Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G020400 Phaseolus vulgaris HOM05D007399 ORTHO05D009341 5.0e-143 511.1 266 100.0
VMungo0331G1622 Vigna mungo HOM05D007399 ORTHO05D009341 3.9e-79 298.9 218 73.9
Glyma.16G101000 Glycine max HOM05D007399 ORTHO05D009341 1.2e-72 277.3 219 66.7
Medtr8g013040 Medicago truncatula HOM05D007399 ORTHO05D009341 1.5e-67 260.4 228 63.2
TPR.G17137 Trifolium pratense HOM05D007399 ORTHO05D009341 4.2e-65 252.3 228 61.0
arahy.Tifrunner.gnm1.ann1.5JJB2W Arachis hypogaea HOM05D007399 ORTHO05D009341 1.1e-60 237.7 255 53.3
Psat4g199960 Pisum sativum HOM05D007399 ORTHO05D009341 1.1e-60 237.7 228 58.3
Lj3g0000647 Lotus japonicus HOM05D007399 ORTHO05D009341 1.6e-56 223.8 220 56.4
QL09p052198 Quercus lobata HOM05D007399 ORTHO05D009341 4.6e-56 222.2 220 55.9
Lalb_Chr12g0209951 Lupinus albus HOM05D007399 ORTHO05D009341 1.8e-55 220.3 199 61.8
Manes.13G046300 Manihot esculenta HOM05D007399 ORTHO05D009341 1.1e-52 211.1 222 52.7
arahy.Tifrunner.gnm1.ann1.YE6SLX Arachis hypogaea HOM05D007399 ORTHO05D009341 2.4e-52 209.9 224 53.6
Prupe.8G200700 Prunus persica HOM05D007399 ORTHO05D009341 6.4e-50 201.8 228 50.9
Thecc.01G222700 Theobroma cacao HOM05D007399 ORTHO05D009341 2.7e-48 196.4 234 49.1
Dinv19187 Davidia involucrata HOM05D007399 ORTHO05D009341 3.5e-48 196.1 232 48.7
Ciclev10022115m.g Citrus clementina HOM05D007399 ORTHO05D009341 2.5e-46 189.9 222 50.5
Nitab4.5_0000045g0320 Nicotiana tabacum HOM05D007399 ORTHO05D009341 2.1e-45 186.8 211 49.3
Cfa002599 Carpinus fangiana HOM05D007399 ORTHO05D009341 6.9e-44 181.8 216 50.5
Cc01_g16850 Coffea canephora HOM05D007399 ORTHO05D009341 6.9e-44 181.8 223 47.1
Duzib133G1013 Durio zibethinus HOM05D007399 ORTHO05D009341 6.9e-44 181.8 220 48.2
Peaxi162Scf00398g00810 Petunia axillaris HOM05D007399 ORTHO05D009341 1.2e-43 181.0 221 45.7
COL.COLO4_15647 Corchorus olitorius HOM05D007399 ORTHO05D009341 3.4e-43 179.5 237 48.5
Haze_24850 Corylus avellana HOM05D007399 ORTHO05D009341 1.0e-42 177.9 175 56.6
Gohir.A11G139200 Gossypium hirsutum HOM05D007399 ORTHO05D009341 1.7e-42 177.2 237 46.0
QL09p053453 Quercus lobata HOM05D007399 ORTHO05D009341 2.9e-42 176.4 226 48.7
MD05G1173200 Malus domestica HOM05D007399 ORTHO05D009341 3.8e-42 176.0 220 48.2
FvH4_2g18740 Fragaria vesca HOM05D007399 ORTHO05D009341 4.9e-42 175.6 230 47.4
RcHm_v2.0_Chr6g0284361 Rosa chinensis HOM05D007399 ORTHO05D009341 4.9e-42 175.6 223 50.2
Nitab4.5_0000345g0070 Nicotiana tabacum HOM05D007399 ORTHO05D009341 8.4e-42 174.9 211 46.0
Gohir.D11G145400 Gossypium hirsutum HOM05D007399 ORTHO05D009341 1.4e-41 174.1 241 44.0
Hund05568 Selenicereus undatus HOM05D007399 ORTHO05D009341 1.4e-41 174.1 223 45.3
TWI18G0746 Tripterygium wilfordii HOM05D007399 ORTHO05D009341 1.4e-41 174.1 219 47.9
Lj2A1128G40 Lonicera japonica HOM05D007399 ORTHO05D009341 1.9e-41 173.7 197 48.2
FAN15G3119 Fragaria x ananassa HOM05D007399 ORTHO05D009341 2.5e-41 173.3 229 47.6
