Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G019701 Phaseolus vulgaris HOM05D005458 ORTHO05D005672 2.0e-27 125.2 68 100.0
Lalb_Chr07g0194291 Lupinus albus HOM05D005458 ORTHO05D005672 9.1e-17 89.7 59 83.1
Haze_24813 Corylus avellana HOM05D005458 ORTHO05D005672 1.2e-16 89.4 63 74.6
VMungo0331G1336 Vigna mungo HOM05D005458 ORTHO05D005672 3.5e-16 87.8 59 84.7
TWI75G0430 Tripterygium wilfordii HOM05D005458 ORTHO05D005672 4.5e-16 87.4 61 80.3
Potri.014G056600 Populus trichocarpa HOM05D005458 ORTHO05D005672 7.7e-16 86.7 62 79.0
Sc05g0002070 Simmondsia chinensis HOM05D005458 ORTHO05D005672 3.8e-15 84.3 59 74.6
Ca_17417_v3 Cicer arietinum L. HOM05D005458 ORTHO05D005672 6.5e-15 83.6 62 77.4
Psat3g147360 Pisum sativum HOM05D005458 ORTHO05D005672 6.5e-15 83.6 62 77.4
Prupe.8G201600 Prunus persica HOM05D005458 ORTHO05D005672 8.5e-15 83.2 56 76.8
Thecc.01G224300 Theobroma cacao HOM05D005458 ORTHO05D005672 8.5e-15 83.2 62 77.4
Aa31LG9G4840 Aethionema arabicum HOM05D002547 ORTHO05D002649 1.9e-14 82.0 61 72.1
Glyma.08G351700 Glycine max HOM05D005458 ORTHO05D005672 1.9e-14 82.0 60 78.3
Phvul.008G127837 Phaseolus vulgaris HOM05D005458 ORTHO05D005672 1.9e-14 82.0 61 77.0
Lj1g0002931 Lotus japonicus HOM05D005458 ORTHO05D005672 2.5e-14 81.6 60 73.3
Migut.D02491 Erythranthe guttata HOM05D005458 ORTHO05D005672 3.2e-14 81.3 63 73.0
Potri.017G055501 Populus trichocarpa HOM05D005458 ORTHO05D005672 3.2e-14 81.3 61 75.4
Phvul.010G019201 Phaseolus vulgaris HOM05D005458 ORTHO05D005672 4.2e-14 80.9 83 60.2
FAN15G3619 Fragaria x ananassa HOM05D005458 ORTHO05D005672 5.5e-14 80.5 61 80.3
CsaV3_2G011550 Cucumis sativus L. HOM05D005458 ORTHO05D005672 9.4e-14 79.7 62 75.8
Carub.0007s2961 Capsella rubella HOM05D005458 ORTHO05D005672 1.2e-13 79.3 62 67.7
Thhalv10026728m.g Eutrema salsugineum HOM05D005458 ORTHO05D005672 1.2e-13 79.3 62 67.7
CiPaw.03G148500 Carya illinoinensis HOM05D005458 ORTHO05D005672 2.1e-13 78.6 61 73.8
Peaxi162Scf00047g00517 Petunia axillaris HOM05D005458 ORTHO05D005672 2.7e-13 78.2 62 75.8
Lj3g0027829 Lotus japonicus HOM05D005458 ORTHO05D005672 3.6e-13 77.8 52 82.7
Lalb_Chr01g0022281 Lupinus albus HOM05D005458 ORTHO05D005672 6.1e-13 77.0 59 78.0
GSVIVG01003386001 Vitis vinifera HOM05D005458 ORTHO05D005672 6.1e-13 77.0 61 73.8
Atru.chr4.1700 Acer truncatum HOM05D005458 ORTHO05D005672 1.4e-12 75.9 63 68.3
ClCG09G008920 Citrullus lanatus HOM05D001590 ORTHO05D005672 1.4e-12 75.9 49 79.6
CANSAT11G1273 Cannabis sativa HOM05D005458 ORTHO05D005672 1.8e-12 75.5 62 72.6
Ciclev10006390m.g Citrus clementina HOM05D005458 ORTHO05D005672 1.8e-12 75.5 62 74.2
