Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G018500 Phaseolus vulgaris HOM05D006148 ORTHO05D007955 1.2e-88 330.1 197 100.0
VMungo0331G0425 Vigna mungo HOM05D006148 ORTHO05D007955 8.7e-60 234.2 147 87.1
Glyma.16G092500 Glycine max HOM05D006148 ORTHO05D007955 7.6e-56 221.1 147 79.6
Ca_20510_v3 Cicer arietinum L. HOM05D006148 ORTHO05D007955 2.5e-51 206.1 196 62.8
TPR.G30538 Trifolium pratense HOM05D006148 ORTHO05D007955 5.6e-51 204.9 194 61.9
Medtr3g086600 Medicago truncatula HOM05D006148 ORTHO05D007955 3.7e-50 202.2 144 72.9
Lj3g0001636 Lotus japonicus HOM05D006148 ORTHO05D007955 1.1e-49 200.7 202 68.3
Glyma.09G078400 Glycine max HOM05D006148 ORTHO05D007955 6.9e-49 198.0 147 74.1
Psat5g091640 Pisum sativum HOM05D006148 ORTHO05D007955 6.9e-49 198.0 146 71.2
Lalb_Chr18g0047251 Lupinus albus HOM05D006148 ORTHO05D007955 4.5e-48 195.3 146 71.2
Lalb_Chr15g0078661 Lupinus albus HOM05D006148 ORTHO05D007955 1.4e-46 190.3 146 69.2
CANSAT21G1845 Cannabis sativa HOM05D006148 ORTHO05D007955 2.7e-45 186.0 144 66.7
Oeu040676.1 Olea europaea HOM05D006148 ORTHO05D007955 2.3e-44 183.0 141 69.5
Hma1.2p1_0840F.1_g226570 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 3.0e-44 182.6 137 68.6
Manes.02G044300 Manihot esculenta HOM05D006148 ORTHO05D007955 3.9e-44 182.2 152 65.1
Oeu017209.1 Olea europaea HOM05D006148 ORTHO05D007955 1.1e-43 180.6 139 68.3
MSTRG.9371 Avicennia marina HOM05D006148 ORTHO05D007955 1.5e-43 180.3 137 68.6
Gohir.D12G216200 Gossypium hirsutum HOM05D006148 ORTHO05D007955 1.5e-43 180.3 139 67.6
Gorai.008G231600 Gossypium raimondii HOM05D006148 ORTHO05D007955 1.5e-43 180.3 139 67.6
arahy.Tifrunner.gnm1.ann1.0GR2GF Arachis hypogaea HOM05D006148 ORTHO05D007955 1.9e-43 179.9 193 52.3
arahy.Tifrunner.gnm1.ann1.L2DS42 Arachis hypogaea HOM05D006148 ORTHO05D007955 1.9e-43 179.9 193 52.3
Migut.I00620 Erythranthe guttata HOM05D006148 ORTHO05D007955 1.9e-43 179.9 145 65.5
Dinv21692 Davidia involucrata HOM05D006148 ORTHO05D007955 2.5e-43 179.5 137 67.9
Gohir.A12G213600 Gossypium hirsutum HOM05D006148 ORTHO05D007955 3.3e-43 179.1 139 66.9
CiPaw.12G047200 Carya illinoinensis HOM05D006148 ORTHO05D007955 1.3e-42 177.2 139 66.2
RcHm_v2.0_Chr7g0205301 Rosa chinensis HOM05D006148 ORTHO05D007955 1.3e-42 177.2 139 69.1
CSS0033428 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 2.8e-42 176.0 137 67.9
Cc02_g08620 Coffea canephora HOM05D006148 ORTHO05D007955 1.4e-41 173.7 128 70.3
Duzib068G0643 Durio zibethinus HOM05D006148 ORTHO05D007955 1.4e-41 173.7 139 64.7
Aqoxy7G03487 Aquilegia oxysepala HOM05D006148 ORTHO05D007955 3.1e-41 172.6 142 64.8
Ciclev10022620m.g Citrus clementina HOM05D006148 ORTHO05D007955 5.3e-41 171.8 149 62.4
