Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G023400 Phaseolus vulgaris HOM05D000092 ORTHO05D005910 6.5e-88 327.4 170 100.0
Medtr3g451150 Medicago truncatula HOM05D000092 ORTHO05D005910 6.8e-53 211.1 170 64.7
Medtr3g452250 Medicago truncatula HOM05D000092 ORTHO05D005910 6.8e-53 211.1 170 64.7
TPR.G34177 Trifolium pratense HOM05D000092 ORTHO05D005910 6.8e-53 211.1 174 63.2
TPR.G24935 Trifolium pratense HOM05D000092 ORTHO05D000042 5.7e-52 208.0 177 62.7
Psat5g155080 Pisum sativum HOM05D000092 ORTHO05D005910 7.5e-52 207.6 176 61.9
Medtr3g062400 Medicago truncatula HOM05D000092 ORTHO05D005910 8.3e-51 204.1 170 62.9
TPR.G5137 Trifolium pratense HOM05D000092 ORTHO05D005910 1.4e-50 203.4 188 61.2
Medtr0922s0020 Medicago truncatula HOM05D000092 ORTHO05D005910 1.8e-50 203.0 174 61.5
Medtr3g062340 Medicago truncatula HOM05D000092 ORTHO05D005910 3.2e-50 202.2 188 61.2
Ca_27780_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 7.0e-50 201.1 190 58.4
Medtr3g435040 Medicago truncatula HOM05D000092 ORTHO05D005910 7.0e-50 201.1 165 66.1
Medtr3g062140 Medicago truncatula HOM05D000092 ORTHO05D005910 1.9e-47 193.0 139 68.3
Medtr3g062180 Medicago truncatula HOM05D000092 ORTHO05D005910 1.9e-47 193.0 139 68.3
TPR.G35834 Trifolium pratense HOM05D000092 ORTHO05D005910 1.9e-47 193.0 190 58.4
Ca_14166_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 4.3e-47 191.8 190 55.8
Medtr3g062420 Medicago truncatula HOM05D000092 ORTHO05D005910 1.6e-46 189.9 148 65.5
Ca_15038_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 3.6e-46 188.7 183 56.8
Ca_15035_v3 Cicer arietinum L. HOM05D000092 ORTHO05D000042 6.8e-45 184.5 181 54.7
Ca_14170_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 8.9e-45 184.1 190 55.8
Medtr2g049960 Medicago truncatula HOM05D000092 ORTHO05D005910 8.9e-45 184.1 190 56.3
TPR.G5820 Trifolium pratense HOM05D000092 ORTHO05D005910 1.5e-44 183.3 177 57.6
Ca_30441_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 2.6e-44 182.6 190 55.8
Ca_14173_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 9.8e-44 180.6 190 55.3
Medtr3g466750 Medicago truncatula HOM05D000092 ORTHO05D005910 2.9e-43 179.1 190 53.2
TPR.G13544 Trifolium pratense HOM05D000092 ORTHO05D005910 1.9e-42 176.4 136 65.4
Psat5g150000 Pisum sativum HOM05D000092 ORTHO05D005910 4.1e-42 175.3 166 57.8
TPR.G20384 Trifolium pratense HOM05D000092 ORTHO05D005910 5.4e-42 174.9 161 56.5
Medtr3g062010 Medicago truncatula HOM05D000092 ORTHO05D000042 7.0e-42 174.5 182 54.9
Medtr3g027360 Medicago truncatula HOM05D000092 ORTHO05D005910 1.6e-41 173.3 129 66.7
Medtr3g062320 Medicago truncatula HOM05D000092 ORTHO05D005910 2.7e-41 172.6 178 53.9
TPR.G35609 Trifolium pratense HOM05D000092 ORTHO05D005910 1.3e-40 170.2 170 52.4
Ca_15039_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 2.5e-39 166.0 124 69.4
TPR.G15149 Trifolium pratense HOM05D000092 ORTHO05D005910 3.3e-39 165.6 171 53.2
