Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G012000 Phaseolus vulgaris HOM05D005945 ORTHO05D006749 0.0e+00 1303.9 723 100.0
VMungo0331G0095 Vigna mungo HOM05D005945 ORTHO05D006749 4.3e-282 974.5 730 80.1
Glyma.03G071500 Glycine max HOM05D005945 ORTHO05D006749 2.3e-243 845.9 821 66.5
Glyma.01G104600 Glycine max HOM05D005945 ORTHO05D006749 9.7e-242 840.5 888 60.7
Lj3g0003314 Lotus japonicus HOM05D005945 ORTHO05D006749 2.2e-177 626.7 750 51.1
arahy.Tifrunner.gnm1.ann1.Q0ZVI3 Arachis hypogaea HOM05D005945 ORTHO05D006749 8.7e-166 588.2 751 48.1
arahy.Tifrunner.gnm1.ann1.01TKSZ Arachis hypogaea HOM05D005945 ORTHO05D006749 7.4e-165 585.1 785 46.8
Lj2g0002553 Lotus japonicus HOM05D005945 ORTHO05D006749 8.4e-161 571.6 737 47.5
Ca_03064_v3 Cicer arietinum L. HOM05D005945 ORTHO05D006749 1.0e-153 548.1 837 43.8
Psat7g242000 Pisum sativum HOM05D005945 ORTHO05D006749 3.5e-151 539.7 876 42.6
TPR.G32532 Trifolium pratense HOM05D005945 ORTHO05D006749 3.1e-139 500.0 993 38.1
Lalb_Chr03g0042671 Lupinus albus HOM05D005945 ORTHO05D006749 1.5e-138 497.7 761 41.9
Medtr4g019490 Medicago truncatula HOM05D005945 ORTHO05D006749 3.4e-130 469.9 1073 35.2
Prupe.1G381200 Prunus persica HOM05D005945 ORTHO05D006749 5.2e-78 296.6 784 32.5
Dinv39407 Davidia involucrata HOM05D005945 ORTHO05D006749 4.1e-75 287.0 835 31.1
Haze_17984 Corylus avellana HOM05D005945 ORTHO05D006749 4.4e-69 266.9 794 31.0
Cfa018140 Carpinus fangiana HOM05D005945 ORTHO05D006749 3.8e-68 263.8 849 29.9
RcHm_v2.0_Chr6g0300761 Rosa chinensis HOM05D005945 ORTHO05D006749 6.6e-65 253.1 800 29.1
FvH4_2g39990 Fragaria vesca HOM05D005945 ORTHO05D006749 1.9e-64 251.5 782 29.3
CSS0038834 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 1.5e-61 241.9 805 29.1
CSS0001698 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 2.0e-61 241.5 805 29.3
QL02p007988 Quercus lobata HOM05D005945 ORTHO05D006749 2.6e-61 241.1 941 26.9
FAN27G1966 Fragaria x ananassa HOM05D005945 ORTHO05D006749 5.8e-61 240.0 813 28.8
FAN20G0334 Fragaria x ananassa HOM05D005945 ORTHO05D006749 1.3e-60 238.8 798 28.2
FAN15G0837 Fragaria x ananassa HOM05D005945 ORTHO05D006749 4.9e-60 236.9 778 28.5
Thecc.08G024700 Theobroma cacao HOM05D005945 ORTHO05D006749 3.9e-57 227.3 870 28.6
Gohir.D06G008100 Gossypium hirsutum HOM05D005945 ORTHO05D006749 7.3e-56 223.0 829 28.6
Actinidia15315 Actinidia chinensis HOM05D005945 ORTHO05D006749 1.6e-55 221.9 838 27.8
ClCG08G015230 Citrullus lanatus HOM05D005945 ORTHO05D006749 2.1e-55 221.5 785 28.0
Gorai.010G010800 Gossypium raimondii HOM05D005945 ORTHO05D006749 2.1e-55 221.5 824 28.5
Manes.18G028200 Manihot esculenta HOM05D005945 ORTHO05D006749 2.8e-55 221.1 801 26.3
