Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G031000 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 1.5e-55 219.2 105 100.0
VMungo0331G0069 Vigna mungo HOM05D006940 ORTHO05D008626 8.2e-49 196.8 107 90.7
TPR.G26809 Trifolium pratense HOM05D006940 ORTHO05D008626 3.1e-32 141.7 103 63.1
Lj1g0019270 Lotus japonicus HOM05D006940 ORTHO05D008626 5.3e-32 141.0 103 64.1
Psat0s1437g0080 Pisum sativum HOM05D006940 ORTHO05D008626 5.3e-32 141.0 104 65.4
Lalb_Chr21g0315011 Lupinus albus HOM05D006940 ORTHO05D008626 1.2e-31 139.8 103 64.1
Glyma.08G345100 Glycine max HOM05D006940 ORTHO05D008626 4.5e-31 137.9 104 65.4
Phvul.008G137700 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 5.9e-31 137.5 103 63.1
Medtr7g052120 Medicago truncatula HOM05D006940 ORTHO05D008626 7.7e-31 137.1 103 63.1
Glyma.18G152800 Glycine max HOM05D006940 ORTHO05D008626 1.3e-30 136.3 103 63.1
Lalb_Chr03g0041181 Lupinus albus HOM05D006940 ORTHO05D008626 9.4e-29 130.2 103 59.2
Psat0s4060g0200 Pisum sativum HOM05D006940 ORTHO05D008626 3.0e-27 125.2 105 58.1
TPR.G2024 Trifolium pratense HOM05D006940 ORTHO05D008626 3.0e-27 125.2 78 70.5
Dinv28817 Davidia involucrata HOM05D006940 ORTHO05D008626 5.7e-26 120.9 104 57.7
TAR365G0827 Trochodendron aralioides HOM05D006940 ORTHO05D008626 5.7e-26 120.9 98 60.2
arahy.Tifrunner.gnm1.ann1.ZA5GY6 Arachis hypogaea HOM05D006940 ORTHO05D008626 1.7e-25 119.4 105 59.0
CiPaw.14G043100 Carya illinoinensis HOM05D006940 ORTHO05D008626 1.7e-25 119.4 110 55.5
vmacro02811 Vaccinium macrocarpon HOM05D006940 ORTHO05D008626 1.7e-25 119.4 85 65.9
Duzib133G0939 Durio zibethinus HOM05D006940 ORTHO05D008626 4.8e-25 117.9 105 58.1
Thecc.01G212400 Theobroma cacao HOM05D006940 ORTHO05D008626 6.3e-25 117.5 104 54.8
QL09p045850 Quercus lobata HOM05D006940 ORTHO05D008626 8.2e-25 117.1 107 52.3
Rhsim13G0052100 Rhododendron simsii HOM05D006940 ORTHO05D008626 8.2e-25 117.1 69 73.9
Haze_03308 Corylus avellana HOM05D006940 ORTHO05D008626 1.1e-24 116.7 69 69.6
TWI36G1176 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 1.1e-24 116.7 101 57.4
Sopen08g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 1.4e-24 116.3 102 52.0
Gorai.N003800 Gossypium raimondii HOM05D006940 ORTHO05D008626 1.8e-24 115.9 104 52.9
Nitab4.5_0000038g0040 Nicotiana tabacum HOM05D006940 ORTHO05D008626 2.4e-24 115.5 105 52.4
CSS0001884 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 4.1e-24 114.8 110 53.6
Gohir.A07G159700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 5.3e-24 114.4 104 52.9
Gohir.D07G166700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 5.3e-24 114.4 104 52.9
Solyc08g066610.3 Solanum lycopersicum HOM05D006940 ORTHO05D008626 5.3e-24 114.4 102 51.0
RcHm_v2.0_Chr6g0283181 Rosa chinensis HOM05D006940 ORTHO05D008626 7.0e-24 114.0 104 53.8
Sabra02G0190300 Salix brachista HOM05D006940 ORTHO05D008626 7.0e-24 114.0 70 72.9
CSS0043498 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 9.1e-24 113.6 61 77.0
Manes.12G052500 Manihot esculenta HOM05D006940 ORTHO05D008626 9.1e-24 113.6 106 53.8
Nn1g08072 Nelumbo nucifera HOM05D006940 ORTHO05D008626 9.1e-24 113.6 111 50.5
Gohir.A07G197033 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.2e-23 113.2 64 76.6
Gohir.D07G203400 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.2e-23 113.2 64 76.6