Ah.08g214480 Amaranthus hybridus HOM05D007399 ORTHO05D009341 2.1e-40 170.2 236 44.1
FAN27G2185 Fragaria x ananassa HOM05D007399 ORTHO05D009341 3.5e-40 169.5 230 46.5
Gorai.007G155900 Gossypium raimondii HOM05D007399 ORTHO05D009341 7.9e-40 168.3 245 42.4
CAN.G3.2 Capsicum annuum HOM05D007399 ORTHO05D009341 1.0e-39 167.9 212 47.6
TAR362G0473 Trochodendron aralioides HOM05D007399 ORTHO05D009341 2.3e-39 166.8 221 46.2
Carub.0003s0667 Capsella rubella HOM05D007399 ORTHO05D009341 5.1e-39 165.6 215 47.4
PGSC0003DMG401023104 Solanum tuberosum HOM05D007399 ORTHO05D009341 2.5e-38 163.3 233 43.8
ClCG09G008880 Citrullus lanatus HOM05D007399 ORTHO05D009341 3.3e-38 162.9 227 45.8
MELO3C021053.2 Cucumis melo HOM05D007399 ORTHO05D009341 7.4e-38 161.8 227 47.1
AL3G18400 Arabidopsis lyrata HOM05D007399 ORTHO05D009341 9.7e-38 161.4 226 44.2
ECA248G2789 Erigeron canadensis HOM05D007399 ORTHO05D009341 9.7e-38 161.4 220 46.8
PGR083G1511 Punica granatum HOM05D007399 ORTHO05D009341 9.7e-38 161.4 227 45.4
Solyc09g059950.3 Solanum lycopersicum HOM05D007399 ORTHO05D009341 9.7e-38 161.4 233 42.1
QL09p053062 Quercus lobata HOM05D007399 ORTHO05D009341 1.6e-37 160.6 146 56.8
Sopen09g023130 Solanum pennellii HOM05D007399 ORTHO05D009341 1.6e-37 160.6 233 42.1
CsaV3_7G026010 Cucumis sativus L. HOM05D007399 ORTHO05D009341 2.2e-37 160.2 227 47.1
FAN24G1833 Fragaria x ananassa HOM05D007399 ORTHO05D009341 2.2e-37 160.2 229 45.4
AT3G07150 Arabidopsis thaliana HOM05D007399 ORTHO05D009341 2.8e-37 159.8 229 45.4
Aa31LG5G17710 Aethionema arabicum HOM05D007399 ORTHO05D009341 4.8e-37 159.1 222 45.0
Nn1g07919 Nelumbo nucifera HOM05D007399 ORTHO05D009341 2.4e-36 156.8 142 55.6
Migut.D02494 Erythranthe guttata HOM05D007399 ORTHO05D009341 3.1e-36 156.4 220 43.2
BraA05t22833Z Brassica rapa HOM05D007399 ORTHO05D009341 9.0e-36 154.8 216 44.0
HanXRQChr01g0015211 Helianthus annuus HOM05D007399 ORTHO05D009341 9.0e-36 154.8 209 45.5
C05p60230 Brassica napus HOM05D007399 ORTHO05D009341 1.2e-35 154.5 216 43.5
BcaC05g29843 Brassica carinata HOM05D007399 ORTHO05D009341 1.5e-35 154.1 215 43.3
A05p41060 Brassica napus HOM05D007399 ORTHO05D009341 1.5e-35 154.1 216 44.0
Rhsim01G0254900 Rhododendron simsii HOM05D007399 ORTHO05D009341 2.0e-35 153.7 288 39.9
Eucgr.H00781 Eucalyptus grandis HOM05D007399 ORTHO05D009341 2.6e-35 153.3 222 41.4
Potri.002G244400 Populus trichocarpa HOM05D007399 ORTHO05D009341 2.6e-35 153.3 148 53.4
GSVIVG01003279001 Vitis vinifera HOM05D007399 ORTHO05D009341 5.9e-35 152.1 247 41.7
BolC5t34673H Brassica oleracea HOM05D007399 ORTHO05D009341 1.7e-34 150.6 216 42.6
AUR62001112 Chenopodium quinoa HOM05D007399 ORTHO05D009341 1.7e-34 150.6 213 46.5
Cpa.g.sc8.134 Carica papaya HOM05D007399 ORTHO05D009341 2.9e-34 149.8 142 52.8
Sed0009642 Sechium edule HOM05D007399 ORTHO05D009341 3.8e-34 149.4 230 41.7
CiPaw.03G147600 Carya illinoinensis HOM05D007399 ORTHO05D009341 5.0e-34 149.1 174 48.9
