Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G011100 Phaseolus vulgaris HOM05D007483 ORTHO05D009133 3.2e-83 311.6 149 100.0
VMungo0331G1516 Vigna mungo HOM05D007483 ORTHO05D009133 3.8e-68 261.5 149 83.2
Glyma.03G066000 Glycine max HOM05D007483 ORTHO05D009133 9.8e-64 246.9 149 79.2
Lalb_Chr07g0193781 Lupinus albus HOM05D007483 ORTHO05D009133 3.6e-50 201.8 147 68.0
Lj3g0014039 Lotus japonicus HOM05D007483 ORTHO05D009133 3.4e-48 195.3 160 66.2
arahy.Tifrunner.gnm1.ann1.A9IP9X Arachis hypogaea HOM05D007483 ORTHO05D009133 4.4e-48 194.9 144 66.7
RcHm_v2.0_Chr3g0466381 Rosa chinensis HOM05D007483 ORTHO05D009133 1.4e-46 189.9 147 63.9
arahy.Tifrunner.gnm1.ann1.29J2UD Arachis hypogaea HOM05D007483 ORTHO05D009133 3.2e-46 188.7 136 69.1
Medtr4g021820 Medicago truncatula HOM05D007483 ORTHO05D009133 7.8e-45 184.1 168 57.7
FAN09G2152 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.0e-44 183.7 147 61.9
CiPaw.09G194400 Carya illinoinensis HOM05D007483 ORTHO05D009133 1.7e-44 183.0 119 73.1
FAN14G1457 Fragaria x ananassa HOM05D007483 ORTHO05D009133 3.9e-44 181.8 147 61.2
FAN02G3616 Fragaria x ananassa HOM05D007483 ORTHO05D009133 5.0e-44 181.4 147 61.2
Ca_05061_v3 Cicer arietinum L. HOM05D007483 ORTHO05D009133 6.6e-44 181.0 137 65.0
FAN05G4215 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.9e-43 179.5 147 60.5
QL07p048670 Quercus lobata HOM05D007483 ORTHO05D009133 3.3e-43 178.7 144 60.4
Cfa016672 Carpinus fangiana HOM05D007483 ORTHO05D009133 4.3e-43 178.3 133 65.4
THA.LOC104816252 Tarenaya hassleriana HOM05D007483 ORTHO05D009133 2.1e-42 176.0 148 58.8
Actinidia13151 Actinidia chinensis HOM05D007483 ORTHO05D009133 6.2e-42 174.5 144 62.5
Cfa017361 Carpinus fangiana HOM05D007483 ORTHO05D009133 8.1e-42 174.1 137 64.2
Sed0013393 Sechium edule HOM05D007483 ORTHO05D009133 1.4e-41 173.3 150 60.0
GSVIVG01034153001 Vitis vinifera HOM05D007483 ORTHO05D009133 2.3e-41 172.6 140 63.6
Duzib093G2195 Durio zibethinus HOM05D007483 ORTHO05D009133 3.1e-41 172.2 143 62.2
Sp3g07690 Schrenkiella parvula HOM05D007483 ORTHO05D009133 5.2e-41 171.4 117 66.7
Aqoxy1G00916 Aquilegia oxysepala HOM05D007483 ORTHO05D009133 6.8e-41 171.0 134 62.7
ClCG04G008120 Citrullus lanatus HOM05D007483 ORTHO05D009133 8.9e-41 170.6 149 57.7
Gohir.A12G221500 Gossypium hirsutum HOM05D007483 ORTHO05D009133 8.9e-41 170.6 142 59.9
Gohir.D12G223900 Gossypium hirsutum HOM05D007483 ORTHO05D009133 1.5e-40 169.9 142 60.6
Thecc.05G037700 Theobroma cacao HOM05D007483 ORTHO05D009133 2.6e-40 169.1 143 59.4
AT3G09310 Arabidopsis thaliana HOM05D007483 ORTHO05D009133 4.4e-40 168.3 112 68.8
CARHR083670 Cardamine hirsuta HOM05D007483 ORTHO05D009133 4.4e-40 168.3 110 71.8
MD12G1143600 Malus domestica HOM05D007483 ORTHO05D009133 4.4e-40 168.3 151 55.6
Aa31LG3G1800 Aethionema arabicum HOM05D007483 ORTHO05D009133 5.8e-40 167.9 141 60.3
AL3G20460 Arabidopsis lyrata HOM05D007483 ORTHO05D009133 9.9e-40 167.2 112 67.0