Gorai.001G228900 Gossypium raimondii HOM05D006940 ORTHO05D008626 1.2e-23 113.2 64 76.6
MBI07_g41210_MAGBIO Magnolia biondii HOM05D006940 ORTHO05D008626 1.6e-23 112.8 71 70.4
Duzib211G0506 Durio zibethinus HOM05D006940 ORTHO05D008626 2.0e-23 112.5 105 53.3
Potri.002G249901 Populus trichocarpa HOM05D006940 ORTHO05D008626 2.0e-23 112.5 107 52.3
CsaV3_7G026610 Cucumis sativus L. HOM05D006940 ORTHO05D008626 2.7e-23 112.1 54 87.0
Manes.13G053500 Manihot esculenta HOM05D006940 ORTHO05D008626 2.7e-23 112.1 53 88.7
Duzib138G0498 Durio zibethinus HOM05D006940 ORTHO05D008626 3.5e-23 111.7 105 55.2
Gohir.A11G141800 Gossypium hirsutum HOM05D006940 ORTHO05D008626 3.5e-23 111.7 105 54.3
Gorai.007G158800 Gossypium raimondii HOM05D006940 ORTHO05D008626 3.5e-23 111.7 105 54.3
Nitab4.5_0003186g0010 Nicotiana tabacum HOM05D006940 ORTHO05D008626 3.5e-23 111.7 105 52.4
TWI75G1309 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 3.5e-23 111.7 61 80.3
Migut.D02467 Erythranthe guttata HOM05D006940 ORTHO05D008626 5.9e-23 110.9 107 56.1
FvH4_2g17950 Fragaria vesca HOM05D006940 ORTHO05D008626 5.9e-23 110.9 107 54.2
FAN15G1530 Fragaria x ananassa HOM05D006940 ORTHO05D008626 5.9e-23 110.9 107 54.2
Hma1.2p1_0781F.1_g216880 Hydrangea macrophylla HOM05D006940 ORTHO05D008626 5.9e-23 110.9 55 83.6
Nn7g37664 Nelumbo nucifera HOM05D006940 ORTHO05D008626 5.9e-23 110.9 96 56.2
Sopen09g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 5.9e-23 110.9 96 55.2
CiPaw.13G054100 Carya illinoinensis HOM05D006940 ORTHO05D008626 1.0e-22 110.2 63 76.2
TAR636G0441 Trochodendron aralioides HOM05D006940 ORTHO05D008626 1.0e-22 110.2 68 67.6
Gohir.D11G148100 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.3e-22 109.8 105 53.3
Prupe.8G192000 Prunus persica HOM05D006940 ORTHO05D008626 1.3e-22 109.8 113 47.8
Atru.chr6.1604 Acer truncatum HOM05D006940 ORTHO05D008626 2.2e-22 109.0 59 79.7
arahy.Tifrunner.gnm1.ann1.7YS827 Arachis hypogaea HOM05D006940 ORTHO05D008626 2.2e-22 109.0 100 57.0
Ciclev10033128m.g Citrus clementina HOM05D006940 ORTHO05D008626 2.2e-22 109.0 53 86.8
FAN24G1170 Fragaria x ananassa HOM05D006940 ORTHO05D008626 2.2e-22 109.0 107 53.3
FAN27G2163 Fragaria x ananassa HOM05D006940 ORTHO05D008626 2.2e-22 109.0 107 54.2
MD10G1153200 Malus domestica HOM05D006940 ORTHO05D008626 2.9e-22 108.6 106 54.7
PSO675G0779 Papaver somniferum HOM05D006940 ORTHO05D008626 2.9e-22 108.6 111 48.6
MD05G1163400 Malus domestica HOM05D006940 ORTHO05D008626 5.0e-22 107.8 113 51.3
Eucgr.K02098 Eucalyptus grandis HOM05D006940 ORTHO05D008626 6.5e-22 107.5 111 50.5
BcaB04g17733 Brassica carinata HOM05D006940 ORTHO05D008626 8.5e-22 107.1 51 88.2
A08p07220 Brassica napus HOM05D006940 ORTHO05D008626 8.5e-22 107.1 51 88.2
C08p08940 Brassica napus HOM05D006940 ORTHO05D008626 8.5e-22 107.1 51 88.2
BolC8t47738H Brassica oleracea HOM05D006940 ORTHO05D008626 8.5e-22 107.1 51 88.2
BraA08t32735Z Brassica rapa HOM05D006940 ORTHO05D008626 8.5e-22 107.1 51 88.2
MELO3C021111.2 Cucumis melo HOM05D006940 ORTHO05D008626 8.5e-22 107.1 96 57.3
Thhalv10026516m.g Eutrema salsugineum HOM05D006940 ORTHO05D008626 8.5e-22 107.1 49 89.8
PSO017G0530 Papaver somniferum HOM05D006940 ORTHO05D008626 8.5e-22 107.1 71 63.4
PGR044G1150 Punica granatum HOM05D006940 ORTHO05D008626 8.5e-22 107.1 105 54.3