Duzib093G2051 Durio zibethinus HOM05D005945 ORTHO05D006749 5.3e-54 216.9 871 28.1
Cc10_g03040 Coffea canephora HOM05D005945 ORTHO05D006749 2.0e-53 214.9 805 27.5
MELO3C010931.2 Cucumis melo HOM05D005945 ORTHO05D006749 1.3e-52 212.2 806 28.5
MD15G1030400 Malus domestica HOM05D005945 ORTHO05D006749 1.3e-52 212.2 739 28.3
TWI12G1232 Tripterygium wilfordii HOM05D005945 ORTHO05D006749 1.3e-52 212.2 737 27.1
Lalb_Chr19g0125061 Lupinus albus HOM05D005945 ORTHO05D006749 2.2e-52 211.5 505 32.5
Gohir.A06G010700 Gossypium hirsutum HOM05D005945 ORTHO05D006749 3.8e-52 210.7 821 27.6
CANSAT25G3494 Cannabis sativa HOM05D005945 ORTHO05D006749 4.9e-52 210.3 866 26.1
PGSC0003DMG400005162 Solanum tuberosum HOM05D005945 ORTHO05D006749 8.4e-52 209.5 777 27.7
CsaV3_2G028570 Cucumis sativus L. HOM05D005945 ORTHO05D006749 1.1e-51 209.1 804 28.5
Oeu056183.1 Olea europaea HOM05D005945 ORTHO05D006749 1.4e-51 208.8 835 27.2
MSTRG.25161 Avicennia marina HOM05D005945 ORTHO05D006749 2.4e-51 208.0 794 28.6
MD08G1033800 Malus domestica HOM05D005945 ORTHO05D006749 2.4e-51 208.0 439 33.9
Oeu036192.1 Olea europaea HOM05D005945 ORTHO05D006749 2.4e-51 208.0 833 26.9
Potri.014G181200 Populus trichocarpa HOM05D005945 ORTHO05D006749 2.4e-51 208.0 250 46.4
Lalb_Chr19g0125071 Lupinus albus HOM05D005945 ORTHO05D006749 5.4e-51 206.8 208 54.8
Nitab4.5_0000110g0520 Nicotiana tabacum HOM05D005945 ORTHO05D006749 3.5e-50 204.1 790 27.8
Sc15g0006890 Simmondsia chinensis HOM05D005945 ORTHO05D006749 3.5e-50 204.1 808 28.5
Manes.05G161400 Manihot esculenta HOM05D005945 ORTHO05D006749 2.3e-49 201.4 828 26.3
GSVIVG01009690001 Vitis vinifera HOM05D005945 ORTHO05D006749 8.7e-49 199.5 257 45.5
Peaxi162Scf00690g00118 Petunia axillaris HOM05D005945 ORTHO05D006749 9.6e-48 196.1 761 26.4
Nitab4.5_0003783g0040 Nicotiana tabacum HOM05D005945 ORTHO05D006749 8.1e-47 193.0 784 27.3
Cpa.g.sc64.76 Carica papaya HOM05D005945 ORTHO05D006749 2.4e-46 191.4 416 33.7
Sed0009733 Sechium edule HOM05D005945 ORTHO05D006749 2.4e-46 191.4 811 26.5
COL.COLO4_26338 Corchorus olitorius HOM05D005945 ORTHO05D006749 5.8e-45 186.8 903 25.5
Rhsim06G0034700 Rhododendron simsii HOM05D005945 ORTHO05D006749 9.9e-45 186.0 819 28.2
Eucgr.F01555 Eucalyptus grandis HOM05D005945 ORTHO05D006749 2.2e-44 184.9 795 27.0
PGR031G1506 Punica granatum HOM05D005945 ORTHO05D006749 3.8e-44 184.1 764 27.5
TAR376G0838 Trochodendron aralioides HOM05D005945 ORTHO05D006749 4.9e-44 183.7 780 26.5
Migut.C00710 Erythranthe guttata HOM05D005945 ORTHO05D006749 8.4e-44 183.0 804 25.4
CiPaw.15G076000 Carya illinoinensis HOM05D005945 ORTHO05D006749 2.7e-42 177.9 395 34.2
