Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G006800 Phaseolus vulgaris HOM05D003987 ORTHO05D004532 2.5e-188 662.1 346 100.0
Phvul.010G006900 Phaseolus vulgaris HOM05D003987 ORTHO05D004532 8.9e-114 414.5 364 65.7
VMungo0331G1594 Vigna mungo HOM05D003987 ORTHO05D004532 7.0e-50 202.2 352 41.8
Glyma.U031101 Glycine max HOM05D003987 ORTHO05D004532 5.0e-48 196.1 373 42.9
Glyma.01G108900 Glycine max HOM05D003987 ORTHO05D004532 9.4e-47 191.8 373 42.6
Glyma.01G108800 Glycine max HOM05D003987 ORTHO05D004532 4.0e-45 186.4 373 42.1
Lj3g0003026 Lotus japonicus HOM05D003987 ORTHO05D004532 5.2e-45 186.0 383 38.9
Glyma.01G153900 Glycine max HOM05D003987 ORTHO05D004532 2.2e-40 170.6 345 40.6
Glyma.03G074167 Glycine max HOM05D003987 ORTHO05D004532 1.5e-31 141.4 363 35.8
Glyma.18G193700 Glycine max HOM05D003987 ORTHO05D004532 1.5e-31 141.4 368 33.7
Glyma.07G142800 Glycine max HOM05D003987 ORTHO05D004532 1.6e-30 137.9 367 31.9
Lj1g0003107 Lotus japonicus HOM05D003987 ORTHO05D004532 5.9e-25 119.4 371 31.5
VMungo0331G1569 Vigna mungo HOM05D003730 ORTHO05D004458 2.3e-24 117.5 264 40.5
arahy.Tifrunner.gnm1.ann1.S0ZXK0 Arachis hypogaea HOM05D003987 ORTHO05D004532 3.9e-24 116.7 386 33.2
Phvul.008G111900 Phaseolus vulgaris HOM05D003987 ORTHO05D004532 3.9e-24 116.7 369 31.4
arahy.Tifrunner.gnm1.ann1.B3S732 Arachis hypogaea HOM05D003987 ORTHO05D004532 5.0e-24 116.3 385 32.5
Lalb_Chr01g0022851 Lupinus albus HOM05D003987 ORTHO05D004532 5.6e-23 112.8 371 31.3
VMungo1309G3141 Vigna mungo HOM05D014262 ORTHO05D018084 3.6e-22 110.2 340 32.9
Psat7g242560 Pisum sativum HOM05D003987 ORTHO05D004532 8.9e-21 105.5 376 31.6
arahy.Tifrunner.gnm1.ann1.C5KK4K Arachis hypogaea HOM05D003987 ORTHO05D004532 3.7e-19 100.1 372 30.9
VMungo1383G2510 Vigna mungo HOM05D003987 ORTHO05D004532 5.4e-18 96.3 369 30.6
Medtr4g019040 Medicago truncatula HOM05D003987 ORTHO05D004532 1.2e-17 95.1 374 29.4
arahy.Tifrunner.gnm1.ann1.84Z36X Arachis hypogaea HOM05D003987 ORTHO05D004532 1.6e-17 94.7 372 29.8
Phvul.005G150800 Phaseolus vulgaris HOM05D014262 ORTHO05D018084 4.6e-17 93.2 340 29.4
Lalb_Chr19g0124881 Lupinus albus HOM05D003987 ORTHO05D004532 2.3e-16 90.9 373 28.4
Cpa.g.sc56.87 Carica papaya HOM05D003987 ORTHO05D004532 6.6e-16 89.4 387 29.7
Ca_20115_v3 Cicer arietinum L. HOM05D003987 ORTHO05D004532 2.8e-14 84.0 390 28.2
Haze_20924 Corylus avellana HOM05D003987 ORTHO05D004532 4.7e-14 83.2 382 29.8
ClCG10G021770 Citrullus lanatus HOM05D003987 ORTHO05D004532 6.2e-14 82.8 389 28.8
QL07p027561 Quercus lobata HOM05D003987 ORTHO05D004532 8.1e-14 82.4 393 28.8
VMungo1309G2694 Vigna mungo HOM05D014262 ORTHO05D018084 1.4e-13 81.6 330 30.0
Lsat_1_v5_gn_9_33201 Lactuca sativa HOM05D003987 ORTHO05D004532 2.3e-13 80.9 331 29.9
arahy.Tifrunner.gnm1.ann1.L5BN96 Arachis hypogaea HOM05D003987 ORTHO05D004532 5.2e-13 79.7 371 28.3
Phvul.008G081900 Phaseolus vulgaris HOM05D014262 ORTHO05D018084 6.8e-13 79.3 347 29.1
C04p09710 Brassica napus HOM05D003987 ORTHO05D004532 1.2e-12 78.6 303 30.0
Phvul.008G082101 Phaseolus vulgaris HOM05D014262 ORTHO05D018084 1.2e-12 78.6 346 29.2
BcaC02g11934 Brassica carinata HOM05D003987 ORTHO05D004532 1.5e-12 78.2 287 28.6