PGR031G0321 Punica granatum HOM05D006148 ORTHO05D007955 6.9e-41 171.4 151 62.9
Eucgr.D02128 Eucalyptus grandis HOM05D006148 ORTHO05D007955 1.5e-40 170.2 134 66.4
Aa31LG2G13090 Aethionema arabicum HOM05D006148 ORTHO05D007955 2.6e-40 169.5 153 60.1
Nitab4.5_0000506g0080 Nicotiana tabacum HOM05D006148 ORTHO05D007955 2.6e-40 169.5 126 70.6
Nitab4.5_0003456g0030 Nicotiana tabacum HOM05D006148 ORTHO05D007955 2.6e-40 169.5 126 70.6
Atru.chr9.1220 Acer truncatum HOM05D006148 ORTHO05D007955 3.4e-40 169.1 137 67.2
FvH4_5g20230 Fragaria vesca HOM05D006148 ORTHO05D007955 3.4e-40 169.1 139 65.5
SGA_v2.0_scaffold377G50308 Striga asiatica HOM05D006148 ORTHO05D007955 3.4e-40 169.1 140 62.1
SGA_v2.0_scaffold40G15681 Striga asiatica HOM05D006148 ORTHO05D007955 7.6e-40 167.9 140 62.1
FAN13G2154 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.0e-39 167.5 139 64.7
FAN13G3051 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.0e-39 167.5 139 64.7
TAR375G0576 Trochodendron aralioides HOM05D006148 ORTHO05D007955 1.0e-39 167.5 139 63.3
DCAR_005581 Daucus carota HOM05D006148 ORTHO05D007955 1.7e-39 166.8 141 61.7
MD06G1048200 Malus domestica HOM05D006148 ORTHO05D007955 1.7e-39 166.8 128 67.2
vmacro14126 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 1.7e-39 166.8 128 68.0
MD04G1051900 Malus domestica HOM05D006148 ORTHO05D007955 2.9e-39 166.0 139 63.3
Prupe.5G058400 Prunus persica HOM05D006148 ORTHO05D007955 3.8e-39 165.6 144 61.1
Solyc08g077970.2 Solanum lycopersicum HOM05D006148 ORTHO05D007955 3.8e-39 165.6 134 62.7
PGSC0003DMG400026577 Solanum tuberosum HOM05D006148 ORTHO05D007955 3.8e-39 165.6 144 61.8
THA.LOC104814463 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 3.8e-39 165.6 128 68.0
ClCG09G012770 Citrullus lanatus HOM05D006148 ORTHO05D007955 5.0e-39 165.2 137 64.2
Solyc06g060920.3 Solanum lycopersicum HOM05D006148 ORTHO05D007955 6.5e-39 164.9 144 61.8
Sopen06g021070 Solanum pennellii HOM05D006148 ORTHO05D007955 6.5e-39 164.9 144 61.8
Rhsim07G0118900 Rhododendron simsii HOM05D006148 ORTHO05D007955 8.4e-39 164.5 128 66.4
Potri.012G038600 Populus trichocarpa HOM05D006148 ORTHO05D007955 1.1e-38 164.1 131 64.1
Sopen08g026480 Solanum pennellii HOM05D006148 ORTHO05D007955 1.1e-38 164.1 134 62.7
PGSC0003DMG400026249 Solanum tuberosum HOM05D006148 ORTHO05D007955 1.1e-38 164.1 137 60.6
Actinidia10861 Actinidia chinensis HOM05D006148 ORTHO05D007955 1.4e-38 163.7 139 64.0
Thecc.03G242700 Theobroma cacao HOM05D006148 ORTHO05D007955 1.4e-38 163.7 123 69.1
Peaxi162Scf00190g00088 Petunia axillaris HOM05D006148 ORTHO05D007955 2.5e-38 162.9 126 67.5
SalBow1G4160 Salvia bowleyana HOM05D006148 ORTHO05D007955 2.5e-38 162.9 123 66.7
