Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G257200 Phaseolus vulgaris HOM05D008433 ORTHO05D009918 3.6e-76 288.1 141 100.0
VMungo1309G0842 Vigna mungo HOM05D008433 ORTHO05D009918 1.5e-53 213.0 142 77.5
Glyma.19G259100 Glycine max HOM05D008433 ORTHO05D009918 3.8e-41 171.8 144 63.9
Lj1g0005818 Lotus japonicus HOM05D008433 ORTHO05D009918 1.2e-18 97.1 147 44.9
TPR.G22611 Trifolium pratense HOM05D008433 ORTHO05D009918 1.5e-18 96.7 136 48.5
Psat3g000840 Pisum sativum HOM05D008433 ORTHO05D009918 2.3e-14 82.8 156 41.7
AT2G46735 Arabidopsis thaliana HOM05D008433 ORTHO05D009918 1.3e-12 77.0 115 43.5
BcaB06g29468 Brassica carinata HOM05D008433 ORTHO05D009918 1.3e-12 77.0 137 35.8
BcaC02g07009 Brassica carinata HOM05D008433 ORTHO05D009918 1.3e-12 77.0 137 35.8
CARHR142080 Cardamine hirsuta HOM05D008433 ORTHO05D009918 1.7e-12 76.6 111 43.2
Cfa004661 Carpinus fangiana HOM05D008433 ORTHO05D009918 2.2e-12 76.3 119 38.7
AL4G46200 Arabidopsis lyrata HOM05D008433 ORTHO05D009918 4.8e-12 75.1 161 37.3
Carub.0004s2944 Capsella rubella HOM05D008433 ORTHO05D009918 6.3e-12 74.7 111 42.3
Thhalv10001667m.g Eutrema salsugineum HOM05D008433 ORTHO05D009918 8.2e-12 74.3 114 38.6
Oeu046652.1 Olea europaea HOM05D008433 ORTHO05D009918 1.1e-11 73.9 96 42.7
Duzib138G0947 Durio zibethinus HOM05D008433 ORTHO05D009918 1.8e-11 73.2 104 41.3
TWI14G1180 Tripterygium wilfordii HOM05D008433 ORTHO05D009918 1.2e-10 70.5 131 34.4
Manes.05G017500 Manihot esculenta HOM05D008433 ORTHO05D009918 1.6e-10 70.1 77 49.4
Thecc.01G334700 Theobroma cacao HOM05D008433 ORTHO05D009918 1.6e-10 70.1 82 46.3
BolC4t21776H Brassica oleracea HOM05D000145 ORTHO05D013968 2.0e-10 69.7 111 38.7
arahy.Tifrunner.gnm1.ann1.TN0QSJ Arachis hypogaea HOM05D032367 ORTHO05D009918 4.5e-10 68.6 139 41.0
A05p01070 Brassica napus HOM05D000145 ORTHO05D013968 4.5e-10 68.6 111 37.8
BraA05t19107Z Brassica rapa HOM05D000145 ORTHO05D013968 4.5e-10 68.6 111 37.8
arahy.Tifrunner.gnm1.ann1.2VFH9L Arachis hypogaea HOM05D032367 ORTHO05D009918 1.0e-09 67.4 138 39.9
CiPaw.01G081400 Carya illinoinensis HOM05D008433 ORTHO05D009918 1.0e-09 67.4 154 34.4
BcaNung03892 Brassica carinata HOM05D008433 ORTHO05D009918 1.3e-09 67.0 93 33.3
Cpa.g.sc141.14 Carica papaya HOM05D008433 ORTHO05D009918 1.3e-09 67.0 77 42.9
Lalb_Chr18g0044671 Lupinus albus HOM05D008433 ORTHO05D009918 1.7e-09 66.6 148 34.5
Ca_09539_v3 Cicer arietinum L. HOM05D032367 ORTHO05D009918 2.2e-09 66.2 56 60.7
Sed0019953 Sechium edule HOM05D029570 ORTHO05D009918 2.9e-09 65.9 100 37.0
BcaC02g07007 Brassica carinata HOM05D008433 ORTHO05D009918 3.8e-09 65.5 139 33.8
BcaC02g12646 Brassica carinata HOM05D008433 ORTHO05D009918 5.0e-09 65.1 111 35.1
A04p34600 Brassica napus HOM05D008433 ORTHO05D009918 5.0e-09 65.1 139 31.7
BraA04t18918Z Brassica rapa HOM05D008433 ORTHO05D009918 5.0e-09 65.1 139 31.7
Aa31LG1G28120 Aethionema arabicum HOM05D008433 ORTHO05D009918 6.5e-09 64.7 87 40.2
C04p72390 Brassica napus HOM05D008433 ORTHO05D009918 6.5e-09 64.7 139 32.4
BolC4t28725H Brassica oleracea HOM05D008433 ORTHO05D009918 6.5e-09 64.7 139 32.4
Gohir.D11G104900 Gossypium hirsutum HOM05D008433 ORTHO05D009918 6.5e-09 64.7 73 46.6
Gorai.007G112200 Gossypium raimondii HOM05D008433 ORTHO05D009918 6.5e-09 64.7 73 46.6
Prupe.2G196100 Prunus persica HOM05D013717 ORTHO05D009918 6.5e-09 64.7 155 33.5
Gohir.A11G100200 Gossypium hirsutum HOM05D008433 ORTHO05D009918 8.5e-09 64.3 73 46.6
Ah.05g179030 Amaranthus hybridus HOM05D008433 ORTHO05D009918 1.1e-08 63.9 162 31.5
PGR031G3198 Punica granatum HOM05D008433 ORTHO05D009918 1.1e-08 63.9 107 37.4
Oeu015062.1 Olea europaea HOM05D008433 ORTHO05D009918 1.5e-08 63.5 93 40.9
AUR62022666 Chenopodium quinoa HOM05D008433 ORTHO05D009918 1.9e-08 63.2 158 31.0
C04p01210 Brassica napus HOM05D000145 ORTHO05D013968 3.2e-08 62.4 115 34.8
Potri.002G178100 Populus trichocarpa HOM05D008433 ORTHO05D009918 3.2e-08 62.4 78 43.6
AUR62004552 Chenopodium quinoa HOM05D008433 ORTHO05D009918 5.5e-08 61.6 139 30.2
CsaV3_6G008920 Cucumis sativus L. HOM05D029570 ORTHO05D009918 9.4e-08 60.8 111 35.1
Nn1g00412 Nelumbo nucifera HOM05D033573 ORTHO05D009918 1.6e-07 60.1 77 41.6
Sabra02G0135500 Salix brachista HOM05D008433 ORTHO05D009918 2.1e-07 59.7 100 37.0
Actinidia28092 Actinidia chinensis HOM05D013717 ORTHO05D009918 4.7e-07 58.5 123 33.3
CANSAT56G3323 Cannabis sativa HOM05D013717 ORTHO05D009918 1.0e-06 57.4 86 37.2
Ciclev10023317m.g Citrus clementina HOM05D008433 ORTHO05D009918 1.0e-06 57.4 131 35.1
Atru.chr5.753 Acer truncatum HOM05D008433 ORTHO05D009918 1.8e-06 56.6 147 35.4
FAN06G2608 Fragaria x ananassa HOM05D013717 ORTHO05D009918 6.7e-06 54.7 77 42.9
ClCG06G002750 Citrullus lanatus HOM05D029570 ORTHO05D009918 8.8e-06 54.3 114 30.7


User provided reference genes

Program Settings