Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G250900 Phaseolus vulgaris HOM05D010475 ORTHO05D012619 2.8e-44 181.4 84 100.0
Glyma.15G151200 Glycine max HOM05D010475 ORTHO05D012619 7.8e-34 146.7 83 83.1
Glyma.09G041951 Glycine max HOM05D010475 ORTHO05D012619 4.7e-31 137.5 83 78.3
Glyma.15G151100 Glycine max HOM05D010475 ORTHO05D012619 1.2e-29 132.9 79 84.8
Lalb_Chr07g0182301 Lupinus albus HOM05D010475 ORTHO05D012619 5.0e-25 117.5 81 69.1
TPR.G3167 Trifolium pratense HOM05D010475 ORTHO05D012619 6.8e-22 107.1 75 66.7
Medtr4g120300 Medicago truncatula HOM05D010475 ORTHO05D012619 1.9e-19 99.0 81 61.7
Lj6g0014750 Lotus japonicus HOM05D010475 ORTHO05D012619 1.6e-18 95.9 87 59.8
Ca_21478_v3 Cicer arietinum L. HOM05D010475 ORTHO05D012619 1.3e-17 92.8 91 54.9
Glyma.07G245200 Glycine max HOM05D010475 ORTHO05D012619 5.6e-16 87.4 81 56.8
Phvul.009G251200 Phaseolus vulgaris HOM05D010475 ORTHO05D012619 2.8e-15 85.1 85 52.9
Glyma.09G041750 Glycine max HOM05D010475 ORTHO05D012619 4.7e-15 84.3 86 55.8
Glyma.15G151600 Glycine max HOM05D010475 ORTHO05D012619 6.8e-14 80.5 86 55.8
arahy.Tifrunner.gnm1.ann1.6T77XB Arachis hypogaea HOM05D010475 ORTHO05D012619 2.2e-12 75.5 86 47.7
Lj6g0009487 Lotus japonicus HOM05D010475 ORTHO05D012619 2.9e-12 75.1 83 49.4
arahy.Tifrunner.gnm1.ann1.GY143M Arachis hypogaea HOM05D010475 ORTHO05D012619 1.4e-11 72.8 84 47.6
Lj4g0001421 Lotus japonicus HOM05D010475 ORTHO05D012619 2.4e-11 72.0 53 58.5
Medtr2g435690 Medicago truncatula HOM05D010475 ORTHO05D012619 2.4e-11 72.0 83 47.0
Medtr2g435720 Medicago truncatula HOM05D010475 ORTHO05D012619 2.4e-11 72.0 83 47.0
VMungo1309G2611 Vigna mungo HOM05D010475 ORTHO05D012619 7.1e-11 70.5 84 47.6
Psat0s1652g0120 Pisum sativum HOM05D010475 ORTHO05D012619 3.0e-09 65.1 83 43.4
Lj6g0013198 Lotus japonicus HOM05D022439 ORTHO05D015414 3.3e-08 61.6 84 46.4
Glyma.09G041900 Glycine max HOM05D022439 ORTHO05D015414 5.6e-08 60.8 81 46.9
Glyma.15G151300 Glycine max HOM05D022439 ORTHO05D015414 2.8e-07 58.5 84 39.3
Phvul.009G251000 Phaseolus vulgaris HOM05D025302 ORTHO05D015414 1.1e-06 56.6 81 39.5
Potri.010G007888 Populus trichocarpa HOM05D013500 ORTHO05D013583 1.4e-06 56.2 67 44.8
Potri.010G007943 Populus trichocarpa HOM05D013500 ORTHO05D013583 1.4e-06 56.2 67 44.8
Potri.010G007965 Populus trichocarpa HOM05D013500 ORTHO05D013583 1.4e-06 56.2 67 44.8
Potri.010G010432 Populus trichocarpa HOM05D013500 ORTHO05D013583 1.4e-06 56.2 67 44.8
Potri.010G007899 Populus trichocarpa HOM05D013500 ORTHO05D013583 2.4e-06 55.5 67 44.8
Potri.010G007855 Populus trichocarpa HOM05D013500 ORTHO05D013583 6.9e-06 53.9 70 42.9


User provided reference genes

Program Settings