Actinidia09475 Actinidia chinensis HOM05D007399 ORTHO05D009341 8.5e-34 148.3 192 45.3
Sabra02G0185900 Salix brachista HOM05D007399 ORTHO05D009341 1.9e-33 147.1 164 48.2
Oeu037382.1 Olea europaea HOM05D007399 ORTHO05D009341 4.2e-33 146.0 174 47.7
Lsat_1_v5_gn_5_180581 Lactuca sativa HOM05D007399 ORTHO05D009341 7.2e-33 145.2 220 45.0
Sp3g06090 Schrenkiella parvula HOM05D007399 ORTHO05D009341 7.2e-33 145.2 215 42.8
BcaC05g29751 Brassica carinata HOM05D007399 ORTHO05D009341 6.1e-32 142.1 214 43.9
CANSAT01G2134 Cannabis sativa HOM05D007399 ORTHO05D009341 7.9e-32 141.7 217 44.2
CARHR081750 Cardamine hirsuta HOM05D007399 ORTHO05D009341 1.4e-31 141.0 177 45.8
PSO170G3887 Papaver somniferum HOM05D007399 ORTHO05D009341 1.4e-31 141.0 245 39.6
Atru.chr6.1505 Acer truncatum HOM05D007399 ORTHO05D009341 6.7e-31 138.7 92 68.5
CSS0020487 Camellia sinensis var. sinensis HOM05D007399 ORTHO05D009341 1.9e-30 137.1 105 67.6
PSO357G0666 Papaver somniferum HOM05D007399 ORTHO05D009341 2.5e-30 136.7 245 38.8
AUR62008936 Chenopodium quinoa HOM05D007399 ORTHO05D009341 9.7e-30 134.8 201 46.3
Thhalv10022223m.g Eutrema salsugineum HOM05D007399 ORTHO05D009341 1.3e-29 134.4 166 47.0
Oeu037384.1 Olea europaea HOM05D007399 ORTHO05D009341 1.3e-29 134.4 97 66.0
THA.LOC104802666 Tarenaya hassleriana HOM05D007399 ORTHO05D009341 1.7e-29 134.0 227 42.3
CANSAT01G0413 Cannabis sativa HOM05D007399 ORTHO05D009341 2.8e-29 133.3 212 42.5
DCAR_000523 Daucus carota HOM05D007399 ORTHO05D009341 4.8e-29 132.5 182 47.8
SalBow6G3187 Salvia bowleyana HOM05D007399 ORTHO05D009341 6.3e-29 132.1 212 40.1
SalBow6G3685 Salvia bowleyana HOM05D007399 ORTHO05D009341 6.3e-29 132.1 212 40.1
Actinidia23717 Actinidia chinensis HOM05D007399 ORTHO05D009341 1.8e-28 130.6 233 38.2
CANSAT01G1231 Cannabis sativa HOM05D007399 ORTHO05D009341 2.6e-27 126.7 143 49.7
Sc24g0003500 Simmondsia chinensis HOM05D007399 ORTHO05D009341 2.6e-27 126.7 177 43.5
SHI28622 Sapria himalayana HOM05D000002 ORTHO05D000001 4.5e-27 125.9 100 59.0
EL10Ac7g17870 Beta vulgaris HOM05D007399 ORTHO05D009341 2.9e-26 123.2 92 64.1
CANSAT01G2481 Cannabis sativa HOM05D007399 ORTHO05D009341 2.7e-24 116.7 147 46.9
CDE06G2632 Ceratophyllum demersum HOM05D007399 ORTHO05D009341 4.7e-24 115.9 85 67.1
Hund20426 Selenicereus undatus HOM05D007399 ORTHO05D009341 5.3e-20 102.4 79 63.3
SEGI_10803 Sequoiadendron giganteum HOM05D007399 ORTHO05D009341 3.8e-18 96.3 201 31.8
ATR0609G108 Amborella trichopoda HOM05D007399 ORTHO05D009341 2.1e-16 90.5 107 47.7
HPP92_011779 Vanilla planifolia HOM05D007399 ORTHO05D009341 6.7e-15 85.5 232 30.2
Aqoxy5G00011 Aquilegia oxysepala HOM05D007399 ORTHO05D009341 1.2e-11 74.7 205 35.1
Os01g0918400 Oryza sativa ssp. japonica HOM05D007399 ORTHO05D009341 3.8e-10 69.7 64 46.9
Zm00001eb364650 Zea mays HOM05D007399 ORTHO05D009341 1.0e-07 61.6 64 40.6


User provided reference genes

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