Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G036300 Phaseolus vulgaris HOM05D007112 ORTHO05D008930 5.9e-143 510.8 240 100.0
VMungo0331G1777 Vigna mungo HOM05D007112 ORTHO05D008930 1.0e-123 446.8 240 87.5
Glyma.07G124300 Glycine max HOM05D007112 ORTHO05D008930 2.5e-117 425.6 240 83.3
Glyma.03G097000 Glycine max HOM05D007112 ORTHO05D008930 6.1e-116 421.0 244 83.2
LjContig00389g0002281 Lotus japonicus HOM05D007112 ORTHO05D008930 2.0e-106 389.4 233 78.5
Psat4g208280 Pisum sativum HOM05D007112 ORTHO05D008930 1.9e-101 372.9 240 76.2
Medtr8g010140 Medicago truncatula HOM05D007112 ORTHO05D008930 6.8e-99 364.4 240 74.2
arahy.Tifrunner.gnm1.ann1.T2R7SH Arachis hypogaea HOM05D007112 ORTHO05D008930 3.7e-97 358.6 235 74.0
TPR.G17379 Trifolium pratense HOM05D007112 ORTHO05D008930 3.7e-97 358.6 232 74.1
Ca_23159_v3 Cicer arietinum L. HOM05D007112 ORTHO05D008930 7.0e-96 354.4 242 73.1
Lalb_Chr07g0194661 Lupinus albus HOM05D007112 ORTHO05D008930 1.4e-91 340.1 246 68.7
arahy.Tifrunner.gnm1.ann1.X2Q8CL Arachis hypogaea HOM05D007112 ORTHO05D008930 5.7e-90 334.7 234 70.5
TAR362G0557 Trochodendron aralioides HOM05D007112 ORTHO05D008930 1.3e-78 297.0 226 62.4
Atru.chr6.3529 Acer truncatum HOM05D007112 ORTHO05D008930 5.6e-77 291.6 232 61.2
Cfa017735 Carpinus fangiana HOM05D007112 ORTHO05D008930 4.4e-74 282.0 225 61.3
Ciclev10016325m.g Citrus clementina HOM05D007112 ORTHO05D008930 9.8e-74 280.8 231 58.4
GSVIVG01001529001 Vitis vinifera HOM05D007112 ORTHO05D008930 9.8e-74 280.8 226 59.3
RcHm_v2.0_Chr6g0282211 Rosa chinensis HOM05D007112 ORTHO05D008930 6.0e-71 271.6 225 57.8
Hma1.2p1_1043F.1_g251280 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 4.3e-69 265.4 224 57.1
FvH4_2g17490 Fragaria vesca HOM05D007112 ORTHO05D008930 9.5e-69 264.2 225 57.8
Prupe.8G187100 Prunus persica HOM05D007112 ORTHO05D008930 1.2e-68 263.8 238 57.1
MD05G1153700 Malus domestica HOM05D007112 ORTHO05D008930 1.6e-68 263.5 230 56.1
FAN15G3611 Fragaria x ananassa HOM05D007112 ORTHO05D008930 4.7e-68 261.9 225 57.8
TWI36G0064 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 6.2e-68 261.5 221 57.5
Dinv28792 Davidia involucrata HOM05D007112 ORTHO05D008930 1.4e-67 260.4 226 56.6
Duzib133G1446 Durio zibethinus HOM05D007112 ORTHO05D008930 2.6e-66 256.1 226 53.1
Rhsim01G0247600 Rhododendron simsii HOM05D007112 ORTHO05D008930 4.4e-66 255.4 223 57.8
Lj2A1111T23 Lonicera japonica HOM05D007112 ORTHO05D008930 7.6e-66 254.6 234 54.3
CSS0005940 Camellia sinensis var. sinensis HOM05D007112 ORTHO05D008930 9.9e-66 254.2 228 54.8
ClCG09G008370 Citrullus lanatus HOM05D007112 ORTHO05D008930 9.9e-66 254.2 235 52.3
COL.COLO4_34270 Corchorus olitorius HOM05D007112 ORTHO05D008930 4.9e-65 251.9 225 52.4
Gohir.A07G195600 Gossypium hirsutum HOM05D007112 ORTHO05D008930 8.4e-65 251.1 228 53.5
ECA247G2139 Erigeron canadensis HOM05D000092 ORTHO05D008930 1.1e-64 250.8 226 56.6
HanXRQChr08g0231791 Helianthus annuus HOM05D007112 ORTHO05D008930 1.1e-64 250.8 220 58.2
Sabra14G0134200 Salix brachista HOM05D007112 ORTHO05D008930 1.1e-64 250.8 222 56.8
PSO675G4719 Papaver somniferum HOM05D007112 ORTHO05D008930 1.4e-64 250.4 255 50.6
Oeu013523.1 Olea europaea HOM05D007112 ORTHO05D008930 1.9e-64 250.0 223 56.1
