Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G247500 Phaseolus vulgaris HOM05D006719 ORTHO05D007063 2.3e-38 162.5 142 100.0
VMungo1309G0351 Vigna mungo HOM05D006719 ORTHO05D007063 2.4e-35 152.5 137 86.9
Glyma.15G147300 Glycine max HOM05D006719 ORTHO05D007063 1.2e-26 123.6 139 86.3
Glyma.09G045300 Glycine max HOM05D006719 ORTHO05D007063 6.5e-25 117.9 139 85.6
Psat1g153440 Pisum sativum HOM05D006719 ORTHO05D007063 4.4e-21 105.1 138 81.2
Lj6g0006694 Lotus japonicus HOM05D006719 ORTHO05D007063 2.8e-20 102.4 141 80.9
Lalb_Chr15g0083521 Lupinus albus HOM05D006719 ORTHO05D007063 2.4e-19 99.4 129 83.7
Cfa015380 Carpinus fangiana HOM05D006719 ORTHO05D007063 1.9e-16 89.7 148 45.9
Ca_01942_v3 Cicer arietinum L. HOM05D006719 ORTHO05D007063 4.2e-16 88.6 125 80.0
Potri.010G024600 Populus trichocarpa HOM05D006719 ORTHO05D007063 1.2e-15 87.0 146 68.5
Potri.008G207500 Populus trichocarpa HOM05D006719 ORTHO05D007063 1.8e-14 83.2 135 68.1
CSS0008404 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 2.3e-14 82.8 137 66.4
CSS0019267 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 2.3e-14 82.8 137 66.4
Manes.03G194500 Manihot esculenta HOM05D006719 ORTHO05D007063 3.0e-14 82.4 144 71.5
MD13G1169300 Malus domestica HOM05D006719 ORTHO05D007063 5.2e-14 81.6 137 68.6
Prupe.1G137900 Prunus persica HOM05D006719 ORTHO05D007063 8.9e-14 80.9 131 71.8
Hma1.2p1_2670F.1_g326650 Hydrangea macrophylla HOM05D006719 ORTHO05D007063 1.5e-13 80.1 137 71.5
Dinv44385 Davidia involucrata HOM05D006719 ORTHO05D007063 2.0e-13 79.7 150 67.3
MD16G1170500 Malus domestica HOM05D006719 ORTHO05D007063 2.0e-13 79.7 125 76.0
TPR.G425 Trifolium pratense HOM05D006719 ORTHO05D007063 2.0e-13 79.7 132 79.5
ECA233G1326 Erigeron canadensis HOM05D006719 ORTHO05D007063 1.3e-12 77.0 113 79.6
CiPaw.01G149100 Carya illinoinensis HOM05D006719 ORTHO05D007063 1.7e-12 76.6 149 42.3
Medtr2g436860 Medicago truncatula HOM05D006719 ORTHO05D007063 2.2e-12 76.3 132 74.2
arahy.Tifrunner.gnm1.ann1.WNX5DB Arachis hypogaea HOM05D006719 ORTHO05D007063 2.8e-12 75.9 141 71.6
Gorai.006G263400 Gossypium raimondii HOM05D006719 ORTHO05D007063 6.3e-12 74.7 136 61.8
HanXRQChr08g0227651 Helianthus annuus HOM05D006719 ORTHO05D007063 6.3e-12 74.7 114 78.9
GSVIVG01017752001 Vitis vinifera HOM05D006719 ORTHO05D007063 6.3e-12 74.7 151 68.2
Ciclev10006148m.g Citrus clementina HOM05D006719 ORTHO05D007063 8.3e-12 74.3 134 64.2
Duzib151G0940 Durio zibethinus HOM05D006719 ORTHO05D007063 8.3e-12 74.3 132 64.4
CiPaw.02G083300 Carya illinoinensis HOM05D006719 ORTHO05D007063 1.4e-11 73.6 131 73.3