BraA05t19770Z Brassica rapa HOM05D003987 ORTHO05D004532 1.5e-12 78.2 291 31.6
Oeu044376.1 Olea europaea HOM05D003987 ORTHO05D004532 1.5e-12 78.2 312 28.8
Phvul.006G111000 Phaseolus vulgaris HOM05D003987 ORTHO05D004532 2.0e-12 77.8 186 34.9
A05p08030 Brassica napus HOM05D003987 ORTHO05D004532 3.4e-12 77.0 293 31.4
BolC4t28137H Brassica oleracea HOM05D003987 ORTHO05D004532 3.4e-12 77.0 306 26.5
THA.LOC104805691 Tarenaya hassleriana HOM05D003987 ORTHO05D004532 3.4e-12 77.0 182 31.3
Cfa017278 Carpinus fangiana HOM05D003987 ORTHO05D004532 7.5e-12 75.9 379 28.8
MELO3C009204.2 Cucumis melo HOM05D003987 ORTHO05D004532 1.3e-11 75.1 370 28.1
TPR.G13647 Trifolium pratense HOM05D003987 ORTHO05D004532 1.3e-11 75.1 178 35.4
DCAR_028789 Daucus carota HOM05D003987 ORTHO05D004532 2.2e-11 74.3 260 29.6
Lj2A83T77 Lonicera japonica HOM05D003987 ORTHO05D004532 2.2e-11 74.3 391 28.6
PGR031G1271 Punica granatum HOM05D003987 ORTHO05D004532 2.9e-11 73.9 316 28.8
BcaB02g09232 Brassica carinata HOM05D003987 ORTHO05D004532 3.7e-11 73.6 297 27.6
Medtr7g066170 Medicago truncatula HOM05D003987 ORTHO05D004532 3.7e-11 73.6 171 34.5
Sp5g08320 Schrenkiella parvula HOM05D003987 ORTHO05D004532 3.7e-11 73.6 90 44.4
CANSAT78G1629 Cannabis sativa HOM05D003987 ORTHO05D004532 4.9e-11 73.2 368 28.3
EL10Ac8g18936 Beta vulgaris HOM05D003987 ORTHO05D004532 8.3e-11 72.4 317 28.4
Phvul.010G006100 Phaseolus vulgaris HOM05D014262 ORTHO05D004532 1.1e-10 72.0 316 28.5
vmacro08611 Vaccinium macrocarpon HOM05D003987 ORTHO05D004532 1.1e-10 72.0 385 26.8
BolC4t22577H Brassica oleracea HOM05D003987 ORTHO05D004532 3.2e-10 70.5 291 28.2
CsaV3_3G034330 Cucumis sativus L. HOM05D003987 ORTHO05D004532 3.2e-10 70.5 386 28.5
Manes.09G100200 Manihot esculenta HOM05D003987 ORTHO05D004532 3.2e-10 70.5 389 26.7
Potri.006G094600 Populus trichocarpa HOM05D003987 ORTHO05D004532 3.2e-10 70.5 383 27.4
MSTRG.19040 Avicennia marina HOM05D003987 ORTHO05D004532 7.1e-10 69.3 134 38.1
Actinidia05340 Actinidia chinensis HOM05D003987 ORTHO05D004532 9.2e-10 68.9 262 29.8
DCAR_012161 Daucus carota HOM05D003987 ORTHO05D004532 9.2e-10 68.9 369 28.5
Sed0025444 Sechium edule HOM05D003987 ORTHO05D004532 1.2e-09 68.6 376 28.2
Migut.L01985 Erythranthe guttata HOM05D003987 ORTHO05D004532 2.1e-09 67.8 190 32.1
Dinv35526 Davidia involucrata HOM05D003987 ORTHO05D004532 2.7e-09 67.4 350 27.1
CSS0029662 Camellia sinensis var. sinensis HOM05D003987 ORTHO05D004532 3.5e-09 67.0 307 27.4
Gorai.002G259700 Gossypium raimondii HOM05D003987 ORTHO05D004532 4.6e-09 66.6 376 25.8
Gohir.A01G224300 Gossypium hirsutum HOM05D003987 ORTHO05D004532 6.0e-09 66.2 377 26.5
SalBow3G0011 Salvia bowleyana HOM05D003987 ORTHO05D004532 6.0e-09 66.2 379 26.4
Atru.chr8.2120 Acer truncatum HOM05D003987 ORTHO05D004532 7.8e-09 65.9 372 27.7
Duzib093G0208 Durio zibethinus HOM05D003987 ORTHO05D004532 7.8e-09 65.9 387 27.6
Prupe.6G268000 Prunus persica HOM05D003987 ORTHO05D004532 7.8e-09 65.9 379 27.7
Sabra06G0072400 Salix brachista HOM05D003987 ORTHO05D004532 7.8e-09 65.9 388 26.8
Aqoxy1G00765 Aquilegia oxysepala HOM05D003987 ORTHO05D004532 1.0e-08 65.5 288 28.1
COL.COLO4_14650 Corchorus olitorius HOM05D003987 ORTHO05D004532 1.0e-08 65.5 383 27.7
