Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G021800 Phaseolus vulgaris HOM05D006799 ORTHO05D008391 1.1e-105 386.7 202 100.0
VMungo0331G1591 Vigna mungo HOM05D006799 ORTHO05D008391 4.1e-89 331.6 204 84.8
Glyma.17G151300 Glycine max HOM05D006799 ORTHO05D008391 8.3e-82 307.4 205 79.5
Lj3g0009647 Lotus japonicus HOM05D006799 ORTHO05D008391 2.8e-77 292.4 208 74.0
TPR.G11194 Trifolium pratense HOM05D006799 ORTHO05D008391 1.2e-72 276.9 207 70.5
Lalb_Chr12g0209871 Lupinus albus HOM05D006799 ORTHO05D008391 5.9e-72 274.6 204 69.6
Medtr8g012725 Medicago truncatula HOM05D006799 ORTHO05D008391 2.9e-71 272.3 203 71.4
arahy.Tifrunner.gnm1.ann1.AR5NL3 Arachis hypogaea HOM05D006799 ORTHO05D008391 1.9e-70 269.6 202 69.3
arahy.Tifrunner.gnm1.ann1.H272JM Arachis hypogaea HOM05D006799 ORTHO05D008391 7.3e-70 267.7 202 68.8
Psat4g203520 Pisum sativum HOM05D006799 ORTHO05D008391 2.1e-69 266.2 199 68.3
Ca_23225_v3 Cicer arietinum L. HOM05D006799 ORTHO05D008391 5.0e-63 245.0 164 73.2
Haze_15251 Corylus avellana HOM05D006799 ORTHO05D008391 2.1e-56 223.0 192 60.4
Actinidia23709 Actinidia chinensis HOM05D006799 ORTHO05D008391 1.3e-55 220.3 189 60.3
QL09p051225 Quercus lobata HOM05D006799 ORTHO05D008391 2.3e-55 219.5 185 61.1
Gohir.D07G097800 Gossypium hirsutum HOM05D006799 ORTHO05D008391 3.0e-55 219.2 202 61.9
Dinv12648 Davidia involucrata HOM05D006799 ORTHO05D008391 3.9e-55 218.8 199 57.3
Gorai.001G105200 Gossypium raimondii HOM05D006799 ORTHO05D008391 3.9e-55 218.8 202 61.4
Thecc.01G219900 Theobroma cacao HOM05D006799 ORTHO05D008391 5.1e-55 218.4 188 63.3
Gohir.A07G093200 Gossypium hirsutum HOM05D006799 ORTHO05D008391 6.6e-55 218.0 202 60.4
Hma1.2p1_0226F.1_g095380 Hydrangea macrophylla HOM05D006799 ORTHO05D008391 2.5e-54 216.1 202 57.9
CSS0002557 Camellia sinensis var. sinensis HOM05D006799 ORTHO05D008391 7.3e-54 214.5 189 58.2
MD05G1171500 Malus domestica HOM05D006799 ORTHO05D008391 2.8e-53 212.6 195 53.8
TAR362G0955 Trochodendron aralioides HOM05D006799 ORTHO05D008391 2.8e-53 212.6 186 60.2
Cfa004160 Carpinus fangiana HOM05D006799 ORTHO05D008391 6.2e-53 211.5 216 54.2
MD10G1159700 Malus domestica HOM05D006799 ORTHO05D008391 6.2e-53 211.5 195 53.3
COL.COLO4_15616 Corchorus olitorius HOM05D006799 ORTHO05D008391 1.1e-52 210.7 202 59.4
Atru.chr6.1426 Acer truncatum HOM05D006799 ORTHO05D008391 1.4e-52 210.3 195 56.4
CiPaw.02G023800 Carya illinoinensis HOM05D006799 ORTHO05D008391 1.4e-52 210.3 200 56.0
Peaxi162Scf00068g02310 Petunia axillaris HOM05D006799 ORTHO05D008391 1.8e-52 209.9 196 59.2