Duzib212G0625 Durio zibethinus HOM05D006719 ORTHO05D007063 1.4e-11 73.6 130 64.6
Nn4g25876 Nelumbo nucifera HOM05D006719 ORTHO05D007063 1.4e-11 73.6 125 64.8
COL.COLO4_13881 Corchorus olitorius HOM05D006719 ORTHO05D007063 1.8e-11 73.2 132 70.5
Gohir.D10G170100 Gossypium hirsutum HOM05D006719 ORTHO05D007063 1.8e-11 73.2 134 69.4
Gorai.011G189600 Gossypium raimondii HOM05D006719 ORTHO05D007063 1.8e-11 73.2 134 69.4
Nn3g21430 Nelumbo nucifera HOM05D006719 ORTHO05D007063 3.1e-11 72.4 146 67.8
Peaxi162Scf00024g00041 Petunia axillaris HOM05D006719 ORTHO05D007063 3.1e-11 72.4 139 65.5
Thecc.04G284000 Theobroma cacao HOM05D006719 ORTHO05D007063 3.1e-11 72.4 132 69.7
Gohir.A10G163700 Gossypium hirsutum HOM05D006719 ORTHO05D007063 4.1e-11 72.0 134 70.1
Dinv29768 Davidia involucrata HOM05D001303 ORTHO05D001129 7.0e-11 71.2 115 70.4
MSTRG.21797 Avicennia marina HOM05D006719 ORTHO05D007063 9.2e-11 70.9 143 55.2
PSO170G6252 Papaver somniferum HOM05D006719 ORTHO05D007063 9.2e-11 70.9 138 71.0
Actinidia40259 Actinidia chinensis HOM05D006719 ORTHO05D007063 2.0e-10 69.7 139 69.1
arahy.Tifrunner.gnm1.ann1.XR1IK3 Arachis hypogaea HOM05D006719 ORTHO05D007063 2.0e-10 69.7 122 76.2
DCAR_030531 Daucus carota HOM05D006719 ORTHO05D007063 4.5e-10 68.6 112 65.2
Carub.0007s2587 Capsella rubella HOM05D006719 ORTHO05D007063 5.9e-10 68.2 134 66.4
TAR362G0876 Trochodendron aralioides HOM05D006719 ORTHO05D007063 5.9e-10 68.2 115 77.4
Gohir.D09G240400 Gossypium hirsutum HOM05D006719 ORTHO05D007063 7.8e-10 67.8 109 74.3
vmacro08144 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 1.0e-09 67.4 143 63.6
vmacro22972 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 1.0e-09 67.4 143 63.6
Gohir.A09G239500 Gossypium hirsutum HOM05D006719 ORTHO05D007063 1.3e-09 67.0 109 71.6
Peaxi162Scf00534g00017 Petunia axillaris HOM05D006719 ORTHO05D007063 1.3e-09 67.0 149 36.9
Peaxi162Scf00024g00231 Petunia axillaris HOM05D006719 ORTHO05D007063 2.3e-09 66.2 133 67.7
TWI09G1121 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 3.8e-09 65.5 148 64.9
Oeu037752.1 Olea europaea HOM05D006719 ORTHO05D007063 6.6e-09 64.7 144 63.9
RcHm_v2.0_Chr4g0422101 Rosa chinensis HOM05D006719 ORTHO05D007063 6.6e-09 64.7 134 68.7
Atru.chr4.2828 Acer truncatum HOM05D006719 ORTHO05D007063 8.6e-09 64.3 145 63.4
Sopen01g028510 Solanum pennellii HOM05D006719 ORTHO05D007063 8.6e-09 64.3 141 64.5
FAN12G0915 Fragaria x ananassa HOM05D006719 ORTHO05D007063 1.5e-08 63.5 112 75.9
Solyc01g066900.4 Solanum lycopersicum HOM05D006719 ORTHO05D007063 1.5e-08 63.5 141 61.7
Duzib052G0445 Durio zibethinus HOM05D006719 ORTHO05D007063 2.5e-08 62.8 131 70.2