TWI15G0129 Tripterygium wilfordii HOM05D006148 ORTHO05D007955 2.5e-38 162.9 126 65.1
Carub.0007s2441 Capsella rubella HOM05D006148 ORTHO05D007955 4.2e-38 162.2 157 57.3
Nitab4.5_0007628g0010 Nicotiana tabacum HOM05D006148 ORTHO05D007955 4.2e-38 162.2 142 59.2
unitig_46.g17987 Utricularia gibba HOM05D006148 ORTHO05D007955 5.5e-38 161.8 131 64.9
unitig_747.g21320 Utricularia gibba HOM05D006148 ORTHO05D007955 1.2e-37 160.6 131 63.4
MBI15_g47175_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 1.6e-37 160.2 132 65.2
C01p25460 Brassica napus HOM05D006148 ORTHO05D007955 2.1e-37 159.8 153 58.2
Sed0014825 Sechium edule HOM05D006148 ORTHO05D007955 2.1e-37 159.8 139 61.2
THA.LOC104812735 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 2.1e-37 159.8 145 60.7
BcaNung00135 Brassica carinata HOM05D006148 ORTHO05D007955 7.9e-37 157.9 153 58.2
A01p20300 Brassica napus HOM05D006148 ORTHO05D007955 1.0e-36 157.5 153 57.5
THA.LOC104807925 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 1.0e-36 157.5 128 65.6
BcaC09g50434 Brassica carinata HOM05D006148 ORTHO05D007955 1.3e-36 157.1 153 58.2
BraA01t01958Z Brassica rapa HOM05D006148 ORTHO05D007955 1.3e-36 157.1 153 58.2
COL.COLO4_07508 Corchorus olitorius HOM05D006148 ORTHO05D007955 1.3e-36 157.1 139 59.0
CsaV3_3G049830 Cucumis sativus L. HOM05D006148 ORTHO05D007955 1.3e-36 157.1 126 65.9
BolC1t02497H Brassica oleracea HOM05D006148 ORTHO05D007955 2.3e-36 156.4 153 58.2
CAN.G761.17 Capsicum annuum HOM05D006148 ORTHO05D007955 2.3e-36 156.4 137 56.9
MELO3C003333.2 Cucumis melo HOM05D006148 ORTHO05D007955 2.3e-36 156.4 125 64.8
CSS0030063 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 3.0e-36 156.0 142 57.0
Lj2A228G47 Lonicera japonica HOM05D006148 ORTHO05D007955 5.1e-36 155.2 112 70.5
Sabra12G0027000 Salix brachista HOM05D006148 ORTHO05D007955 8.7e-36 154.5 142 57.7
FAN04G0567 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.1e-35 154.1 161 55.3
FAN08G3523 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.1e-35 154.1 170 54.1
Rhsim07G0118700 Rhododendron simsii HOM05D006148 ORTHO05D007955 1.9e-35 153.3 147 57.8
Sp7g17180 Schrenkiella parvula HOM05D006148 ORTHO05D007955 1.9e-35 153.3 152 56.6
Sc22g0005540 Simmondsia chinensis HOM05D006148 ORTHO05D007955 1.9e-35 153.3 137 61.3
Lsat_1_v5_gn_3_16181 Lactuca sativa HOM05D006148 ORTHO05D007955 2.5e-35 152.9 151 55.0
CDE04G1348 Ceratophyllum demersum HOM05D006148 ORTHO05D007955 9.7e-35 151.0 144 54.2
Sed0021147 Sechium edule HOM05D006148 ORTHO05D007955 9.7e-35 151.0 141 55.3
DCAR_008334 Daucus carota HOM05D006148 ORTHO05D007955 1.3e-34 150.6 130 60.0
Lj3A721T48 Lonicera japonica HOM05D006148 ORTHO05D007955 2.8e-34 149.4 131 61.8