Rhsim01G0253200 Rhododendron simsii HOM05D006799 ORTHO05D008391 1.8e-52 209.9 188 58.5
Duzib138G1661 Durio zibethinus HOM05D006799 ORTHO05D008391 2.3e-52 209.5 187 63.1
Lj1C89G17 Lonicera japonica HOM05D006799 ORTHO05D008391 4.0e-52 208.8 186 57.5
Sabra02G0187300 Salix brachista HOM05D006799 ORTHO05D008391 4.0e-52 208.8 202 55.4
Prupe.8G198800 Prunus persica HOM05D006799 ORTHO05D008391 5.2e-52 208.4 195 54.9
Sopen06g002680 Solanum pennellii HOM05D006799 ORTHO05D008391 5.2e-52 208.4 186 58.6
Solyc06g007800.4 Solanum lycopersicum HOM05D006799 ORTHO05D008391 6.8e-52 208.0 193 57.0
TWI18G0944 Tripterygium wilfordii HOM05D006799 ORTHO05D008391 8.9e-52 207.6 202 56.4
CAN.G181.54 Capsicum annuum HOM05D006799 ORTHO05D008391 2.6e-51 206.1 199 56.8
Potri.002G246000 Populus trichocarpa HOM05D006799 ORTHO05D008391 2.6e-51 206.1 202 57.4
Ciclev10022385m.g Citrus clementina HOM05D006799 ORTHO05D008391 4.4e-51 205.3 201 55.2
Manes.13G049500 Manihot esculenta HOM05D006799 ORTHO05D008391 7.6e-51 204.5 190 58.9
Cc01_g16700 Coffea canephora HOM05D006799 ORTHO05D008391 9.9e-51 204.1 204 57.8
RcHm_v2.0_Chr6g0284091 Rosa chinensis HOM05D006799 ORTHO05D008391 9.9e-51 204.1 199 52.8
FvH4_2g18530 Fragaria vesca HOM05D006799 ORTHO05D008391 1.7e-50 203.4 195 52.8
FAN24G0472 Fragaria x ananassa HOM05D004056 ORTHO05D008391 1.7e-50 203.4 195 52.8
PGSC0003DMG400022033 Solanum tuberosum HOM05D006799 ORTHO05D008391 2.9e-50 202.6 193 55.4
Nitab4.5_0000045g0540 Nicotiana tabacum HOM05D006799 ORTHO05D008391 3.7e-50 202.2 195 57.4
Dinv19171 Davidia involucrata HOM05D006799 ORTHO05D008391 8.3e-50 201.1 179 58.7
FAN15G2777 Fragaria x ananassa HOM05D004056 ORTHO05D008391 8.3e-50 201.1 195 52.3
Cpa.g.sc21.107 Carica papaya HOM05D006799 ORTHO05D008391 1.1e-49 200.7 184 59.2
Nitab4.5_0002641g0110 Nicotiana tabacum HOM05D006799 ORTHO05D008391 1.4e-49 200.3 197 55.8
GSVIVG01003251001 Vitis vinifera HOM05D006799 ORTHO05D008391 4.1e-49 198.7 200 54.5
PGR044G2699 Punica granatum HOM05D006799 ORTHO05D008391 1.6e-48 196.8 195 52.3
Sed0008494 Sechium edule HOM05D006799 ORTHO05D008391 2.1e-48 196.4 177 55.4
ClCG09G008610 Citrullus lanatus HOM05D006799 ORTHO05D008391 2.7e-48 196.1 180 56.7
Sc17g0002120 Simmondsia chinensis HOM05D006799 ORTHO05D008391 4.6e-48 195.3 198 58.1
Nitab4.5_0002616g0150 Nicotiana tabacum HOM05D006799 ORTHO05D008391 6.0e-48 194.9 205 54.1
Migut.N00632 Erythranthe guttata HOM05D006799 ORTHO05D008391 1.0e-47 194.1 199 52.8
