Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G015600 Phaseolus vulgaris HOM05D005320 ORTHO05D007922 1.0e-110 403.3 190 100.0
VMungo0331G1509 Vigna mungo HOM05D005320 ORTHO05D007922 1.8e-107 392.5 188 97.9
Glyma.03G068800 Glycine max HOM05D005320 ORTHO05D007922 5.5e-104 380.9 190 95.3
Glyma.01G100200 Glycine max HOM05D005320 ORTHO05D007922 2.1e-103 379.0 190 94.7
Lalb_Chr01g0013501 Lupinus albus HOM05D005320 ORTHO05D007922 3.6e-103 378.3 188 94.1
arahy.Tifrunner.gnm1.ann1.AE34S8 Arachis hypogaea HOM05D005320 ORTHO05D007922 6.8e-102 374.0 189 92.1
arahy.Tifrunner.gnm1.ann1.SHW8SI Arachis hypogaea HOM05D005320 ORTHO05D007922 2.0e-101 372.5 189 91.5
CSS0000536 Camellia sinensis var. sinensis HOM05D005320 ORTHO05D007922 3.7e-100 368.2 189 89.9
PGR031G0341 Punica granatum HOM05D005320 ORTHO05D007922 6.3e-100 367.5 188 89.9
Ca_20076_v3 Cicer arietinum L. HOM05D005320 ORTHO05D007922 1.1e-99 366.7 190 91.6
Gohir.A04G083900 Gossypium hirsutum HOM05D005320 ORTHO05D007922 1.1e-99 366.7 188 89.4
GSVIVG01034127001 Vitis vinifera HOM05D005320 ORTHO05D007922 2.4e-99 365.5 188 88.8
Duzib128G0467 Durio zibethinus HOM05D005320 ORTHO05D007922 5.4e-99 364.4 189 88.9
Gohir.D04G122700 Gossypium hirsutum HOM05D005320 ORTHO05D007922 5.4e-99 364.4 188 88.8
Thecc.05G035400 Theobroma cacao HOM05D005320 ORTHO05D007922 1.2e-98 363.2 189 89.4
MD12G1146200 Malus domestica HOM05D005320 ORTHO05D007922 2.0e-98 362.5 188 88.8
Prupe.6G259400 Prunus persica HOM05D005320 ORTHO05D007922 3.5e-98 361.7 188 88.8
QL07p030104 Quercus lobata HOM05D005320 ORTHO05D007922 4.5e-98 361.3 188 87.8
QL07p030908 Quercus lobata HOM05D005320 ORTHO05D007922 4.5e-98 361.3 188 87.8
Actinidia05326 Actinidia chinensis HOM05D005320 ORTHO05D007922 5.9e-98 360.9 188 88.3
Gorai.012G105600 Gossypium raimondii HOM05D005320 ORTHO05D007922 5.9e-98 360.9 192 87.5
MD04G1133400 Malus domestica HOM05D005320 ORTHO05D007922 5.9e-98 360.9 188 88.3
Lj3g0008944 Lotus japonicus HOM05D005320 ORTHO05D007922 1.0e-97 360.1 189 89.4
Ciclev10012735m.g Citrus clementina HOM05D005320 ORTHO05D007922 1.7e-97 359.4 188 87.8
CiPaw.09G195900 Carya illinoinensis HOM05D005320 ORTHO05D007922 2.3e-97 359.0 188 88.3
TPR.G17890 Trifolium pratense HOM05D005320 ORTHO05D007922 2.3e-97 359.0 190 89.5
CANSAT35G1431 Cannabis sativa HOM05D005320 ORTHO05D007922 3.8e-97 358.2 189 87.3
Hma1.2p1_1082F.1_g255150 Hydrangea macrophylla HOM05D005320 ORTHO05D007922 6.6e-97 357.5 188 87.2
Manes.09G092200 Manihot esculenta HOM05D005320 ORTHO05D007922 6.6e-97 357.5 188 87.8
Atru.chr8.2014 Acer truncatum HOM05D005320 ORTHO05D007922 8.6e-97 357.1 189 87.8
PSO339G2759 Papaver somniferum HOM05D005320 ORTHO05D007922 8.6e-97 357.1 188 86.7
TWI74G0393 Tripterygium wilfordii HOM05D005320 ORTHO05D007922 8.6e-97 357.1 188 87.8
