Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G019201 Phaseolus vulgaris HOM05D005458 ORTHO05D005672 1.3e-42 176.0 90 100.0
Phvul.010G019701 Phaseolus vulgaris HOM05D005458 ORTHO05D005672 1.1e-14 83.2 83 60.2
Phvul.008G127837 Phaseolus vulgaris HOM05D005458 ORTHO05D005672 3.1e-12 75.1 86 57.0
Ca_17417_v3 Cicer arietinum L. HOM05D005458 ORTHO05D005672 5.3e-12 74.3 87 54.0
Potri.014G056600 Populus trichocarpa HOM05D005458 ORTHO05D005672 1.5e-11 72.8 89 53.9
Psat3g147360 Pisum sativum HOM05D005458 ORTHO05D005672 2.0e-11 72.4 87 54.0
Haze_24813 Corylus avellana HOM05D005458 ORTHO05D005672 5.8e-11 70.9 81 53.1
TWI75G0430 Tripterygium wilfordii HOM05D005458 ORTHO05D005672 5.8e-11 70.9 88 52.3
Thecc.01G224300 Theobroma cacao HOM05D005458 ORTHO05D005672 9.9e-11 70.1 88 52.3
Lj1g0002931 Lotus japonicus HOM05D005458 ORTHO05D005672 1.7e-10 69.3 88 51.1
Glyma.08G351700 Glycine max HOM05D005458 ORTHO05D005672 2.9e-10 68.6 86 52.3
Lalb_Chr07g0194291 Lupinus albus HOM05D005458 ORTHO05D005672 1.4e-09 66.2 82 50.0
VMungo0331G1336 Vigna mungo HOM05D005458 ORTHO05D005672 1.9e-09 65.9 84 52.4
Prupe.8G201600 Prunus persica HOM05D005458 ORTHO05D005672 5.4e-09 64.3 84 50.0
CsaV3_2G011550 Cucumis sativus L. HOM05D005458 ORTHO05D005672 7.1e-09 63.9 86 48.8
Potri.017G055501 Populus trichocarpa HOM05D005458 ORTHO05D005672 7.1e-09 63.9 87 48.3
Sc05g0002070 Simmondsia chinensis HOM05D005458 ORTHO05D005672 7.1e-09 63.9 81 48.1
Peaxi162Scf00047g00517 Petunia axillaris HOM05D005458 ORTHO05D005672 1.2e-08 63.2 84 51.2
GSVIVG01003386001 Vitis vinifera HOM05D005458 ORTHO05D005672 1.6e-08 62.8 84 51.2
Manes.15G054000 Manihot esculenta HOM05D005458 ORTHO05D005672 2.7e-08 62.0 88 47.7
Carub.0007s2961 Capsella rubella HOM05D005458 ORTHO05D005672 4.6e-08 61.2 81 48.1
Thhalv10026728m.g Eutrema salsugineum HOM05D005458 ORTHO05D005672 4.6e-08 61.2 81 48.1
Ciclev10006390m.g Citrus clementina HOM05D005458 ORTHO05D005672 7.8e-08 60.5 85 50.6
Aa31LG9G4840 Aethionema arabicum HOM05D002547 ORTHO05D002649 1.0e-07 60.1 79 49.4
Migut.D02491 Erythranthe guttata HOM05D005458 ORTHO05D005672 1.0e-07 60.1 88 46.6
Manes.12G045600 Manihot esculenta HOM05D005458 ORTHO05D005672 1.0e-07 60.1 75 50.7
Gohir.D07G207100 Gossypium hirsutum HOM05D005458 ORTHO05D005672 1.3e-07 59.7 70 54.3
Gorai.001G233500 Gossypium raimondii HOM05D005458 ORTHO05D005672 1.3e-07 59.7 70 54.3
CANSAT11G1273 Cannabis sativa HOM05D005458 ORTHO05D005672 1.7e-07 59.3 85 49.4
CAN.G1635.9 Capsicum annuum HOM05D005458 ORTHO05D005672 1.7e-07 59.3 82 50.0
Sc19g0007160 Simmondsia chinensis HOM05D005458 ORTHO05D005672 1.7e-07 59.3 88 46.6