BcaC05g29522 Brassica carinata HOM05D007483 ORTHO05D009133 9.9e-40 167.2 115 68.7
BcaC05g29659 Brassica carinata HOM05D007483 ORTHO05D009133 1.3e-39 166.8 139 59.0
CAN.G324.11 Capsicum annuum HOM05D007483 ORTHO05D009133 1.3e-39 166.8 94 77.7
BraA05t22748Z Brassica rapa HOM05D007483 ORTHO05D009133 1.7e-39 166.4 130 62.3
Carub.0003s0842 Capsella rubella HOM05D007483 ORTHO05D009133 1.7e-39 166.4 136 63.2
HPP92_019244 Vanilla planifolia HOM05D007483 ORTHO05D009133 1.7e-39 166.4 90 78.9
MSTRG.19078 Avicennia marina HOM05D007483 ORTHO05D009133 2.2e-39 166.0 155 58.7
A05p39660 Brassica napus HOM05D007483 ORTHO05D009133 2.2e-39 166.0 115 67.0
Prupe.6G257100 Prunus persica HOM05D007483 ORTHO05D009133 2.9e-39 165.6 147 57.1
C05p58700 Brassica napus HOM05D007483 ORTHO05D009133 4.9e-39 164.9 132 61.4
BolC5t34519H Brassica oleracea HOM05D007483 ORTHO05D009133 4.9e-39 164.9 132 61.4
Nn2g13380 Nelumbo nucifera HOM05D007483 ORTHO05D009133 4.9e-39 164.9 119 63.9
Thhalv10021669m.g Eutrema salsugineum HOM05D007483 ORTHO05D009133 6.4e-39 164.5 143 57.3
Dinv35587 Davidia involucrata HOM05D007483 ORTHO05D009133 1.9e-38 162.9 135 59.3
Sopen10g034250 Solanum pennellii HOM05D007483 ORTHO05D009133 3.2e-38 162.2 149 55.7
TWI74G0092 Tripterygium wilfordii HOM05D007483 ORTHO05D009133 4.1e-38 161.8 139 58.3
Eucgr.A01276 Eucalyptus grandis HOM05D007483 ORTHO05D009133 5.4e-38 161.4 143 61.5
Os11g0706100 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 5.4e-38 161.4 86 77.9
Migut.J00322 Erythranthe guttata HOM05D007483 ORTHO05D009133 9.2e-38 160.6 135 57.0
Zm00001eb164460 Zea mays HOM05D007483 ORTHO05D009133 2.1e-37 159.5 82 81.7
Manes.08G088800 Manihot esculenta HOM05D007483 ORTHO05D009133 3.5e-37 158.7 139 57.6
AUR62025813 Chenopodium quinoa HOM05D007483 ORTHO05D009133 7.8e-37 157.5 100 69.0
Nitab4.5_0000216g0380 Nicotiana tabacum HOM05D007483 ORTHO05D009133 1.7e-36 156.4 84 81.0
EL10Ac6g14169 Beta vulgaris HOM05D007483 ORTHO05D009133 2.3e-36 156.0 90 74.4
CANSAT11G2488 Cannabis sativa HOM05D007483 ORTHO05D009133 2.3e-36 156.0 109 66.1
Ah.06g191870 Amaranthus hybridus HOM05D007483 ORTHO05D009133 3.0e-36 155.6 90 77.8
ECA247G0729 Erigeron canadensis HOM05D001424 ORTHO05D009133 5.1e-36 154.8 100 67.0
Sabra16G0100900 Salix brachista HOM05D007483 ORTHO05D009133 6.6e-36 154.5 106 66.0
Lsat_1_v5_gn_9_30381 Lactuca sativa HOM05D007483 ORTHO05D009133 8.6e-36 154.1 81 81.5
PSO063G2390 Papaver somniferum HOM05D007483 ORTHO05D009133 1.1e-35 153.7 143 56.6
HanXRQChr16g0497811 Helianthus annuus HOM05D007483 ORTHO05D009133 2.5e-35 152.5 99 68.7
Potri.016G099700 Populus trichocarpa HOM05D007483 ORTHO05D009133 3.3e-35 152.1 75 88.0
Cpa.g.sc169.23 Carica papaya HOM05D007483 ORTHO05D009133 4.3e-35 151.8 126 61.1
TAR636G3143 Trochodendron aralioides HOM05D007483 ORTHO05D009133 1.2e-34 150.2 114 63.2
Hund10634 Selenicereus undatus HOM05D007483 ORTHO05D009133 2.8e-34 149.1 158 49.4