Medtr4g020460 Medicago truncatula HOM05D005320 ORTHO05D007922 1.1e-96 356.7 190 88.9
Nn2g11189 Nelumbo nucifera HOM05D005320 ORTHO05D007922 1.1e-96 356.7 188 86.2
Rhsim05G0195000 Rhododendron simsii HOM05D005320 ORTHO05D007922 1.5e-96 356.3 188 87.2
PSO063G2683 Papaver somniferum HOM05D005320 ORTHO05D007922 4.2e-96 354.8 188 86.2
SGA_v2.0_scaffold126G33759 Striga asiatica HOM05D005320 ORTHO05D007922 4.2e-96 354.8 188 85.6
Dinv35573 Davidia involucrata HOM05D005320 ORTHO05D007922 7.2e-96 354.0 188 85.6
Sc07g0007050 Simmondsia chinensis HOM05D005320 ORTHO05D007922 7.2e-96 354.0 188 85.1
COL.COLO4_14757 Corchorus olitorius HOM05D005320 ORTHO05D007922 1.2e-95 353.2 188 86.7
MBI05_g35634_MAGBIO Magnolia biondii HOM05D005320 ORTHO05D007922 1.2e-95 353.2 190 86.3
Duzib093G0721 Durio zibethinus HOM05D005320 ORTHO05D007922 2.1e-95 352.4 190 86.8
Nitab4.5_0000770g0150 Nicotiana tabacum HOM05D005320 ORTHO05D007922 2.1e-95 352.4 189 86.8
Nitab4.5_0005100g0070 Nicotiana tabacum HOM05D005320 ORTHO05D007922 2.1e-95 352.4 189 86.8
Atru.chr8.2015 Acer truncatum HOM05D005320 ORTHO05D007922 3.6e-95 351.7 189 86.2
Migut.J00304 Erythranthe guttata HOM05D005320 ORTHO05D007922 3.6e-95 351.7 188 84.6
Dinv37147 Davidia involucrata HOM05D005320 ORTHO05D007922 1.0e-94 350.1 211 78.7
CSS0049441 Camellia sinensis var. sinensis HOM05D005320 ORTHO05D007922 1.4e-94 349.7 192 84.9
Psat7g239840 Pisum sativum HOM05D005320 ORTHO05D007922 1.4e-94 349.7 190 86.8
MSTRG.19072 Avicennia marina HOM05D005320 ORTHO05D007922 4.0e-94 348.2 188 85.1
vmacro20179 Vaccinium macrocarpon HOM05D005320 ORTHO05D007922 4.0e-94 348.2 204 80.4
unitig_21.g21010 Utricularia gibba HOM05D005320 ORTHO05D007922 5.2e-94 347.8 188 85.1
Cc06_g02320 Coffea canephora HOM05D005320 ORTHO05D007922 6.8e-94 347.4 188 84.0
CAN.G324.16 Capsicum annuum HOM05D005320 ORTHO05D007922 1.2e-93 346.7 189 85.7
Solyc10g084850.2 Solanum lycopersicum HOM05D005320 ORTHO05D007922 9.8e-93 343.6 189 85.2
Sopen10g034290 Solanum pennellii HOM05D005320 ORTHO05D007922 9.8e-93 343.6 189 85.2
PGSC0003DMG400011070 Solanum tuberosum HOM05D005320 ORTHO05D007922 9.8e-93 343.6 189 85.2
Lsat_1_v5_gn_5_153940 Lactuca sativa HOM05D005320 ORTHO05D007922 1.3e-92 343.2 188 84.6
Aqoxy1G00876 Aquilegia oxysepala HOM05D005320 ORTHO05D007922 1.7e-92 342.8 191 83.2
Sp4g20060 Schrenkiella parvula HOM05D005320 ORTHO05D007922 1.7e-92 342.8 189 84.7
CDE07G0950 Ceratophyllum demersum HOM05D005320 ORTHO05D007922 3.7e-92 341.7 188 83.0
ClCG04G008030 Citrullus lanatus HOM05D005320 ORTHO05D007922 3.7e-92 341.7 188 84.0
CARHR131860 Cardamine hirsuta HOM05D005320 ORTHO05D007922 4.9e-92 341.3 189 84.1
Sed0022090 Sechium edule HOM05D005320 ORTHO05D007922 4.9e-92 341.3 188 85.1