ECA248G1075 Erigeron canadensis HOM05D006148 ORTHO05D007955 3.7e-34 149.1 145 52.4
Haze_05448 Corylus avellana HOM05D006148 ORTHO05D007955 1.1e-33 147.5 201 46.8
PSO541G2943 Papaver somniferum HOM05D006148 ORTHO05D007955 1.8e-33 146.7 120 60.8
CARHR223570 Cardamine hirsuta HOM05D006148 ORTHO05D007955 2.4e-33 146.4 151 55.0
AT4G17010 Arabidopsis thaliana HOM05D006148 ORTHO05D007955 5.3e-33 145.2 153 55.6
HanXRQChr17g0550021 Helianthus annuus HOM05D006148 ORTHO05D007955 1.2e-32 144.1 131 55.7
EL10Ac5g12797 Beta vulgaris HOM05D006148 ORTHO05D007955 4.5e-32 142.1 125 60.8
Thhalv10026445m.g Eutrema salsugineum HOM05D006148 ORTHO05D007955 4.5e-32 142.1 152 53.9
HPP92_005702 Vanilla planifolia HOM05D006148 ORTHO05D007955 7.7e-32 141.4 127 58.3
AL7G37710 Arabidopsis lyrata HOM05D006148 ORTHO05D007955 2.9e-31 139.4 153 54.2
PSO675G9254 Papaver somniferum HOM05D006148 ORTHO05D007955 2.9e-31 139.4 120 60.0
Hund11457 Selenicereus undatus HOM05D006148 ORTHO05D007955 8.5e-31 137.9 125 58.4
Os04g0431800 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 1.9e-30 136.7 148 50.0
AUR62017180 Chenopodium quinoa HOM05D006148 ORTHO05D007955 5.5e-30 135.2 136 53.7
Os02g0494600 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 4.6e-29 132.1 142 49.3
Hma1.2p1_1008F.1_g247180 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 1.4e-28 130.6 113 61.1
ATR0767G234 Amborella trichopoda HOM05D006148 ORTHO05D007955 6.7e-28 128.3 138 50.7
Zm00001eb422600 Zea mays HOM05D006148 ORTHO05D007955 2.2e-26 123.2 107 57.0
Nn1g00796 Nelumbo nucifera HOM05D006148 ORTHO05D007955 2.8e-26 122.9 127 54.3
QL12p009037 Quercus lobata HOM05D006148 ORTHO05D007955 4.1e-25 119.0 291 33.7
vmacro00048 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 2.5e-22 109.8 76 72.4
MBI06_g25325_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 7.9e-21 104.8 96 59.4
Lj2A721G5 Lonicera japonica HOM05D006148 ORTHO05D007955 1.4e-17 94.0 72 66.7
Cpa.g.sc1152.2 Carica papaya HOM05D006148 ORTHO05D007955 5.0e-15 85.5 73 61.6
Ah.07g196390 Amaranthus hybridus HOM05D006148 ORTHO05D007955 4.2e-14 82.4 102 50.0
SEGI_12345 Sequoiadendron giganteum HOM05D006148 ORTHO05D007955 4.2e-14 82.4 153 35.3
AUR62010708 Chenopodium quinoa HOM05D006148 ORTHO05D007955 2.3e-12 76.6 125 40.0
AUR62027260 Chenopodium quinoa HOM05D006148 ORTHO05D007955 3.9e-12 75.9 136 36.8
Oeu017208.1 Olea europaea HOM05D002196 ORTHO05D002565 2.6e-11 73.2 63 58.7
Nitab4.5_0000500g0150 Nicotiana tabacum HOM05D006148 ORTHO05D007955 2.8e-10 69.7 110 39.1
MBI15_g37973_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 1.9e-06 57.0 45 60.0


User provided reference genes

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