Lsat_1_v5_gn_8_89340 Lactuca sativa HOM05D006799 ORTHO05D008391 1.0e-47 194.1 195 52.3
DCAR_012670 Daucus carota HOM05D006799 ORTHO05D008391 1.3e-47 193.7 199 52.8
SGA_v2.0_scaffold6G03220 Striga asiatica HOM05D006799 ORTHO05D008391 1.3e-47 193.7 200 55.5
CsaV3_7G026360 Cucumis sativus L. HOM05D006799 ORTHO05D008391 3.0e-47 192.6 184 53.8
MBI11_g07417_MAGBIO Magnolia biondii HOM05D006799 ORTHO05D008391 6.6e-47 191.4 187 54.0
Aqoxy5G00028 Aquilegia oxysepala HOM05D006799 ORTHO05D008391 1.5e-46 190.3 176 55.7
EL10Ac5g12475 Beta vulgaris HOM05D006799 ORTHO05D008391 1.5e-46 190.3 188 55.3
vmacro14734 Vaccinium macrocarpon HOM05D006799 ORTHO05D008391 1.5e-46 190.3 232 47.4
CANSAT01G3095 Cannabis sativa HOM05D006799 ORTHO05D008391 4.3e-46 188.7 193 53.4
MSTRG.17994 Avicennia marina HOM05D006799 ORTHO05D008391 2.1e-45 186.4 200 52.5
SalBow3G4070 Salvia bowleyana HOM05D006799 ORTHO05D008391 2.1e-45 186.4 208 49.0
ECA236G1739 Erigeron canadensis HOM05D006799 ORTHO05D008391 3.6e-45 185.7 196 51.5
MELO3C021082.2 Cucumis melo HOM05D006799 ORTHO05D008391 8.1e-45 184.5 193 51.8
Hund05578 Selenicereus undatus HOM05D006799 ORTHO05D008391 1.1e-44 184.1 203 51.2
Eucgr.K02137 Eucalyptus grandis HOM05D006799 ORTHO05D008391 5.8e-43 178.3 182 52.7
PSO063G5306 Papaver somniferum HOM05D006799 ORTHO05D008391 1.7e-42 176.8 185 50.8
AUR62019885 Chenopodium quinoa HOM05D006799 ORTHO05D008391 1.1e-41 174.1 186 52.7
CDE05G2155 Ceratophyllum demersum HOM05D006799 ORTHO05D008391 1.4e-41 173.7 177 50.8
AUR62007023 Chenopodium quinoa HOM05D006799 ORTHO05D008391 1.4e-41 173.7 186 52.2
HanXRQChr16g0500591 Helianthus annuus HOM05D006799 ORTHO05D008391 1.6e-40 170.2 196 50.5
unitig_0.g374 Utricularia gibba HOM05D006799 ORTHO05D008391 1.3e-39 167.2 182 50.0
THA.LOC104804623 Tarenaya hassleriana HOM05D006799 ORTHO05D008391 6.6e-39 164.9 195 49.2
Os04g0376100 Oryza sativa ssp. japonica HOM05D006799 ORTHO05D008391 1.3e-37 160.6 199 44.7
Aa31LG9G5010 Aethionema arabicum HOM05D006799 ORTHO05D008391 4.8e-37 158.7 197 47.2
BcaC06g35782 Brassica carinata HOM05D006799 ORTHO05D008391 1.8e-36 156.8 196 48.0
Carub.0003s2545 Capsella rubella HOM05D006799 ORTHO05D008391 3.1e-36 156.0 178 49.4
BraA07t28510Z Brassica rapa HOM05D006799 ORTHO05D008391 4.0e-36 155.6 196 48.0
CARHR101440 Cardamine hirsuta HOM05D006799 ORTHO05D008391 4.0e-36 155.6 193 47.2
A07p07240 Brassica napus HOM05D006799 ORTHO05D008391 5.3e-36 155.2 196 47.4
ATR0561G177 Amborella trichopoda HOM05D006799 ORTHO05D008391 2.0e-35 153.3 187 46.0