ATR0559G120 Amborella trichopoda HOM05D005320 ORTHO05D007922 1.1e-91 340.1 189 82.5
AL4G34610 Arabidopsis lyrata HOM05D005320 ORTHO05D007922 1.1e-91 340.1 189 83.6
AT2G37680 Arabidopsis thaliana HOM05D005320 ORTHO05D007922 1.1e-91 340.1 189 83.6
Thhalv10017226m.g Eutrema salsugineum HOM05D005320 ORTHO05D007922 1.1e-91 340.1 189 84.1
BcaB06g29019 Brassica carinata HOM05D005320 ORTHO05D007922 1.8e-91 339.3 189 83.6
THA.LOC104823414 Tarenaya hassleriana HOM05D005320 ORTHO05D007922 4.1e-91 338.2 189 82.5
BolC4t28116H Brassica oleracea HOM05D005320 ORTHO05D007922 5.4e-91 337.8 189 83.1
Lj3A964T54 Lonicera japonica HOM05D005320 ORTHO05D007922 5.4e-91 337.8 221 73.8
CsaV3_4G025180 Cucumis sativus L. HOM05D005320 ORTHO05D007922 7.0e-91 337.4 188 83.0
HanXRQChr13g0406901 Helianthus annuus HOM05D005320 ORTHO05D007922 7.0e-91 337.4 188 83.0
Zm00001eb124510 Zea mays HOM05D005320 ORTHO05D007922 1.2e-90 336.7 194 79.9
DCAR_012114 Daucus carota HOM05D005320 ORTHO05D007922 1.6e-90 336.3 192 82.3
BcaC02g07499 Brassica carinata HOM05D005320 ORTHO05D007922 2.0e-90 335.9 189 83.1
C04p66130 Brassica napus HOM05D005320 ORTHO05D007922 2.0e-90 335.9 189 83.1
BraA04t18363Z Brassica rapa HOM05D005320 ORTHO05D007922 2.7e-90 335.5 189 83.1
RcHm_v2.0_Chr3g0466041 Rosa chinensis HOM05D005320 ORTHO05D007922 4.6e-90 334.7 189 83.6
ECA248G2752 Erigeron canadensis HOM05D005320 ORTHO05D007922 5.9e-90 334.3 189 83.1
A04p28870 Brassica napus HOM05D005320 ORTHO05D007922 1.0e-89 333.6 189 82.5
CDE06G1896 Ceratophyllum demersum HOM05D005320 ORTHO05D007922 1.0e-89 333.6 188 82.4
FAN02G2927 Fragaria x ananassa HOM05D005320 ORTHO05D007922 1.0e-89 333.6 189 83.1
RcHm_v2.0_Chr3g0466001 Rosa chinensis HOM05D005320 ORTHO05D007922 1.3e-89 333.2 189 83.1
FvH4_6g13220 Fragaria vesca HOM05D005320 ORTHO05D007922 2.3e-89 332.4 189 82.5
Carub.0004s1963 Capsella rubella HOM05D005320 ORTHO05D007922 2.9e-89 332.0 189 81.5
TAR623G0888 Trochodendron aralioides HOM05D005320 ORTHO05D007922 6.6e-89 330.9 173 86.1
Aa31sc70G70 Aethionema arabicum HOM05D005320 ORTHO05D007922 8.6e-89 330.5 189 82.0
Potri.016G100600 Populus trichocarpa HOM05D005320 ORTHO05D007922 1.1e-88 330.1 198 79.3
Eucgr.K01475 Eucalyptus grandis HOM05D005320 ORTHO05D007922 2.5e-88 328.9 214 74.8
Os03g0679000 Oryza sativa ssp. japonica HOM05D005320 ORTHO05D007922 3.3e-88 328.6 192 77.1
AUR62043523 Chenopodium quinoa HOM05D005320 ORTHO05D007922 1.6e-87 326.2 157 93.6
Peaxi162Scf00094g00911 Petunia axillaris HOM05D005320 ORTHO05D007922 6.1e-87 324.3 165 89.1
FAN14G1919 Fragaria x ananassa HOM05D005320 ORTHO05D007922 8.0e-87 323.9 173 86.1
Os01g0144200 Oryza sativa ssp. japonica HOM05D005320 ORTHO05D007922 1.0e-86 323.6 192 76.6