Actinidia23803 Actinidia chinensis HOM05D007112 ORTHO05D008930 3.2e-64 249.2 225 54.2
Thecc.01G207600 Theobroma cacao HOM05D007112 ORTHO05D008930 7.1e-64 248.1 228 53.1
Aqoxy5G04050 Aquilegia oxysepala HOM05D007112 ORTHO05D008930 9.2e-64 247.7 228 52.2
Gorai.001G227200 Gossypium raimondii HOM05D007112 ORTHO05D008930 1.6e-63 246.9 226 53.5
CsaV3_7G026720 Cucumis sativus L. HOM05D007112 ORTHO05D008930 2.7e-63 246.1 230 53.5
Gohir.D07G202200 Gossypium hirsutum HOM05D007112 ORTHO05D008930 4.6e-63 245.4 226 53.5
Carub.0003s0707 Capsella rubella HOM05D007112 ORTHO05D008930 3.9e-62 242.3 233 54.1
FAN24G0137 Fragaria x ananassa HOM05D007112 ORTHO05D008930 1.1e-61 240.7 233 52.4
PSO732G0401 Papaver somniferum HOM05D007112 ORTHO05D008930 1.1e-61 240.7 244 49.6
THA.LOC104819012 Tarenaya hassleriana HOM05D007112 ORTHO05D008930 1.5e-61 240.4 222 51.8
SalBow3G4154 Salvia bowleyana HOM05D007112 ORTHO05D008930 2.5e-61 239.6 225 52.0
Nitab4.5_0000038g0350 Nicotiana tabacum HOM05D007112 ORTHO05D008930 9.6e-61 237.7 234 49.1
CARHR082180 Cardamine hirsuta HOM05D007112 ORTHO05D008930 1.6e-60 236.9 228 54.4
Migut.D00774 Erythranthe guttata HOM05D007112 ORTHO05D008930 2.1e-60 236.5 222 50.5
QL05p089159 Quercus lobata HOM05D007112 ORTHO05D008930 2.1e-60 236.5 220 55.5
Nitab4.5_0010469g0020 Nicotiana tabacum HOM05D007112 ORTHO05D008930 4.7e-60 235.3 227 49.8
Sed0011312 Sechium edule HOM05D007112 ORTHO05D008930 8.1e-60 234.6 230 51.3
Aa31LG5G18060 Aethionema arabicum HOM05D007112 ORTHO05D008930 2.4e-59 233.0 222 52.7
Lsat_1_v5_gn_9_16901 Lactuca sativa HOM05D007112 ORTHO05D008930 4.0e-59 232.3 220 55.0
Sp3g06430 Schrenkiella parvula HOM05D007112 ORTHO05D008930 4.0e-59 232.3 220 56.4
CANSAT01G1474 Cannabis sativa HOM05D007112 ORTHO05D008930 5.2e-59 231.9 236 50.8
Eucgr.K02360 Eucalyptus grandis HOM05D007112 ORTHO05D008930 1.5e-58 230.3 220 54.1
vmacro14688 Vaccinium macrocarpon HOM05D007112 ORTHO05D008930 2.0e-58 229.9 222 53.2
PGSC0003DMG400021909 Solanum tuberosum HOM05D007112 ORTHO05D008930 5.8e-58 228.4 219 53.0
AT3G07525 Arabidopsis thaliana HOM05D007112 ORTHO05D008930 7.6e-58 228.0 220 52.7
BraA05t22800Z Brassica rapa HOM05D007112 ORTHO05D008930 2.9e-57 226.1 219 53.4
AUR62008068 Chenopodium quinoa HOM05D007112 ORTHO05D008930 6.4e-57 224.9 223 50.7
Solyc09g047840.3 Solanum lycopersicum HOM05D007112 ORTHO05D008930 6.4e-57 224.9 219 53.4
Thhalv10022158m.g Eutrema salsugineum HOM05D007112 ORTHO05D008930 8.4e-57 224.6 221 54.8
MSTRG.18505 Avicennia marina HOM05D007112 ORTHO05D008930 1.1e-56 224.2 226 52.7
BcaC05g29544 Brassica carinata HOM05D007112 ORTHO05D008930 1.9e-56 223.4 219 53.9
ATR0752G208 Amborella trichopoda HOM05D007112 ORTHO05D008930 5.4e-56 221.9 229 48.0
A05p40690 Brassica napus HOM05D007112 ORTHO05D008930 7.1e-56 221.5 219 53.9
Peaxi162Scf02239g00022 Petunia axillaris HOM05D007112 ORTHO05D008930 1.6e-55 220.3 229 47.2
Hund02806 Selenicereus undatus HOM05D007112 ORTHO05D008930 1.6e-55 220.3 221 50.2
Sopen09g015950 Solanum pennellii HOM05D007112 ORTHO05D008930 1.6e-55 220.3 219 52.5
AUR62028645 Chenopodium quinoa HOM05D007112 ORTHO05D008930 4.6e-55 218.8 223 49.8
Cc01_g15870 Coffea canephora HOM05D007112 ORTHO05D008930 4.6e-55 218.8 234 47.0