C07p10930 Brassica napus HOM05D006799 ORTHO05D008391 4.4e-35 152.1 197 47.7
BolC7t41559H Brassica oleracea HOM05D006799 ORTHO05D008391 4.4e-35 152.1 197 47.7
AT3G25120 Arabidopsis thaliana HOM05D006799 ORTHO05D008391 1.7e-34 150.2 174 48.9
Thhalv10002682m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 1.9e-33 146.7 198 44.9
arahy.Tifrunner.gnm1.ann1.9RT6YB Arachis hypogaea HOM05D006799 ORTHO05D008391 2.4e-33 146.4 109 69.7
AL3G40810 Arabidopsis lyrata HOM05D006799 ORTHO05D008391 3.2e-33 146.0 200 44.0
Ah.12g052960 Amaranthus hybridus HOM05D006799 ORTHO05D008391 7.1e-33 144.8 186 47.3
CARHR218390 Cardamine hirsuta HOM05D006799 ORTHO05D008391 9.3e-33 144.4 185 46.5
Sp3g22710 Schrenkiella parvula HOM05D006799 ORTHO05D008391 1.2e-32 144.1 195 44.1
Zm00001eb086040 Zea mays HOM05D006799 ORTHO05D008391 1.6e-32 143.7 165 47.9
BcaC02g09450 Brassica carinata HOM05D006799 ORTHO05D008391 7.8e-32 141.4 205 43.9
BcaB03g16157 Brassica carinata HOM05D006799 ORTHO05D008391 1.3e-31 140.6 195 45.1
C04p42860 Brassica napus HOM05D006799 ORTHO05D008391 3.0e-31 139.4 199 44.2
BolC4t25853H Brassica oleracea HOM05D006799 ORTHO05D008391 1.1e-30 137.5 202 43.1
A04p08990 Brassica napus HOM05D006799 ORTHO05D008391 2.5e-30 136.3 205 43.4
BraA04t16594Z Brassica rapa HOM05D006799 ORTHO05D008391 2.5e-30 136.3 205 43.4
BcaB06g26722 Brassica carinata HOM05D006799 ORTHO05D008391 1.6e-29 133.7 188 43.6
FAN27G1455 Fragaria x ananassa HOM05D006799 ORTHO05D008391 2.8e-29 132.9 125 52.8
Peaxi162Scf00372g01214 Petunia axillaris HOM05D006799 ORTHO05D008391 3.1e-28 129.4 111 62.2
Sc17g0002130 Simmondsia chinensis HOM05D006799 ORTHO05D008391 8.4e-26 121.3 107 59.8
SEGI_12663 Sequoiadendron giganteum HOM05D006799 ORTHO05D008391 4.2e-25 119.0 186 39.8
Thhalv10026882m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 4.6e-24 115.5 183 39.9
Mapoly0010s0131 Marchantia polymorpha HOM05D006799 ORTHO05D008391 6.0e-16 88.6 188 34.0
Pp3c22_13870 Physcomitrium patens HOM05D006799 ORTHO05D008391 6.7e-15 85.1 185 31.9
Rhsim01G0253100 Rhododendron simsii HOM05D006799 ORTHO05D008391 6.7e-15 85.1 100 45.0
AagrBONN_evm.TU.Sc2ySwM_228.181 Anthoceros agrestis HOM05D006799 ORTHO05D008391 1.1e-14 84.3 188 33.0
Ca_19566_v3 Cicer arietinum L. HOM05D006799 ORTHO05D008391 5.0e-10 68.9 39 82.1
CBR_g52029 Chara braunii HOM05D006799 ORTHO05D008391 1.4e-09 67.4 116 37.1
SMO337G0092 Selaginella moellendorffii HOM05D006799 ORTHO05D008391 1.0e-07 61.2 184 28.3


User provided reference genes

Program Settings