AUR62042382 Chenopodium quinoa HOM05D005320 ORTHO05D007922 2.3e-86 322.4 176 85.8
FAN05G0090 Fragaria x ananassa HOM05D005320 ORTHO05D007922 4.0e-86 321.6 173 85.5
Oeu007799.1 Olea europaea HOM05D005320 ORTHO05D007922 9.2e-83 310.5 155 89.7
HPP92_026786 Vanilla planifolia HOM05D005320 ORTHO05D007922 2.7e-82 308.9 170 81.8
Mapoly0038s0068 Marchantia polymorpha HOM05D005320 ORTHO05D007922 1.6e-74 283.1 162 74.7
Pp3c6_13830 Physcomitrium patens HOM05D005320 ORTHO05D007922 2.7e-74 282.3 163 74.2
SMO356G0269 Selaginella moellendorffii HOM05D005320 ORTHO05D007922 5.1e-73 278.1 162 72.8
AagrBONN_evm.TU.Sc2ySwM_117.2668 Anthoceros agrestis HOM05D005320 ORTHO05D007922 1.9e-72 276.2 169 72.2
CBR_g30417 Chara braunii HOM05D005320 ORTHO05D007922 1.2e-66 256.9 172 66.3
Zm00001eb335820 Zea mays HOM05D005320 ORTHO05D007922 1.5e-64 250.0 118 92.4
Cpa.g.c45575 Carica papaya HOM05D005320 ORTHO05D007922 1.2e-63 246.9 118 93.2
Hma1.2p1_0936F.1_g239015 Hydrangea macrophylla HOM05D005320 ORTHO05D007922 3.6e-63 245.4 144 78.5
Hma1.2p1_1082F.1_g255160 Hydrangea macrophylla HOM05D005320 ORTHO05D007922 3.6e-63 245.4 144 78.5
RcHm_v2.0_Chr3g0465971 Rosa chinensis HOM05D005320 ORTHO05D007922 1.1e-59 233.8 118 89.0
EL10As1g23111 Beta vulgaris HOM05D005320 ORTHO05D007922 2.7e-58 229.2 106 94.3
RcHm_v2.0_Chr3g0465901 Rosa chinensis HOM05D005320 ORTHO05D007922 1.3e-57 226.9 145 74.5
Hma1.2p1_1082F.1_g255140 Hydrangea macrophylla HOM05D005320 ORTHO05D007922 6.6e-57 224.6 125 83.2
Sabra16G0101600 Salix brachista HOM05D005320 ORTHO05D007922 1.5e-53 213.4 106 87.7
Haze_20829 Corylus avellana HOM05D005320 ORTHO05D007922 9.9e-53 210.7 106 86.8
HPP92_000741 Vanilla planifolia HOM05D005320 ORTHO05D007922 1.7e-49 199.9 103 82.5
Hma1.2p1_0766F.1_g215380 Hydrangea macrophylla HOM05D005320 ORTHO05D007922 6.2e-47 191.4 106 84.0
RcHm_v2.0_Chr3g0465921 Rosa chinensis HOM05D005320 ORTHO05D007922 1.0e-41 174.1 89 91.0
EL10As1g23112 Beta vulgaris HOM05D005320 ORTHO05D007922 1.1e-32 144.1 86 81.4
Haze_20831 Corylus avellana HOM05D000026 ORTHO05D000094 1.5e-32 143.7 82 82.9
HPP92_000739 Vanilla planifolia HOM05D005320 ORTHO05D007922 1.6e-26 123.6 66 83.3
Cre17.g744497 Chlamydomonas reinhardtii HOM05D005320 ORTHO05D007922 7.4e-24 114.8 200 34.5
Mapoly0050s0129 Marchantia polymorpha HOM05D005320 ORTHO05D007922 1.6e-18 97.1 175 33.7
MELO3C003145.2 Cucumis melo HOM05D000231 ORTHO05D000132 6.3e-15 85.1 39 97.4
RcHm_v2.0_Chr7g0189661 Rosa chinensis HOM05D005320 ORTHO05D007922 3.1e-14 82.8 42 83.3
RcHm_v2.0_Chr4g0436891 Rosa chinensis HOM05D005320 ORTHO05D007922 3.4e-13 79.3 64 62.5
Pp3c27_5960 Physcomitrium patens HOM05D005320 ORTHO05D007922 7.4e-08 61.6 39 64.1


User provided reference genes

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