Sabra14G0141200 Salix brachista HOM05D005945 ORTHO05D006749 1.0e-41 176.0 288 38.9
Solyc04g080200.4 Solanum lycopersicum HOM05D005945 ORTHO05D006749 1.0e-41 176.0 376 34.6
Sopen04g033790 Solanum pennellii HOM05D005945 ORTHO05D006749 1.8e-41 175.3 374 35.3
THA.LOC104803244 Tarenaya hassleriana HOM05D005945 ORTHO05D006749 2.3e-41 174.9 800 25.9
Lsat_1_v5_gn_1_17620 Lactuca sativa HOM05D005945 ORTHO05D006749 1.5e-40 172.2 264 43.2
Carub.0005s2360 Capsella rubella HOM05D005945 ORTHO05D006749 1.9e-40 171.8 772 25.9
TAR628G0886 Trochodendron aralioides HOM05D005945 ORTHO05D006749 2.5e-40 171.4 270 42.2
Dinv36067 Davidia involucrata HOM05D005945 ORTHO05D006749 3.3e-40 171.0 229 45.4
AL5G38260 Arabidopsis lyrata HOM05D005945 ORTHO05D006749 5.6e-40 170.2 772 25.5
Hund26580 Selenicereus undatus HOM05D005945 ORTHO05D006749 5.6e-40 170.2 818 26.2
Nn5g29549 Nelumbo nucifera HOM05D005945 ORTHO05D006749 2.8e-39 167.9 249 40.6
AT3G56870 Arabidopsis thaliana HOM05D005945 ORTHO05D006749 1.1e-38 166.0 760 25.0
HanXRQChr04g0105581 Helianthus annuus HOM05D005945 ORTHO05D006749 2.6e-37 161.4 385 31.4
ECA247G0868 Erigeron canadensis HOM05D005945 ORTHO05D006749 4.5e-37 160.6 897 25.4
DCAR_008766 Daucus carota HOM05D005945 ORTHO05D006749 1.3e-36 159.1 836 25.4
HanXRQChr04g0105591 Helianthus annuus HOM05D005945 ORTHO05D006749 2.2e-36 158.3 760 25.3
PSO675G9049 Papaver somniferum HOM05D005945 ORTHO05D006749 4.9e-36 157.1 254 39.8
PSO541G4169 Papaver somniferum HOM05D005945 ORTHO05D006749 1.4e-35 155.6 255 39.2
Sed0010063 Sechium edule HOM05D005945 ORTHO05D006749 1.4e-35 155.6 821 24.5
Atru.chr13.502 Acer truncatum HOM05D005945 ORTHO05D006749 7.1e-35 153.3 214 42.1
SGA_v2.0_scaffold326G48709 Striga asiatica HOM05D005945 ORTHO05D006749 2.3e-33 148.3 767 26.2
BolC8t50829H Brassica oleracea HOM05D005945 ORTHO05D006749 5.1e-33 147.1 249 36.1
Lj4A42T73 Lonicera japonica HOM05D005945 ORTHO05D006749 3.3e-32 144.4 212 41.0
TAR628G0416 Trochodendron aralioides HOM05D005945 ORTHO05D006749 9.7e-32 142.9 183 47.5
BcaC07g40112 Brassica carinata HOM05D005945 ORTHO05D006749 1.8e-30 138.7 824 24.3
Sp5g05720 Schrenkiella parvula HOM05D005945 ORTHO05D006749 4.1e-30 137.5 242 36.8
BcaC07g39998 Brassica carinata HOM05D005945 ORTHO05D006749 6.9e-30 136.7 857 23.9
C08p32110 Brassica napus HOM05D005945 ORTHO05D006749 6.9e-30 136.7 857 23.9
Gohir.D02G094500 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.2e-29 136.0 225 41.3
Aa31LG10G11720 Aethionema arabicum HOM05D005945 ORTHO05D006749 2.6e-29 134.8 748 24.7
Thhalv10005811m.g Eutrema salsugineum HOM05D005945 ORTHO05D006749 7.7e-29 133.3 780 24.2