Sp7g09835 Schrenkiella parvula HOM05D006940 ORTHO05D008626 8.5e-22 107.1 51 88.2
Cpa.g.sc8.85 Carica papaya HOM05D006940 ORTHO05D008626 1.1e-21 106.7 53 84.9
Sed0013755 Sechium edule HOM05D006940 ORTHO05D008626 1.1e-21 106.7 54 85.2
Sed0027137 Sechium edule HOM05D006940 ORTHO05D008626 1.1e-21 106.7 53 83.0
Carub.0007s2980 Capsella rubella HOM05D006940 ORTHO05D008626 1.9e-21 105.9 96 53.1
Aa31sc38G90 Aethionema arabicum HOM05D006940 ORTHO05D008626 2.5e-21 105.5 49 87.8
AL9U11560 Arabidopsis lyrata HOM05D006940 ORTHO05D008626 3.2e-21 105.1 96 53.1
COL.COLO4_06154 Corchorus olitorius HOM05D006940 ORTHO05D008626 3.2e-21 105.1 62 74.2
PGSC0003DMG400007740 Solanum tuberosum HOM05D006940 ORTHO05D008626 3.2e-21 105.1 102 50.0
CANSAT01G0416 Cannabis sativa HOM05D006940 ORTHO05D008626 4.2e-21 104.8 87 52.9
CANSAT01G0831 Cannabis sativa HOM05D006940 ORTHO05D008626 4.2e-21 104.8 87 52.9
CANSAT01G1056 Cannabis sativa HOM05D006940 ORTHO05D008626 4.2e-21 104.8 87 52.9
CARHR218280 Cardamine hirsuta HOM05D006940 ORTHO05D008626 4.2e-21 104.8 96 53.1
THA.LOC104818992 Tarenaya hassleriana HOM05D006940 ORTHO05D008626 4.2e-21 104.8 61 68.9
AT4G12970 Arabidopsis thaliana HOM05D006940 ORTHO05D008626 5.5e-21 104.4 96 53.1
MSTRG.18810 Avicennia marina HOM05D006940 ORTHO05D008626 7.2e-21 104.0 49 83.7
Oeu064661.1 Olea europaea HOM05D006940 ORTHO05D008626 1.6e-20 102.8 97 50.5
DCAR_012690 Daucus carota HOM05D000328 ORTHO05D008626 3.6e-20 101.7 77 59.7
SalBow6G3514 Salvia bowleyana HOM05D006940 ORTHO05D008626 3.6e-20 101.7 94 54.3
SalBow7G1139 Salvia bowleyana HOM05D006940 ORTHO05D008626 4.7e-20 101.3 49 81.6
GSVIVG01031691001 Vitis vinifera HOM05D006940 ORTHO05D008626 6.1e-20 100.9 47 83.0
Sc01g0005680 Simmondsia chinensis HOM05D006940 ORTHO05D008626 8.0e-20 100.5 51 82.4
MSTRG.20995 Avicennia marina HOM05D006940 ORTHO05D008626 2.3e-19 99.0 100 47.0
HanXRQChr08g0231211 Helianthus annuus HOM05D006940 ORTHO05D008626 2.3e-19 99.0 49 79.6
Lsat_1_v5_gn_9_16040 Lactuca sativa HOM05D006940 ORTHO05D008626 2.3e-19 99.0 49 81.6
MSTRG.12756 Avicennia marina HOM05D006940 ORTHO05D008626 5.2e-19 97.8 48 79.2
EL10Ac5g11605 Beta vulgaris HOM05D006940 ORTHO05D008626 5.2e-19 97.8 109 45.9
Lsat_1_v5_gn_8_97920 Lactuca sativa HOM05D006940 ORTHO05D008626 6.8e-19 97.4 49 77.6
Zm00001eb364920 Zea mays HOM05D006940 ORTHO05D008626 2.0e-18 95.9 63 63.5
Zm00001eb143570 Zea mays HOM05D006940 ORTHO05D008626 3.4e-18 95.1 65 60.0
Os01g0914400 Oryza sativa ssp. japonica HOM05D006940 ORTHO05D008626 5.7e-18 94.4 65 61.5
ATR0609G114 Amborella trichopoda HOM05D006940 ORTHO05D008626 9.8e-18 93.6 111 47.7
HanXRQChr16g0507861 Helianthus annuus HOM05D006940 ORTHO05D008626 1.3e-17 93.2 94 50.0
PGSC0003DMG400020111 Solanum tuberosum HOM05D006940 ORTHO05D008626 1.7e-17 92.8 61 70.5
AUR62042875 Chenopodium quinoa HOM05D006940 ORTHO05D008626 1.8e-16 89.4 74 51.4
HPP92_011792 Vanilla planifolia HOM05D006940 ORTHO05D008626 9.1e-16 87.0 79 50.6
SEGI_36325 Sequoiadendron giganteum HOM05D006940 ORTHO05D008626 1.2e-15 86.7 45 75.6
SMO351G0191 Selaginella moellendorffii HOM05D006940 ORTHO05D008626 2.2e-14 82.4 55 60.0
Zm00001eb174960 Zea mays HOM05D006940 ORTHO05D008626 5.0e-14 81.3 48 60.4


User provided reference genes

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