Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G021300 Phaseolus vulgaris HOM05D005989 ORTHO05D000022 3.5e-51 204.5 93 100.0
RcHm_v2.0_Chr4g0409421 Rosa chinensis HOM05D005989 ORTHO05D000022 1.2e-11 73.2 60 50.0
RcHm_v2.0_Chr6g0278601 Rosa chinensis HOM05D000003 ORTHO05D000004 2.1e-11 72.4 71 46.5
Glyma.13G358333 Glycine max HOM05D005989 ORTHO05D000022 3.5e-11 71.6 63 50.8
Lalb_Chr08g0232201 Lupinus albus HOM05D005989 ORTHO05D000022 3.5e-11 71.6 64 51.6
TPR.G13740 Trifolium pratense HOM05D005989 ORTHO05D000022 5.1e-10 67.8 63 44.4
Prupe.4G283800 Prunus persica HOM05D005989 ORTHO05D000651 1.1e-09 66.6 60 45.0
RcHm_v2.0_Chr2g0167951 Rosa chinensis HOM05D005989 ORTHO05D000022 1.9e-09 65.9 62 48.4
FvH4_3g24991 Fragaria vesca HOM05D005989 ORTHO05D000022 5.6e-09 64.3 72 38.9
Medtr1g083630 Medicago truncatula HOM05D000008 ORTHO05D000005 1.6e-08 62.8 52 46.2
Psat2g155160 Pisum sativum HOM05D005989 ORTHO05D000022 2.8e-08 62.0 72 38.9
TPR.G36653 Trifolium pratense HOM05D000003 ORTHO05D000006 2.8e-08 62.0 60 48.3
Atru.chr2.2454 Acer truncatum HOM05D005989 ORTHO05D000022 4.8e-08 61.2 63 42.9
Atru.chr5.1911 Acer truncatum HOM05D005989 ORTHO05D000022 4.8e-08 61.2 67 43.3
RcHm_v2.0_Chr1g0316991 Rosa chinensis HOM05D005989 ORTHO05D000022 4.8e-08 61.2 60 43.3
RcHm_v2.0_Chr3g0465511 Rosa chinensis HOM05D000155 ORTHO05D000022 4.8e-08 61.2 78 41.0
RcHm_v2.0_Chr7g0185631 Rosa chinensis HOM05D000155 ORTHO05D000022 4.8e-08 61.2 78 41.0
Atru.chr10.504 Acer truncatum HOM05D000003 ORTHO05D000022 6.2e-08 60.8 67 43.3
RcHm_v2.0_Chr2g0120021 Rosa chinensis HOM05D005989 ORTHO05D000022 6.2e-08 60.8 60 43.3
RcHm_v2.0_Chr5g0000531 Rosa chinensis HOM05D000985 ORTHO05D011902 6.2e-08 60.8 69 39.1
TPR.G6692 Trifolium pratense HOM05D005989 ORTHO05D000022 6.2e-08 60.8 60 45.0
Atru.chr1.2142 Acer truncatum HOM05D000003 ORTHO05D000022 8.1e-08 60.5 67 43.3
RcHm_v2.0_Chr3g0453641 Rosa chinensis HOM05D000003 ORTHO05D000004 8.1e-08 60.5 62 45.2
RcHm_v2.0_Chr7g0206171 Rosa chinensis HOM05D005989 ORTHO05D000022 1.1e-07 60.1 61 42.6
Atru.chr9.192 Acer truncatum HOM05D005989 ORTHO05D000022 1.4e-07 59.7 67 43.3
Prupe.1G484600 Prunus persica HOM05D005989 ORTHO05D000022 1.8e-07 59.3 71 39.4
TPR.G23861 Trifolium pratense HOM05D005989 ORTHO05D000022 1.8e-07 59.3 63 36.5
RcHm_v2.0_Chr1g0352021 Rosa chinensis HOM05D005989 ORTHO05D000022 3.1e-07 58.5 61 41.0
RcHm_v2.0_Chr2g0160431 Rosa chinensis HOM05D000003 ORTHO05D000004 3.1e-07 58.5 62 43.5
RcHm_v2.0_Chr3g0462451 Rosa chinensis HOM05D005989 ORTHO05D000022 3.1e-07 58.5 62 43.5
RcHm_v2.0_Chr6g0264461 Rosa chinensis HOM05D005989 ORTHO05D000022 3.1e-07 58.5 61 41.0
Psat1g101960 Pisum sativum HOM05D000003 ORTHO05D000007 4.0e-07 58.2 60 43.3
Atru.chr1.1636 Acer truncatum HOM05D005989 ORTHO05D000022 5.3e-07 57.8 63 41.3
MD07G1021300 Malus domestica HOM05D000155 ORTHO05D000022 5.3e-07 57.8 62 40.3
RcHm_v2.0_Chr2g0133661 Rosa chinensis HOM05D000155 ORTHO05D000022 5.3e-07 57.8 64 37.5
RcHm_v2.0_Chr7g0184971 Rosa chinensis HOM05D005989 ORTHO05D000022 5.3e-07 57.8 65 38.5
TPR.G15449 Trifolium pratense HOM05D005989 ORTHO05D000022 5.3e-07 57.8 64 40.6
Atru.chr2.1816 Acer truncatum HOM05D000003 ORTHO05D000022 6.9e-07 57.4 67 41.8
Atru.chr2.2552 Acer truncatum HOM05D005989 ORTHO05D000022 6.9e-07 57.4 64 35.9
Psat0s1775g0320 Pisum sativum HOM05D005989 ORTHO05D000022 9.0e-07 57.0 77 36.4
Phvul.004G137000 Phaseolus vulgaris HOM05D005989 ORTHO05D000022 1.2e-06 56.6 71 33.8
TPR.G3914 Trifolium pratense HOM05D005989 ORTHO05D000022 1.5e-06 56.2 61 44.3
Lalb_Chr21g0306271 Lupinus albus HOM05D005989 ORTHO05D000022 2.0e-06 55.8 70 41.4
MD02G1050700 Malus domestica HOM05D000155 ORTHO05D000022 2.0e-06 55.8 62 40.3
Medtr2g022360 Medicago truncatula HOM05D005989 ORTHO05D000022 2.0e-06 55.8 51 39.2
PSO541G4268 Papaver somniferum HOM05D005989 ORTHO05D000022 2.0e-06 55.8 64 37.5
Medtr3g092860 Medicago truncatula HOM05D005989 ORTHO05D000022 2.6e-06 55.5 50 44.0
Lalb_Chr02g0160271 Lupinus albus HOM05D005989 ORTHO05D000022 4.4e-06 54.7 77 35.1
Aqoxy2G01511 Aquilegia oxysepala HOM05D000155 ORTHO05D000022 5.8e-06 54.3 66 31.8
Lalb_Chr18g0052711 Lupinus albus HOM05D005989 ORTHO05D000022 5.8e-06 54.3 62 37.1
RcHm_v2.0_Chr5g0077831 Rosa chinensis HOM05D005989 ORTHO05D011902 7.6e-06 53.9 61 39.3
TPR.G37438 Trifolium pratense HOM05D005989 ORTHO05D000022 7.6e-06 53.9 64 39.1
FvH4_5g27541 Fragaria vesca HOM05D005989 ORTHO05D000022 9.9e-06 53.5 58 39.7
Lalb_Chr23g0276181 Lupinus albus HOM05D005989 ORTHO05D000022 9.9e-06 53.5 64 39.1
Medtr8g479410 Medicago truncatula HOM05D005989 ORTHO05D000022 9.9e-06 53.5 50 40.0


User provided reference genes

Program Settings