Medtr7g056410 Medicago truncatula HOM05D005458 ORTHO05D005672 2.3e-07 58.9 81 49.4
CiPaw.03G148500 Carya illinoinensis HOM05D005458 ORTHO05D005672 3.0e-07 58.5 85 45.9
CiPaw.01G120800 Carya illinoinensis HOM05D005458 ORTHO05D005672 3.9e-07 58.2 85 48.2
Glyma.18G164200 Glycine max HOM05D005458 ORTHO05D005672 3.9e-07 58.2 84 48.8
Duzib211G0320 Durio zibethinus HOM05D005458 ORTHO05D005672 5.1e-07 57.8 70 51.4
FAN15G3619 Fragaria x ananassa HOM05D005458 ORTHO05D005672 5.1e-07 57.8 83 50.6
Lalb_Chr01g0022281 Lupinus albus HOM05D005458 ORTHO05D005672 5.1e-07 57.8 86 48.8
Prupe.1G008500 Prunus persica HOM05D005458 ORTHO05D005672 5.1e-07 57.8 88 47.7
TPR.G14533 Trifolium pratense HOM05D005458 ORTHO05D005672 6.6e-07 57.4 78 50.0
Atru.chr4.1700 Acer truncatum HOM05D005458 ORTHO05D005672 1.1e-06 56.6 83 45.8
Aqoxy2G03857 Aquilegia oxysepala HOM05D005458 ORTHO05D005672 1.1e-06 56.6 86 45.3
Gorai.004G226200 Gossypium raimondii HOM05D005458 ORTHO05D005672 1.1e-06 56.6 85 45.9
Lsat_1_v5_gn_6_60280 Lactuca sativa HOM05D005458 ORTHO05D005672 1.5e-06 56.2 83 47.0
Nn1g07886 Nelumbo nucifera HOM05D005458 ORTHO05D005672 1.5e-06 56.2 88 48.9
Peaxi162Scf00594g00523 Petunia axillaris HOM05D005458 ORTHO05D005672 1.5e-06 56.2 78 50.0
Hund16751 Selenicereus undatus HOM05D005458 ORTHO05D005672 1.5e-06 56.2 88 45.5
Duzib133G0368 Durio zibethinus HOM05D005458 ORTHO05D005672 1.9e-06 55.8 70 50.0
Lsat_1_v5_gn_8_89780 Lactuca sativa HOM05D005458 ORTHO05D005672 2.5e-06 55.5 90 45.6
Lj3g0027829 Lotus japonicus HOM05D005458 ORTHO05D005672 2.5e-06 55.5 73 49.3
ClCG09G008920 Citrullus lanatus HOM05D001590 ORTHO05D005672 3.3e-06 55.1 74 45.9
Hma1.2p1_1407F.1_g281420 Hydrangea macrophylla HOM05D000434 ORTHO05D005672 3.3e-06 55.1 85 49.4
Mapoly0075s0018 Marchantia polymorpha HOM05D005458 ORTHO05D005672 3.3e-06 55.1 82 46.3
ECA248G3568 Erigeron canadensis HOM05D000609 ORTHO05D000462 4.3e-06 54.7 83 45.8
arahy.Tifrunner.gnm1.ann1.XWTR79 Arachis hypogaea HOM05D005458 ORTHO05D005672 5.6e-06 54.3 39 69.2
Cpa.g.sc8.142 Carica papaya HOM05D005458 ORTHO05D005672 5.6e-06 54.3 70 50.0
VMungo1383G3675 Vigna mungo HOM05D005458 ORTHO05D000001 5.6e-06 54.3 82 47.6
GSVIVG01021052001 Vitis vinifera HOM05D005458 ORTHO05D005672 5.6e-06 54.3 87 47.1
Cc03_g07880 Coffea canephora HOM05D005458 ORTHO05D005672 7.3e-06 53.9 78 48.7
PSO017G2416 Papaver somniferum HOM05D005458 ORTHO05D005672 7.3e-06 53.9 87 47.1
PSO063G0044 Papaver somniferum HOM05D005458 ORTHO05D005672 7.3e-06 53.9 87 47.1
ClCG06G007830 Citrullus lanatus HOM05D005458 ORTHO05D005672 9.6e-06 53.5 77 48.1


User provided reference genes

Program Settings