Lsat_1_v5_gn_8_89780 Lactuca sativa HOM05D005458 ORTHO05D005672 1.8e-12 75.5 57 75.4
Peaxi162Scf00594g00523 Petunia axillaris HOM05D005458 ORTHO05D005672 2.3e-12 75.1 56 76.8
Manes.12G045600 Manihot esculenta HOM05D005458 ORTHO05D005672 3.0e-12 74.7 55 74.5
Gorai.004G226200 Gossypium raimondii HOM05D005458 ORTHO05D005672 4.0e-12 74.3 58 72.4
CAN.G1635.9 Capsicum annuum HOM05D005458 ORTHO05D005672 5.2e-12 73.9 63 71.4
Nn1g07886 Nelumbo nucifera HOM05D005458 ORTHO05D005672 5.2e-12 73.9 57 75.4
Aqoxy2G03857 Aquilegia oxysepala HOM05D005458 ORTHO05D005672 1.2e-11 72.8 57 71.9
CiPaw.01G120800 Carya illinoinensis HOM05D005458 ORTHO05D005672 1.5e-11 72.4 60 71.7
PGSC0003DMG400031295 Solanum tuberosum HOM05D005458 ORTHO05D005672 1.5e-11 72.4 61 73.8
ECA248G3568 Erigeron canadensis HOM05D000609 ORTHO05D000462 2.0e-11 72.0 65 64.6
Hma1.2p1_1407F.1_g281420 Hydrangea macrophylla HOM05D000434 ORTHO05D005672 2.0e-11 72.0 58 72.4
MD05G1174200 Malus domestica HOM05D005458 ORTHO05D005672 2.0e-11 72.0 68 66.2
Mapoly0075s0018 Marchantia polymorpha HOM05D005458 ORTHO05D005672 2.0e-11 72.0 60 68.3
Prupe.1G008500 Prunus persica HOM05D005458 ORTHO05D005672 2.0e-11 72.0 62 74.2
Lsat_1_v5_gn_6_60280 Lactuca sativa HOM05D005458 ORTHO05D005672 2.6e-11 71.6 61 67.2
Manes.15G054000 Manihot esculenta HOM05D005458 ORTHO05D005672 2.6e-11 71.6 62 71.0
Medtr7g056410 Medicago truncatula HOM05D005458 ORTHO05D005672 2.6e-11 71.6 56 75.0
ClCG06G007830 Citrullus lanatus HOM05D005458 ORTHO05D005672 3.4e-11 71.2 55 76.4
Glyma.18G164200 Glycine max HOM05D005458 ORTHO05D005672 3.4e-11 71.2 61 73.8
PSO017G2416 Papaver somniferum HOM05D005458 ORTHO05D005672 4.4e-11 70.9 61 68.9
PSO063G0044 Papaver somniferum HOM05D005458 ORTHO05D005672 4.4e-11 70.9 61 68.9
Cc03_g07880 Coffea canephora HOM05D005458 ORTHO05D005672 5.7e-11 70.5 49 81.6
Duzib211G0320 Durio zibethinus HOM05D005458 ORTHO05D005672 7.5e-11 70.1 48 77.1
Sc19g0007160 Simmondsia chinensis HOM05D005458 ORTHO05D005672 7.5e-11 70.1 61 65.6
Gohir.D07G207100 Gossypium hirsutum HOM05D005458 ORTHO05D005672 9.8e-11 69.7 48 77.1
Gorai.001G233500 Gossypium raimondii HOM05D005458 ORTHO05D005672 9.8e-11 69.7 48 77.1
TPR.G14533 Trifolium pratense HOM05D005458 ORTHO05D005672 9.8e-11 69.7 56 73.2
VMungo1383G3675 Vigna mungo HOM05D005458 ORTHO05D000001 9.8e-11 69.7 60 73.3
Cpa.g.sc8.142 Carica papaya HOM05D005458 ORTHO05D005672 1.7e-10 68.9 48 75.0
Hund16751 Selenicereus undatus HOM05D005458 ORTHO05D005672 1.7e-10 68.9 61 65.6
GSVIVG01021052001 Vitis vinifera HOM05D005458 ORTHO05D005672 4.8e-10 67.4 59 64.4