CiPaw.14G038400 Carya illinoinensis HOM05D007112 ORTHO05D008930 2.3e-54 216.5 190 54.7
BolC5t34634H Brassica oleracea HOM05D007112 ORTHO05D008930 3.0e-54 216.1 219 52.1
SHI30551 Sapria himalayana HOM05D007112 ORTHO05D008930 1.1e-53 214.2 226 46.9
Sc24g0003360 Simmondsia chinensis HOM05D007112 ORTHO05D008930 1.5e-53 213.8 229 46.7
C05p59800 Brassica napus HOM05D007112 ORTHO05D008930 5.6e-53 211.8 218 51.8
Manes.13G056200 Manihot esculenta HOM05D007112 ORTHO05D008930 5.6e-53 211.8 169 60.9
Nn7g37436 Nelumbo nucifera HOM05D007112 ORTHO05D008930 2.8e-52 209.5 162 66.7
unitig_60.g25572 Utricularia gibba HOM05D007112 ORTHO05D008930 3.1e-51 206.1 221 48.0
Zm00001eb425740 Zea mays HOM05D007112 ORTHO05D008930 2.4e-48 196.4 220 46.4
PGR044G1116 Punica granatum HOM05D007112 ORTHO05D008930 7.1e-48 194.9 222 45.5
HPP92_001291 Vanilla planifolia HOM05D007112 ORTHO05D008930 6.0e-47 191.8 216 46.8
Hma1.2p1_1043F.1_g251290 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 7.9e-47 191.4 140 64.3
MELO3C021125.2 Cucumis melo HOM05D007112 ORTHO05D008930 1.3e-44 184.1 160 56.9
Ah.11g050810 Amaranthus hybridus HOM05D007112 ORTHO05D008930 6.9e-43 178.3 224 42.4
MBI10_g35388_MAGBIO Magnolia biondii HOM05D007112 ORTHO05D008930 4.5e-42 175.6 253 39.1
Os04g0497350 Oryza sativa ssp. japonica HOM05D007112 ORTHO05D008930 4.5e-42 175.6 217 42.4
CDE05G1497 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 2.2e-41 173.3 172 53.5
CAN.G50.11 Capsicum annuum HOM05D007112 ORTHO05D008930 7.4e-37 158.3 123 58.5
HanXRQChr03g0082541 Helianthus annuus HOM05D007112 ORTHO05D008930 8.4e-33 144.8 104 66.3
DCAR_018609 Daucus carota HOM05D007112 ORTHO05D008930 1.4e-32 144.1 170 47.1
Haze_03375 Corylus avellana HOM05D007112 ORTHO05D008930 4.3e-29 132.5 151 46.4
Cpa.g.sc8.40 Carica papaya HOM05D007112 ORTHO05D008930 2.2e-28 130.2 129 48.1
Mapoly0002s0314 Marchantia polymorpha HOM05D007112 ORTHO05D008930 2.8e-28 129.8 269 29.7
Pp3c26_2050 Physcomitrium patens HOM05D007112 ORTHO05D008930 1.1e-24 117.9 182 34.1
MD10G1148000 Malus domestica HOM05D007112 ORTHO05D008930 4.6e-23 112.5 128 46.1
Haze_03371 Corylus avellana HOM05D007112 ORTHO05D008930 1.8e-22 110.5 106 54.7
AagrBONN_evm.TU.Sc2ySwM_344.2017 Anthoceros agrestis HOM05D007112 ORTHO05D008930 1.9e-21 107.1 186 34.9
Haze_03374 Corylus avellana HOM05D000072 ORTHO05D000026 6.9e-19 98.6 106 51.9
EL10Ac5g10586 Beta vulgaris HOM05D007112 ORTHO05D008930 1.7e-17 94.0 101 48.5
SMO141G0021 Selaginella moellendorffii HOM05D007112 ORTHO05D008930 3.2e-16 89.7 117 35.9
EL10Ac5g10588 Beta vulgaris HOM05D007112 ORTHO05D008930 1.6e-15 87.4 62 62.9
CDE05G2169 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 1.6e-15 87.4 199 34.2
SGA_v2.0_scaffold29G12307 Striga asiatica HOM05D007112 ORTHO05D008930 2.7e-15 86.7 156 35.3
TWI18G1453 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 3.9e-14 82.8 93 41.9
Nn7g37443 Nelumbo nucifera HOM05D007112 ORTHO05D008930 2.0e-13 80.5 62 50.0
C04p34930 Brassica napus HOM05D007112 ORTHO05D008930 1.4e-06 57.8 107 36.4
BolC4t25047H Brassica oleracea HOM05D007112 ORTHO05D027530 5.2e-06 55.8 106 34.9


User provided reference genes

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