112 73.2
C02p09210 Brassica napus HOM05D007033 ORTHO05D008770 3.8e-42 174.9 107 74.8
FvH4_7g07210 Fragaria vesca HOM05D007033 ORTHO05D008770 3.8e-42 174.9 108 71.3
BcaC03g13530 Brassica carinata HOM05D007033 ORTHO05D008770 5.0e-42 174.5 107 74.8
BolC2t06829H Brassica oleracea HOM05D007033 ORTHO05D008770 5.0e-42 174.5 107 74.8
Sp6g26610 Schrenkiella parvula HOM05D007033 ORTHO05D008770 8.5e-42 173.7 107 72.9
FAN03G2679 Fragaria x ananassa HOM05D007033 ORTHO05D008770 1.1e-41 173.3 108 70.4
FAN06G3925 Fragaria x ananassa HOM05D007033 ORTHO05D008770 1.1e-41 173.3 108 70.4
Manes.08G157600 Manihot esculenta HOM05D007033 ORTHO05D008770 1.1e-41 173.3 117 69.2
Gohir.D13G100400 Gossypium hirsutum HOM05D007033 ORTHO05D008770 1.5e-41 172.9 112 72.3
Gorai.013G112100 Gossypium raimondii HOM05D007033 ORTHO05D008770 1.5e-41 172.9 112 72.3
GSVIVG01011318001 Vitis vinifera HOM05D007033 ORTHO05D008770 1.9e-41 172.6 111 71.2
Dinv43975 Davidia involucrata HOM05D007033 ORTHO05D008770 3.2e-41 171.8 114 69.3
Prupe.2G100000 Prunus persica HOM05D007033 ORTHO05D008770 3.2e-41 171.8 108 71.3
Carub.0006s1585 Capsella rubella HOM05D007033 ORTHO05D008770 7.2e-41 170.6 112 72.3
Eucgr.E01772 Eucalyptus grandis HOM05D007033 ORTHO05D008770 7.2e-41 170.6 108 68.5
Hma1.2p1_0353F.1_g133340 Hydrangea macrophylla HOM05D007033 ORTHO05D008770 1.2e-40 169.9 106 70.8
THA.LOC104827245 Tarenaya hassleriana HOM05D007033 ORTHO05D008770 1.6e-40 169.5 110 70.9
Nn3g19225 Nelumbo nucifera HOM05D007033 ORTHO05D008770 2.1e-40 169.1 112 67.0
MD02G1238400 Malus domestica HOM05D007033 ORTHO05D008770 2.8e-40 168.7 103 75.7
Ciclev10033075m.g Citrus clementina HOM05D007033 ORTHO05D008770 4.7e-40 167.9 114 69.3
MD07G1078200 Malus domestica HOM05D007033 ORTHO05D008770 6.1e-40 167.5 111 72.1
Aqoxy5G03237 Aquilegia oxysepala HOM05D007033 ORTHO05D008770 1.0e-39 166.8 111 66.7
Haze_15805 Corylus avellana HOM05D007033 ORTHO05D008770 1.0e-39 166.8 110 68.2
Rhsim12G0078100 Rhododendron simsii HOM05D007033 ORTHO05D008770 1.4e-39 166.4 112 67.0
Lalb_Chr12g0210181 Lupinus albus HOM05D007033 ORTHO05D008770 4.0e-39 164.9 112 69.6
CDE12G0505 Ceratophyllum demersum HOM05D007033 ORTHO05D008770 5.2e-39 164.5 122 64.8
Sed0003013 Sechium edule HOM05D007033 ORTHO05D008770 5.2e-39 164.5 105 67.6
Sc23g0004770 Simmondsia chinensis HOM05D007033 ORTHO05D008770 5.2e-39 164.5 104 72.1
Actinidia21596 Actinidia chinensis HOM05D007033 ORTHO05D008770 1.2e-38 163.3 96 76.0
BcaC04g18775 Brassica carinata HOM05D007033 ORTHO05D008770 1.5e-38 162.9 111 67.6