Thecc.05G024900 Theobroma cacao HOM05D003987 ORTHO05D004532 1.7e-08 64.7 391 28.9
Thhalv10010371m.g Eutrema salsugineum HOM05D003987 ORTHO05D004532 2.3e-08 64.3 300 27.0
Nitab4.5_0000119g0280 Nicotiana tabacum HOM05D003987 ORTHO05D004532 2.3e-08 64.3 362 28.5
Gohir.A04G086900 Gossypium hirsutum HOM05D003987 ORTHO05D004532 3.9e-08 63.5 391 26.9
Gorai.012G110200 Gossypium raimondii HOM05D003987 ORTHO05D004532 3.9e-08 63.5 389 27.0
PGSC0003DMG400019132 Solanum tuberosum HOM05D003987 ORTHO05D004532 3.9e-08 63.5 222 31.5
AUR62028348 Chenopodium quinoa HOM05D003987 ORTHO05D004532 5.1e-08 63.2 356 26.7
Potri.016G109100 Populus trichocarpa HOM05D003987 ORTHO05D004532 5.1e-08 63.2 396 28.0
Ciclev10011513m.g Citrus clementina HOM05D003987 ORTHO05D004532 6.6e-08 62.8 372 26.1
Duzib128G2001 Durio zibethinus HOM05D003987 ORTHO05D004532 6.6e-08 62.8 387 28.7
ECA248G1591 Erigeron canadensis HOM05D003987 ORTHO05D004532 6.6e-08 62.8 150 35.3
MD04G1143500 Malus domestica HOM05D003987 ORTHO05D004532 8.6e-08 62.4 371 27.8
GSVIVG01034033001 Vitis vinifera HOM05D003987 ORTHO05D004532 8.6e-08 62.4 370 27.6
A07p21960 Brassica napus HOM05D003987 ORTHO05D004532 1.1e-07 62.0 276 27.9
Solyc10g086750.1 Solanum lycopersicum HOM05D003987 ORTHO05D004532 1.1e-07 62.0 117 39.3
BraA04t18380Z Brassica rapa HOM05D003987 ORTHO05D004532 1.5e-07 61.6 277 25.6
Peaxi162Scf01302g00045 Petunia axillaris HOM05D003987 ORTHO05D004532 1.9e-07 61.2 118 37.3
RcHm_v2.0_Chr3g0464181 Rosa chinensis HOM05D003987 ORTHO05D004532 1.9e-07 61.2 366 26.5
A04p29100 Brassica napus HOM05D003987 ORTHO05D004532 3.3e-07 60.5 277 26.4
Dinv37095 Davidia involucrata HOM05D003987 ORTHO05D004532 4.3e-07 60.1 389 25.7
FAN02G3471 Fragaria x ananassa HOM05D003987 ORTHO05D004532 4.3e-07 60.1 371 26.7
AT3G54060 Arabidopsis thaliana HOM05D003987 ORTHO05D004532 5.6e-07 59.7 99 37.4
BraA07t29878Z Brassica rapa HOM05D003987 ORTHO05D004532 7.3e-07 59.3 266 28.9
AUR62025345 Chenopodium quinoa HOM05D003987 ORTHO05D004532 7.3e-07 59.3 267 28.1
Gohir.D04G127200 Gossypium hirsutum HOM05D003987 ORTHO05D004532 7.3e-07 59.3 389 26.5
SEGI_16848 Sequoiadendron giganteum HOM05D003987 ORTHO05D004532 1.2e-06 58.5 226 27.9
Cc06_g01840 Coffea canephora HOM05D003987 ORTHO05D004532 1.6e-06 58.2 398 25.6
TPR.G34870 Trifolium pratense HOM05D003987 ORTHO05D004532 2.1e-06 57.8 356 29.2
unitig_749.g14175 Utricularia gibba HOM05D003987 ORTHO05D004532 2.1e-06 57.8 132 31.8
Migut.J00243 Erythranthe guttata HOM05D003987 ORTHO05D004532 2.8e-06 57.4 373 26.3
MBI14_g28607_MAGBIO Magnolia biondii HOM05D003987 ORTHO05D004532 2.8e-06 57.4 242 27.7
CSS0016809 Camellia sinensis var. sinensis HOM05D003987 ORTHO05D004532 3.6e-06 57.0 177 29.4
CSS0027188 Camellia sinensis var. sinensis HOM05D003987 ORTHO05D004532 3.6e-06 57.0 177 29.4
HanXRQChr01g0001271 Helianthus annuus HOM05D003987 ORTHO05D004532 3.6e-06 57.0 350 25.1
Nitab4.5_0002152g0110 Nicotiana tabacum HOM05D003987 ORTHO05D004532 3.6e-06 57.0 133 32.3
Nitab4.5_0017865g0010 Nicotiana tabacum HOM05D003987 ORTHO05D004532 3.6e-06 57.0 360 26.4
TWI77G0200 Tripterygium wilfordii HOM05D003987 ORTHO05D004532 3.6e-06 57.0 384 25.0


User provided reference genes

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