Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G032800 Phaseolus vulgaris HOM05D007511 ORTHO05D003753 5.1e-69 264.2 128 100.0
Glyma.16G082300 Glycine max HOM05D007511 ORTHO05D003753 2.0e-20 102.8 119 52.1
Glyma.03G092200 Glycine max HOM05D007511 ORTHO05D003753 4.4e-20 101.7 120 50.0
TWI60G1247 Tripterygium wilfordii HOM05D007511 ORTHO05D003753 1.1e-15 87.0 119 42.0
TPR.G24583 Trifolium pratense HOM05D007511 ORTHO05D003753 2.5e-15 85.9 129 42.6
TWI34G0987 Tripterygium wilfordii HOM05D007511 ORTHO05D003753 4.2e-15 85.1 139 40.3
Lj3g0008746 Lotus japonicus HOM05D007511 ORTHO05D003753 5.2e-13 78.2 68 55.9
Ca_23172_v3 Cicer arietinum L. HOM05D007511 ORTHO05D003753 8.8e-13 77.4 68 51.5
Lalb_Chr07g0194541 Lupinus albus HOM05D007511 ORTHO05D003753 1.5e-12 76.6 63 54.0
Medtr8g011160 Medicago truncatula HOM05D007511 ORTHO05D003753 4.4e-12 75.1 117 38.5
Duzib177G0499 Durio zibethinus HOM05D007511 ORTHO05D003753 9.8e-12 73.9 90 45.6
Ciclev10033674m.g Citrus clementina HOM05D007511 ORTHO05D003753 1.3e-11 73.6 75 41.3
Psat0s409g0080 Pisum sativum HOM05D007511 ORTHO05D003753 2.2e-11 72.8 62 53.2
Thhalv10015688m.g Eutrema salsugineum HOM05D007511 ORTHO05D003753 4.8e-11 71.6 63 52.4
Potri.019G043701 Populus trichocarpa HOM05D007511 ORTHO05D003753 8.3e-11 70.9 129 35.7
Sp6g26630 Schrenkiella parvula HOM05D007511 ORTHO05D003753 8.3e-11 70.9 63 50.8
Aa31LG11G12060 Aethionema arabicum HOM05D007511 ORTHO05D003753 1.4e-10 70.1 63 52.4
Manes.08G158000 Manihot esculenta HOM05D007511 ORTHO05D003753 1.4e-10 70.1 76 46.1
BcaB08g36759 Brassica carinata HOM05D007511 ORTHO05D003753 2.4e-10 69.3 65 53.8
Psat4g207240 Pisum sativum HOM05D007511 ORTHO05D003753 2.4e-10 69.3 67 47.8
Prupe.2G098000 Prunus persica HOM05D007511 ORTHO05D003753 3.1e-10 68.9 114 37.7
BcaC04g18776 Brassica carinata HOM05D007511 ORTHO05D003753 5.4e-10 68.2 63 54.0
A10p21820 Brassica napus HOM05D007511 ORTHO05D003753 5.4e-10 68.2 63 54.0
C09p59570 Brassica napus HOM05D007511 ORTHO05D003753 5.4e-10 68.2 63 54.0
BolC9t58796H Brassica oleracea HOM05D007511 ORTHO05D003753 5.4e-10 68.2 63 54.0
BraA10t44242Z Brassica rapa HOM05D007511 ORTHO05D003753 5.4e-10 68.2 63 54.0
MD07G1077000 Malus domestica HOM05D007511 ORTHO05D003753 5.4e-10 68.2 91 42.9
C02p09200 Brassica napus HOM05D007511 ORTHO05D003753 7.0e-10 67.8 63 50.8
CARHR195590 Cardamine hirsuta HOM05D007511 ORTHO05D003753 7.0e-10 67.8 63 49.2
Sabra19G0054300 Salix brachista HOM05D007511 ORTHO05D003753 9.1e-10 67.4 132 40.2
MBI06_g35216_MAGBIO Magnolia biondii HOM05D007511 ORTHO05D003753 1.2e-09 67.0 66 45.5
AT5G17590 Arabidopsis thaliana HOM05D007511 ORTHO05D003753 2.0e-09 66.2 63 50.8
BcaC03g13529 Brassica carinata HOM05D007511 ORTHO05D003753 2.0e-09 66.2 63 49.2
A02p04350 Brassica napus HOM05D007511 ORTHO05D003753 2.0e-09 66.2 63 49.2
BolC2t06828H Brassica oleracea HOM05D007511 ORTHO05D003753 2.0e-09 66.2 63 49.2
BraA02t05399Z Brassica rapa HOM05D007511 ORTHO05D003753 2.0e-09 66.2 63 49.2
Carub.0006s1583 Capsella rubella HOM05D007511 ORTHO05D003753 2.0e-09 66.2 63 49.2
Eucgr.D00980 Eucalyptus grandis HOM05D007511 ORTHO05D003753 2.0e-09 66.2 67 46.3
Atru.chr2.1724 Acer truncatum HOM05D007511 ORTHO05D003753 2.7e-09 65.9 62 50.0