Medtr3g464920 Medicago truncatula HOM05D000092 ORTHO05D000042 4.3e-39 165.2 167 52.1
TPR.G27793 Trifolium pratense HOM05D000092 ORTHO05D005910 7.3e-39 164.5 161 56.5
Ca_14165_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 9.5e-39 164.1 170 55.9
Ca_14011_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 2.1e-38 162.9 170 55.3
Medtr3g063010 Medicago truncatula HOM05D000092 ORTHO05D005910 1.2e-36 157.1 184 47.8
TPR.G20720 Trifolium pratense HOM05D000092 ORTHO05D005910 2.6e-36 156.0 129 63.6
Medtr3g464810 Medicago truncatula HOM05D000092 ORTHO05D000042 3.4e-36 155.6 151 53.6
Medtr3g062980 Medicago truncatula HOM05D000092 ORTHO05D005910 8.3e-35 151.0 178 51.7
Medtr3g464840 Medicago truncatula HOM05D000092 ORTHO05D005910 1.9e-34 149.8 173 49.7
VMungo0331G0363 Vigna mungo HOM05D000092 ORTHO05D000042 3.2e-34 149.1 109 63.3
Psat7g235480 Pisum sativum HOM05D000092 ORTHO05D005910 1.2e-33 147.1 151 55.0
Medtr3g464950 Medicago truncatula HOM05D000092 ORTHO05D000042 2.7e-33 146.0 184 47.3
Medtr3g464870 Medicago truncatula HOM05D000092 ORTHO05D005910 2.3e-32 142.9 149 54.4
TPR.G40621 Trifolium pratense HOM05D000092 ORTHO05D005910 3.0e-32 142.5 137 57.7
Medtr1147s0010 Medicago truncatula HOM05D000092 ORTHO05D005910 1.2e-30 137.1 157 51.6
Psat5g150040 Pisum sativum HOM05D000092 ORTHO05D005910 5.2e-29 131.7 96 67.7
Medtr3g069220 Medicago truncatula HOM05D000092 ORTHO05D005910 2.0e-28 129.8 102 62.7
Medtr3g048690 Medicago truncatula HOM05D000092 ORTHO05D000042 3.4e-28 129.0 92 70.7
Medtr2g451270 Medicago truncatula HOM05D000092 ORTHO05D005910 4.1e-26 122.1 190 43.2
Medtr3g062130 Medicago truncatula HOM05D000092 ORTHO05D005910 3.5e-25 119.0 175 41.7
Medtr2g023000 Medicago truncatula HOM05D000092 ORTHO05D005910 1.7e-24 116.7 137 48.9
Medtr7g026240 Medicago truncatula HOM05D000092 ORTHO05D005910 3.0e-24 115.9 127 52.0
TPR.G40185 Trifolium pratense HOM05D000092 ORTHO05D005910 3.1e-21 105.9 171 39.8
Psat5g155000 Pisum sativum HOM05D000092 ORTHO05D005910 1.5e-20 103.6 76 68.4
Psat5g149920 Pisum sativum HOM05D000092 ORTHO05D005910 6.4e-19 98.2 77 64.9
TPR.G23432 Trifolium pratense HOM05D000092 ORTHO05D005910 4.6e-17 92.0 105 50.5
TPR.G35072 Trifolium pratense HOM05D000092 ORTHO05D005910 7.8e-17 91.3 110 47.3
TPR.G39391 Trifolium pratense HOM05D000092 ORTHO05D005910 1.9e-15 86.7 67 65.7
arahy.Tifrunner.gnm1.ann1.CULB88 Arachis hypogaea HOM05D008660 ORTHO05D005910 1.8e-13 80.1 183 30.6
arahy.Tifrunner.gnm1.ann1.79SUWC Arachis hypogaea HOM05D000092 ORTHO05D011874 9.0e-13 77.8 183 30.1
TPR.G10936 Trifolium pratense HOM05D000092 ORTHO05D005910 7.6e-12 74.7 60 63.3
Medtr2g450490 Medicago truncatula HOM05D000092 ORTHO05D005910 4.2e-10 68.9 93 47.3
Medtr3g466550 Medicago truncatula HOM05D000092 ORTHO05D005910 4.2e-10 68.9 93 47.3
Medtr1g094040 Medicago truncatula HOM05D000092 ORTHO05D005910 1.9e-07 60.1 93 35.5
TPR.G8117 Trifolium pratense HOM05D027040 ORTHO05D036751 4.3e-07 58.9 124 31.5


User provided reference genes

Program Settings