PSO210G7501 Papaver somniferum HOM05D006719 ORTHO05D007063 2.5e-08 62.8 138 68.8
Sed0000550 Sechium edule HOM05D006719 ORTHO05D007063 2.5e-08 62.8 131 70.2
Sed0003703 Sechium edule HOM05D006719 ORTHO05D007063 2.5e-08 62.8 132 68.9
THA.LOC104821772 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 2.5e-08 62.8 130 56.9
Manes.15G012900 Manihot esculenta HOM05D006719 ORTHO05D007063 3.3e-08 62.4 148 66.2
QL06p008791 Quercus lobata HOM05D006719 ORTHO05D007063 3.3e-08 62.4 130 70.0
ClCG05G006040 Citrullus lanatus HOM05D006719 ORTHO05D007063 4.3e-08 62.0 133 69.2
FvH4_4g17930 Fragaria vesca HOM05D006719 ORTHO05D007063 4.3e-08 62.0 130 67.7
FAN12G0931 Fragaria x ananassa HOM05D006719 ORTHO05D007063 5.6e-08 61.6 149 60.4
Lsat_1_v5_gn_6_15060 Lactuca sativa HOM05D006719 ORTHO05D007063 1.2e-07 60.5 113 78.8
CANSAT78G1100 Cannabis sativa HOM05D006719 ORTHO05D007063 2.8e-07 59.3 52 69.2
Cpa.g.sc16.165 Carica papaya HOM05D006719 ORTHO05D007063 3.6e-07 58.9 38 76.3
Sc19g0005170 Simmondsia chinensis HOM05D006719 ORTHO05D007063 3.6e-07 58.9 147 65.3
PGSC0003DMG400011322 Solanum tuberosum HOM05D006719 ORTHO05D007063 4.7e-07 58.5 143 66.4
TWI53G1176 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 4.7e-07 58.5 147 65.3
Ah.04g153870 Amaranthus hybridus HOM05D006719 ORTHO05D007063 6.1e-07 58.2 141 63.1
CsaV3_3G014580 Cucumis sativus L. HOM05D006719 ORTHO05D007063 8.0e-07 57.8 140 67.1
FAN07G2874 Fragaria x ananassa HOM05D006719 ORTHO05D007063 8.0e-07 57.8 125 36.0
Hund20562 Selenicereus undatus HOM05D006719 ORTHO05D007063 8.0e-07 57.8 138 53.6
SGA_v2.0_scaffold147G36286 Striga asiatica HOM05D006719 ORTHO05D007063 1.4e-06 57.0 51 64.7
Zm00001eb137600 Zea mays HOM05D006719 ORTHO05D007063 1.4e-06 57.0 101 55.4
BraA08t33189Z Brassica rapa HOM05D006719 ORTHO05D007063 1.8e-06 56.6 116 62.9
Migut.G00270 Erythranthe guttata HOM05D006719 ORTHO05D007063 1.8e-06 56.6 87 75.9
TAR365G1095 Trochodendron aralioides HOM05D006719 ORTHO05D007063 1.8e-06 56.6 124 71.0
MELO3C006659.2 Cucumis melo HOM05D006719 ORTHO05D007063 3.0e-06 55.8 151 63.6
THA.LOC104820261 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 4.0e-06 55.5 45 66.7
AL7G39510 Arabidopsis lyrata HOM05D006719 ORTHO05D007063 5.2e-06 55.1 140 62.9
Aqoxy2G03000 Aquilegia oxysepala HOM05D000520 ORTHO05D000399 6.8e-06 54.7 137 61.3
Sabra10G0014400 Salix brachista HOM05D006719 ORTHO05D007063 6.8e-06 54.7 164 35.4
FAN17G0015 Fragaria x ananassa HOM05D006719 ORTHO05D007063 8.9e-06 54.3 156 32.1


User provided reference genes

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