C09p59560 Brassica napus HOM05D007033 ORTHO05D008770 1.5e-38 162.9 111 67.6
BolC9t58794H Brassica oleracea HOM05D007033 ORTHO05D008770 1.5e-38 162.9 111 67.6
CANSAT35G1406 Cannabis sativa HOM05D007033 ORTHO05D008770 2.6e-38 162.2 110 67.3
CsaV3_3G010550 Cucumis sativus L. HOM05D007033 ORTHO05D008770 2.6e-38 162.2 106 66.0
PSO782G0028 Papaver somniferum HOM05D007033 ORTHO05D008770 2.6e-38 162.2 117 63.2
Psat4g215800 Pisum sativum HOM05D007033 ORTHO05D008770 3.4e-38 161.8 103 78.6
ClCG05G002970 Citrullus lanatus HOM05D007033 ORTHO05D008770 5.7e-38 161.0 105 65.7
CiPaw.02G048600 Carya illinoinensis HOM05D007033 ORTHO05D008770 7.5e-38 160.6 110 68.2
MELO3C006276.2 Cucumis melo HOM05D007033 ORTHO05D008770 9.8e-38 160.2 105 64.8
Potri.013G073100 Populus trichocarpa HOM05D007033 ORTHO05D008770 9.8e-38 160.2 110 67.3
EL10Ac1g00673 Beta vulgaris HOM05D007033 ORTHO05D008770 1.7e-37 159.5 119 63.0
Migut.B01441 Erythranthe guttata HOM05D007033 ORTHO05D008770 3.7e-37 158.3 111 64.9
PGSC0003DMG400001787 Solanum tuberosum HOM05D007033 ORTHO05D008770 4.9e-37 157.9 108 65.7
PSO063G1631 Papaver somniferum HOM05D007033 ORTHO05D008770 6.3e-37 157.5 117 61.5
HPP92_003404 Vanilla planifolia HOM05D007033 ORTHO05D008770 6.3e-37 157.5 107 69.2
ECA234G3633 Erigeron canadensis HOM05D007033 ORTHO05D008770 1.1e-36 156.8 107 68.2
Cc02_g26390 Coffea canephora HOM05D007033 ORTHO05D008770 1.4e-36 156.4 107 67.3
HPP92_003427 Vanilla planifolia HOM05D007033 ORTHO05D008770 2.4e-36 155.6 107 68.2
Sopen01g032780 Solanum pennellii HOM05D007033 ORTHO05D008770 3.1e-36 155.2 113 63.7
CAN.G700.33 Capsicum annuum HOM05D007033 ORTHO05D008770 4.1e-36 154.8 110 63.6
MBI16_g43713_MAGBIO Magnolia biondii HOM05D007033 ORTHO05D008770 4.1e-36 154.8 87 77.0
Solyc01g081200.3 Solanum lycopersicum HOM05D007033 ORTHO05D008770 4.1e-36 154.8 113 63.7
vmacro21112 Vaccinium macrocarpon HOM05D007033 ORTHO05D008770 4.1e-36 154.8 87 74.7
Peaxi162Scf00592g00448 Petunia axillaris HOM05D007033 ORTHO05D008770 5.4e-36 154.5 111 62.2
HanXRQChr03g0088201 Helianthus annuus HOM05D007033 ORTHO05D008770 1.2e-35 153.3 108 63.0
Zm00001eb009070 Zea mays HOM05D007033 ORTHO05D008770 5.9e-35 151.0 115 61.7
COL.COLO4_08541 Corchorus olitorius HOM05D007033 ORTHO05D008770 7.8e-35 150.6 95 72.6
Lsat_1_v5_gn_4_42281 Lactuca sativa HOM05D007033 ORTHO05D008770 1.0e-34 150.2 108 65.7
Sed0002871 Sechium edule HOM05D007033 ORTHO05D008770 3.8e-34 148.3 105 61.9
Cfa003682 Carpinus fangiana HOM05D007033 ORTHO05D008770 5.0e-34 147.9 128 58.6
SGA_v2.0_scaffold98G29399 Striga asiatica HOM05D007033 ORTHO05D008770 1.5e-33 146.4 133 54.1