AT3G24100 Arabidopsis thaliana HOM05D005458 ORTHO05D005672 6.3e-10 67.0 50 76.0
arahy.Tifrunner.gnm1.ann1.XWTR79 Arachis hypogaea HOM05D005458 ORTHO05D005672 6.3e-10 67.0 46 76.1
Duzib133G0368 Durio zibethinus HOM05D005458 ORTHO05D005672 6.3e-10 67.0 48 75.0
ATR1145G024 Amborella trichopoda HOM05D005458 ORTHO05D005672 8.3e-10 66.6 60 70.0
Eucgr.H00051 Eucalyptus grandis HOM05D005458 ORTHO05D005672 1.1e-09 66.2 61 67.2
Pp3c13_10560 Physcomitrium patens HOM05D005458 ORTHO05D005672 1.1e-09 66.2 56 69.6
Rhsim02G0057300 Rhododendron simsii HOM05D005458 ORTHO05D005672 1.1e-09 66.2 59 64.4
Zm00001eb287790 Zea mays HOM05D005458 ORTHO05D005672 1.1e-09 66.2 57 68.4
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 1.4e-09 65.9 52 69.2
Lalb_Chr19g0125681 Lupinus albus HOM05D005458 ORTHO05D005672 2.4e-09 65.1 59 71.2
Pp3c4_17970 Physcomitrium patens HOM05D005458 ORTHO05D005672 2.4e-09 65.1 60 65.0
FvH4_4g16450 Fragaria vesca HOM05D005458 ORTHO05D005672 3.1e-09 64.7 64 62.5
arahy.Tifrunner.gnm1.ann1.AN5TC9 Arachis hypogaea HOM05D005458 ORTHO05D005672 4.1e-09 64.3 47 74.5
Duzib138G0965 Durio zibethinus HOM05D005458 ORTHO05D005672 4.1e-09 64.3 48 72.9
DCAR_018640 Daucus carota HOM05D001184 ORTHO05D003397 7.0e-09 63.5 45 77.8
arahy.Tifrunner.gnm1.ann1.58ZGJB Arachis hypogaea HOM05D005458 ORTHO05D005672 1.2e-08 62.8 46 73.9
Carub.0003s2440 Capsella rubella HOM05D005458 ORTHO05D005672 1.2e-08 62.8 49 73.5
Hund27148 Selenicereus undatus HOM05D005458 ORTHO05D005672 1.2e-08 62.8 63 60.3
Ah.13g078150 Amaranthus hybridus HOM05D002428 ORTHO05D000462 1.6e-08 62.4 61 60.7
CARHR100100 Cardamine hirsuta HOM05D005458 ORTHO05D005672 1.6e-08 62.4 48 75.0
Cpa.g.sc2154.1 Carica papaya HOM05D005458 ORTHO05D005672 1.6e-08 62.4 56 67.9
Gohir.A07G157232 Gossypium hirsutum HOM05D005458 ORTHO05D005672 1.6e-08 62.4 50 70.0
Gohir.A08G195125 Gossypium hirsutum HOM05D005458 ORTHO05D005672 1.6e-08 62.4 48 72.9
Os05g0407100 Oryza sativa ssp. japonica HOM05D005458 ORTHO05D005672 1.6e-08 62.4 56 66.1
CARHR219300 Cardamine hirsuta HOM05D005458 ORTHO05D005672 2.7e-08 61.6 49 71.4
Medtr8g013640 Medicago truncatula HOM05D005458 ORTHO05D005672 2.7e-08 61.6 60 61.7
PGR142G1434 Punica granatum HOM05D005458 ORTHO05D005672 2.7e-08 61.6 48 72.9
AT4G13615 Arabidopsis thaliana HOM05D005458 ORTHO05D005672 3.5e-08 61.2 49 71.4
MELO3C020447.2 Cucumis melo HOM05D005458 ORTHO05D005672 3.5e-08 61.2 47 74.5
Pp3c12_4160 Physcomitrium patens HOM05D005458 ORTHO05D005672 3.5e-08 61.2 56 64.3