CARHR167020 Cardamine hirsuta HOM05D005945 ORTHO05D006749 1.7e-28 132.1 247 36.8
A09p49740 Brassica napus HOM05D005945 ORTHO05D006749 2.9e-28 131.3 852 23.5
BraA09t40427Z Brassica rapa HOM05D005945 ORTHO05D006749 2.9e-28 131.3 852 23.5
Gorai.005G107400 Gossypium raimondii HOM05D005945 ORTHO05D006749 8.5e-28 129.8 227 41.0
MBI16_g17464_MAGBIO Magnolia biondii HOM05D005945 ORTHO05D006749 3.2e-27 127.9 256 36.3
AUR62043686 Chenopodium quinoa HOM05D005945 ORTHO05D006749 9.4e-27 126.3 307 32.2
Zm00001eb021170 Zea mays HOM05D005945 ORTHO05D006749 1.2e-26 125.9 276 35.5
Aqoxy4G01586 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 2.1e-26 125.2 238 37.0
Aqoxy6G01057 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 1.0e-25 122.9 242 36.0
EL10Ac1g01817 Beta vulgaris HOM05D005945 ORTHO05D006749 2.3e-25 121.7 302 32.5
HPP92_021270 Vanilla planifolia HOM05D005945 ORTHO05D006749 2.3e-25 121.7 242 37.2
Ah.11g043130 Amaranthus hybridus HOM05D005945 ORTHO05D006749 3.0e-25 121.3 279 36.9
Zm00001eb404680 Zea mays HOM05D005945 ORTHO05D006749 6.7e-25 120.2 238 37.4
AUR62038825 Chenopodium quinoa HOM05D005945 ORTHO05D006749 8.8e-25 119.8 802 24.4
Os03g0594700 Oryza sativa ssp. japonica HOM05D005945 ORTHO05D006749 2.5e-24 118.2 337 32.3
ATR0618G067 Amborella trichopoda HOM05D005945 ORTHO05D006749 9.1e-22 109.8 151 44.4
Actinidia22556 Actinidia chinensis HOM05D005945 ORTHO05D006749 1.7e-20 105.5 701 22.7
SEGI_34412 Sequoiadendron giganteum HOM05D057448 ORTHO05D006749 1.4e-19 102.4 133 45.9
vmacro21631 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 1.9e-19 102.1 176 36.9
Aqoxy4G01559 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 7.2e-19 100.1 212 34.4
Ah.05g167400 Amaranthus hybridus HOM05D005945 ORTHO05D006749 1.6e-18 99.0 211 33.6
Atru.chr13.504 Acer truncatum HOM05D005945 ORTHO05D006749 8.2e-15 86.7 216 34.7
Sc18g0006320 Simmondsia chinensis HOM05D005945 ORTHO05D006749 8.2e-15 86.7 209 35.4
vmacro21630 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 1.8e-14 85.5 208 34.1
TAR381G0602 Trochodendron aralioides HOM05D005945 ORTHO05D006749 5.0e-12 77.4 132 40.2
AagrBONN_evm.TU.Sc2ySwM_344.3266 Anthoceros agrestis HOM05D005945 ORTHO05D006749 1.4e-09 69.3 130 34.6
HPP92_021280 Vanilla planifolia HOM05D050438 ORTHO05D006749 3.9e-09 67.8 242 31.0
CDE04G3738 Ceratophyllum demersum HOM05D060868 ORTHO05D006749 6.3e-07 60.5 75 40.0
Mapoly0005s0138 Marchantia polymorpha HOM05D036654 ORTHO05D006749 2.4e-06 58.5 159 28.3
Potri.002G262601 Populus trichocarpa HOM05D005945 ORTHO05D006749 3.1e-06 58.2 110 39.1


User provided reference genes

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