Hund17162 Selenicereus undatus HOM05D007033 ORTHO05D008770 1.6e-32 142.9 109 59.6
QL04p052404 Quercus lobata HOM05D007033 ORTHO05D008770 1.4e-31 139.8 91 68.1
Sabra13G0063200 Salix brachista HOM05D007033 ORTHO05D008770 2.3e-31 139.0 101 68.3
SalBow5G2417 Salvia bowleyana HOM05D007033 ORTHO05D008770 3.0e-31 138.7 97 67.0
Nitab4.5_0004594g0020 Nicotiana tabacum HOM05D007033 ORTHO05D008770 6.8e-31 137.5 98 64.3
Sc23g0004660 Simmondsia chinensis HOM05D007033 ORTHO05D008770 8.9e-31 137.1 106 63.2
ATR0829G185 Amborella trichopoda HOM05D007033 ORTHO05D008770 7.5e-30 134.0 81 71.6
BraA10t44240Z Brassica rapa HOM05D007033 ORTHO05D008770 9.8e-30 133.7 90 67.8
Nitab4.5_0004800g0080 Nicotiana tabacum HOM05D007033 ORTHO05D008770 1.7e-29 132.9 97 62.9
unitig_8.g3853 Utricularia gibba HOM05D007033 ORTHO05D008770 2.2e-29 132.5 104 55.8
MBI16_g43476_MAGBIO Magnolia biondii HOM05D007033 ORTHO05D008770 2.9e-29 132.1 72 76.4
AUR62014520 Chenopodium quinoa HOM05D007033 ORTHO05D008770 2.4e-28 129.0 95 66.3
AUR62038014 Chenopodium quinoa HOM05D007033 ORTHO05D008770 2.0e-27 125.9 95 65.3
Ah.05g177250 Amaranthus hybridus HOM05D007033 ORTHO05D008770 5.9e-27 124.4 83 63.9
HPP92_025932 Vanilla planifolia HOM05D007033 ORTHO05D008770 1.3e-26 123.2 94 61.7
SEGI_14041 Sequoiadendron giganteum HOM05D007033 ORTHO05D008770 1.8e-23 112.8 96 54.2
AagrBONN_evm.TU.Sc2ySwM_368.1536 Anthoceros agrestis HOM05D007033 ORTHO05D008770 5.8e-22 107.8 98 49.0
Mapoly0058s0110 Marchantia polymorpha HOM05D007033 ORTHO05D008770 9.8e-22 107.1 98 51.0
Pp3c19_9960 Physcomitrium patens HOM05D007033 ORTHO05D008770 9.8e-22 107.1 106 49.1
A10p21800 Brassica napus HOM05D007033 ORTHO05D008770 2.2e-21 105.9 52 84.6
SMO351G0381 Selaginella moellendorffii HOM05D007033 ORTHO05D008770 1.4e-20 103.2 112 40.2
TAR629G3499 Trochodendron aralioides HOM05D007033 ORTHO05D008770 5.4e-20 101.3 57 71.9
Pp3c7_5640 Physcomitrium patens HOM05D007033 ORTHO05D008770 7.0e-20 100.9 96 49.0
Pp3c18_1710 Physcomitrium patens HOM05D007033 ORTHO05D008770 5.0e-18 94.7 71 54.9
Atru.chr2.1689 Acer truncatum HOM05D007033 ORTHO05D008770 1.5e-14 83.2 43 83.7
Sopen05g015510 Solanum pennellii HOM05D007033 ORTHO05D008770 1.4e-12 76.6 48 66.7
PRCOL_00006026 Prasinoderma coloniale HOM05D007033 ORTHO05D008770 1.1e-07 60.5 44 54.5
Peaxi162Scf00117g01735 Petunia axillaris HOM05D007033 ORTHO05D008770 1.4e-07 60.1 81 42.0
MCO10G230 Micromonas commoda HOM05D007033 ORTHO05D008770 2.0e-06 56.2 69 36.2


User provided reference genes

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