AL6G28680 Arabidopsis lyrata HOM05D007511 ORTHO05D003753 2.7e-09 65.9 63 49.2
Duzib128G1432 Durio zibethinus HOM05D007511 ORTHO05D003753 2.7e-09 65.9 90 42.2
SGA_v2.0_scaffold5G03086 Striga asiatica HOM05D007511 ORTHO05D003753 3.5e-09 65.5 109 33.9
Oeu024951.1 Olea europaea HOM05D007511 ORTHO05D003753 4.5e-09 65.1 69 44.9
TAR629G3237 Trochodendron aralioides HOM05D007511 ORTHO05D003753 4.5e-09 65.1 63 49.2
Cfa000931 Carpinus fangiana HOM05D007511 ORTHO05D003753 5.9e-09 64.7 67 47.8
Nn1g09148 Nelumbo nucifera HOM05D007511 ORTHO05D003753 5.9e-09 64.7 67 46.3
Oeu032775.1 Olea europaea HOM05D007511 ORTHO05D003753 7.7e-09 64.3 69 44.9
BolC3t13471H Brassica oleracea HOM05D007511 ORTHO05D003753 1.7e-08 63.2 65 47.7
THA.LOC104802898 Tarenaya hassleriana HOM05D007511 ORTHO05D003753 1.7e-08 63.2 63 44.4
PSO782G3115 Papaver somniferum HOM05D007511 ORTHO05D003753 2.2e-08 62.8 135 31.9
PSO063G5504 Papaver somniferum HOM05D007511 ORTHO05D003753 2.9e-08 62.4 69 46.4
Sed0019168 Sechium edule HOM05D007511 ORTHO05D003753 5.0e-08 61.6 107 34.6
Gohir.D11G235550 Gossypium hirsutum HOM05D007511 ORTHO05D003753 6.5e-08 61.2 65 41.5
Gorai.007G248300 Gossypium raimondii HOM05D007511 ORTHO05D003753 6.5e-08 61.2 65 41.5
PGR004G1271 Punica granatum HOM05D007511 ORTHO05D003753 6.5e-08 61.2 69 44.9
BcaB01g05209 Brassica carinata HOM05D007511 ORTHO05D003753 8.5e-08 60.8 65 46.2
A03p08430 Brassica napus HOM05D007511 ORTHO05D003753 8.5e-08 60.8 65 46.2
C03p09830 Brassica napus HOM05D007511 ORTHO05D003753 8.5e-08 60.8 65 46.2
BraA03t10166Z Brassica rapa HOM05D007511 ORTHO05D003753 8.5e-08 60.8 65 46.2
FAN01G1810 Fragaria x ananassa HOM05D007511 ORTHO05D003753 8.5e-08 60.8 68 44.1
FAN03G1709 Fragaria x ananassa HOM05D007511 ORTHO05D003753 8.5e-08 60.8 104 34.6
MD02G1239600 Malus domestica HOM05D007511 ORTHO05D003753 8.5e-08 60.8 102 36.3
CANSAT35G2046 Cannabis sativa HOM05D007511 ORTHO05D003753 1.1e-07 60.5 65 46.2
FvH4_7g07110 Fragaria vesca HOM05D007511 ORTHO05D003753 1.1e-07 60.5 68 44.1
FAN06G3938 Fragaria x ananassa HOM05D007511 ORTHO05D003753 1.1e-07 60.5 68 44.1
Aqoxy5G00551 Aquilegia oxysepala HOM05D007511 ORTHO05D003753 1.5e-07 60.1 108 35.2
Nn1g08946 Nelumbo nucifera HOM05D001418 ORTHO05D003753 1.9e-07 59.7 63 46.0
TAR381G0240 Trochodendron aralioides HOM05D001418 ORTHO05D004504 1.9e-07 59.7 74 41.9
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 3.2e-07 58.9 63 44.4
Migut.B01440 Erythranthe guttata HOM05D007511 ORTHO05D003753 4.2e-07 58.5 78 37.2
RcHm_v2.0_Chr1g0337051 Rosa chinensis HOM05D007511 ORTHO05D003753 5.5e-07 58.2 68 44.1
CiPaw.02G046500 Carya illinoinensis HOM05D007511 ORTHO05D003753 9.4e-07 57.4 129 31.0
Gohir.A11G221900 Gossypium hirsutum HOM05D007511 ORTHO05D003753 9.4e-07 57.4 65 40.0
CsaV3_2G011030 Cucumis sativus L. HOM05D007511 ORTHO05D003753 1.2e-06 57.0 68 39.7
TAR625G0656 Trochodendron aralioides HOM05D001418 ORTHO05D003753 1.6e-06 56.6 73 37.0
Nn3g19224 Nelumbo nucifera HOM05D007511 ORTHO05D003753 4.7e-06 55.1 63 44.4
Cpa.g.sc73.86 Carica papaya HOM05D007511 ORTHO05D003753 8.0e-06 54.3 68 42.6


User provided reference genes

Program Settings