PSO339G1657 Papaver somniferum HOM05D007483 ORTHO05D009133 3.6e-34 148.7 143 53.1
SGA_v2.0_scaffold126G33776 Striga asiatica HOM05D007483 ORTHO05D009133 3.6e-34 148.7 109 63.3
TPR.G7337 Trifolium pratense HOM05D007483 ORTHO05D009133 3.6e-34 148.7 149 53.7
SEGI_13406 Sequoiadendron giganteum HOM05D007483 ORTHO05D009133 4.7e-34 148.3 85 72.9
unitig_744.g24653 Utricularia gibba HOM05D000968 ORTHO05D003096 4.7e-34 148.3 86 72.1
ATR0559G251 Amborella trichopoda HOM05D007483 ORTHO05D009133 1.5e-32 143.3 111 64.0
Solyc10g084810.3 Solanum lycopersicum HOM05D007483 ORTHO05D009133 1.5e-32 143.3 72 83.3
Cc06_g02530 Coffea canephora HOM05D007483 ORTHO05D009133 2.0e-32 142.9 80 77.5
CBR_g19672 Chara braunii HOM05D007483 ORTHO05D009133 3.4e-32 142.1 83 72.3
DCAR_028750 Daucus carota HOM05D007483 ORTHO05D009133 3.4e-32 142.1 72 80.6
Mapoly0019s0017 Marchantia polymorpha HOM05D007483 ORTHO05D009133 3.4e-32 142.1 87 67.8
FvH4_6g13510 Fragaria vesca HOM05D007483 ORTHO05D009133 2.9e-31 139.0 147 50.3
AagrBONN_evm.TU.Sc2ySwM_228.2371 Anthoceros agrestis HOM05D007483 ORTHO05D009133 4.9e-31 138.3 89 68.5
Oeu007795.1 Olea europaea HOM05D007483 ORTHO05D009133 6.4e-31 137.9 71 80.3
Pp3c15_21390 Physcomitrium patens HOM05D007483 ORTHO05D009133 8.4e-31 137.5 99 61.6
Lj2A93G81 Lonicera japonica HOM05D007483 ORTHO05D009133 3.2e-30 135.6 128 60.9
Ciclev10012381m.g Citrus clementina HOM05D007483 ORTHO05D009133 1.2e-29 133.7 152 52.0
Os02g0260400 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 1.2e-29 133.7 64 84.4
CsaV3_4G025070 Cucumis sativus L. HOM05D007483 ORTHO05D009133 3.5e-29 132.1 129 53.5
PGSC0003DMG400011065 Solanum tuberosum HOM05D007483 ORTHO05D009133 6.0e-29 131.3 131 55.7
Sabra13G0104100 Salix brachista HOM05D007483 ORTHO05D009133 5.1e-28 128.3 69 82.6
Nitab4.5_0000202g0060 Nicotiana tabacum HOM05D007483 ORTHO05D009133 1.5e-27 126.7 67 85.1
Rhsim04G0158000 Rhododendron simsii HOM05D007483 ORTHO05D009133 1.5e-27 126.7 68 83.8
MBI05_g28376_MAGBIO Magnolia biondii HOM05D007483 ORTHO05D009133 2.5e-27 125.9 121 56.2
MELO3C033192.2 Cucumis melo HOM05D007483 ORTHO05D009133 2.1e-26 122.9 73 74.0
Cre17.g720183 Chlamydomonas reinhardtii HOM05D007483 ORTHO05D009133 5.2e-25 118.2 72 63.9
Peaxi162Scf00094g01112 Petunia axillaris HOM05D007483 ORTHO05D009133 1.3e-23 113.6 74 68.9
Psat2g094360 Pisum sativum HOM05D007483 ORTHO05D009133 4.9e-23 111.7 92 60.9
SMO165G0096 Selaginella moellendorffii HOM05D007483 ORTHO05D009133 4.6e-21 105.1 65 69.2
PRCOL_00002574 Prasinoderma coloniale HOM05D007483 ORTHO05D009133 9.6e-19 97.4 80 56.2
MCO07G608 Micromonas commoda HOM05D007483 ORTHO05D009133 1.6e-18 96.7 64 56.2
Psat7g235560 Pisum sativum HOM05D007483 ORTHO05D009133 6.9e-09 64.7 71 47.9
CBR_g19673 Chara braunii HOM05D007483 ORTHO05D009133 4.9e-07 58.5 37 67.6
Sc20g0003470 Simmondsia chinensis HOM05D007483 ORTHO05D009133 3.2e-06 55.8 55 47.3


User provided reference genes

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