Pp3c12_4180 Physcomitrium patens HOM05D005458 ORTHO05D005672 3.5e-08 61.2 60 61.7
Potri.001G315400 Populus trichocarpa HOM05D005458 ORTHO05D005672 3.5e-08 61.2 48 68.8
AL3G39170 Arabidopsis lyrata HOM05D005458 ORTHO05D005672 4.5e-08 60.8 48 72.9
MELO3C021034.2 Cucumis melo HOM05D005458 ORTHO05D005672 5.9e-08 60.5 39 76.9
Glyma.16G094600 Glycine max HOM05D005458 ORTHO05D005672 5.9e-08 60.5 49 73.5
Gohir.D07G163401 Gossypium hirsutum HOM05D005458 ORTHO05D005672 5.9e-08 60.5 49 69.4
Gorai.001G187200 Gossypium raimondii HOM05D005458 ORTHO05D005672 5.9e-08 60.5 49 69.4
MD04G1009100 Malus domestica HOM05D005458 ORTHO05D005672 7.7e-08 60.1 57 63.2
Psat4g203440 Pisum sativum HOM05D005458 ORTHO05D005672 7.7e-08 60.1 59 61.0
AL7G42970 Arabidopsis lyrata HOM05D005458 ORTHO05D005672 1.0e-07 59.7 48 70.8
EL10Ac3g07484 Beta vulgaris HOM05D005458 ORTHO05D005672 1.0e-07 59.7 64 59.4
ECA236G0552 Erigeron canadensis HOM05D001779 ORTHO05D001753 1.0e-07 59.7 55 65.5
Thhalv10026730m.g Eutrema salsugineum HOM05D005458 ORTHO05D005672 1.0e-07 59.7 48 70.8
A04p08570 Brassica napus HOM05D005458 ORTHO05D005672 1.7e-07 58.9 48 70.8
BolC4t25811H Brassica oleracea HOM05D005458 ORTHO05D005672 1.7e-07 58.9 48 70.8
BraA04t16551Z Brassica rapa HOM05D005458 ORTHO05D005672 1.7e-07 58.9 48 70.8
unitig_736.g22466 Utricularia gibba HOM05D005458 ORTHO05D005672 1.7e-07 58.9 49 71.4
Cc01_g16920 Coffea canephora HOM05D005458 ORTHO05D005672 2.3e-07 58.5 51 68.6
Thhalv10002785m.g Eutrema salsugineum HOM05D005458 ORTHO05D005672 2.9e-07 58.2 45 73.3
Migut.N00389 Erythranthe guttata HOM05D005458 ORTHO05D005672 3.8e-07 57.8 61 63.9
Rhsim13G0046400 Rhododendron simsii HOM05D005458 ORTHO05D005672 3.8e-07 57.8 44 68.2
Manes.03G147401 Manihot esculenta HOM05D005458 ORTHO05D005672 6.6e-07 57.0 62 62.9
THA.LOC104804811 Tarenaya hassleriana HOM05D005458 ORTHO05D005672 1.1e-06 56.2 61 62.3
COL.COLO4_12105 Corchorus olitorius HOM05D001094 ORTHO05D001050 1.5e-06 55.8 42 69.0
Migut.K01238 Erythranthe guttata HOM05D005458 ORTHO05D005672 1.5e-06 55.8 36 80.6
arahy.Tifrunner.gnm1.ann1.U1G5UA Arachis hypogaea HOM05D005458 ORTHO05D005672 1.9e-06 55.5 40 72.5
BcaC02g09406 Brassica carinata HOM05D016886 ORTHO05D005672 1.9e-06 55.5 45 71.1
FAN07G0843 Fragaria x ananassa HOM05D005458 ORTHO05D005672 3.3e-06 54.7 59 59.3
Dinv27235 Davidia involucrata HOM05D005458 ORTHO05D005672 5.5e-06 53.9 58 62.1
BcaB04g17662 Brassica carinata HOM05D005458 ORTHO05D005672 9.5e-06 53.1 45 68.9
Rhsim04G0088400 Rhododendron simsii HOM05D005388 ORTHO05D006281 9.5e-06 53.1 48 64.6


User provided reference genes

Program Settings