Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G246800 Phaseolus vulgaris HOM05D006081 ORTHO05D007628 2.0e-104 382.5 196 100.0
VMungo1309G0529 Vigna mungo HOM05D006081 ORTHO05D007628 6.8e-97 357.5 196 93.4
Glyma.15G153100 Glycine max HOM05D006081 ORTHO05D007628 2.8e-90 335.5 196 87.8
Glyma.09G045900 Glycine max HOM05D006081 ORTHO05D007628 9.8e-88 327.0 196 85.7
Lj6g0000146 Lotus japonicus HOM05D006081 ORTHO05D007628 4.3e-83 311.6 196 81.1
Psat1g153280 Pisum sativum HOM05D006081 ORTHO05D007628 1.1e-75 287.0 196 74.5
Ca_01966_v3 Cicer arietinum L. HOM05D006081 ORTHO05D007628 9.5e-75 283.9 196 75.5
Medtr2g436940 Medicago truncatula HOM05D006081 ORTHO05D007628 2.8e-74 282.3 199 75.4
Lalb_Chr18g0051761 Lupinus albus HOM05D006081 ORTHO05D007628 6.4e-71 271.2 199 72.4
Cfa015373 Carpinus fangiana HOM05D006081 ORTHO05D007628 2.6e-64 249.2 193 68.4
Lalb_Chr20g0114491 Lupinus albus HOM05D006081 ORTHO05D007628 2.6e-64 249.2 197 67.5
arahy.Tifrunner.gnm1.ann1.EZB5Q6 Arachis hypogaea HOM05D006081 ORTHO05D007628 5.8e-64 248.1 197 67.5
CiPaw.01G149700 Carya illinoinensis HOM05D006081 ORTHO05D007628 2.9e-63 245.7 194 67.5
arahy.Tifrunner.gnm1.ann1.TA2ZSY Arachis hypogaea HOM05D006081 ORTHO05D007628 1.4e-62 243.4 197 67.0
Manes.15G013500 Manihot esculenta HOM05D006081 ORTHO05D007628 1.6e-61 240.0 194 66.0
Prupe.1G138200 Prunus persica HOM05D006081 ORTHO05D007628 1.6e-61 240.0 201 64.7
PGR031G1107 Punica granatum HOM05D006081 ORTHO05D007628 1.7e-60 236.5 192 64.1
Manes.03G194000 Manihot esculenta HOM05D006081 ORTHO05D007628 2.5e-59 232.6 195 64.1
CiPaw.02G083900 Carya illinoinensis HOM05D006081 ORTHO05D007628 3.3e-59 232.3 194 63.9
Atru.chr4.2827 Acer truncatum HOM05D006081 ORTHO05D007628 4.3e-59 231.9 190 66.8
Eucgr.H03897 Eucalyptus grandis HOM05D006081 ORTHO05D007628 5.6e-59 231.5 188 62.2
QL06p008580 Quercus lobata HOM05D006081 ORTHO05D007628 9.5e-59 230.7 192 65.1
Cpa.g.sc16.161 Carica papaya HOM05D006081 ORTHO05D007628 2.1e-58 229.6 188 62.2
CANSAT78G1428 Cannabis sativa HOM05D006081 ORTHO05D007628 8.1e-58 227.6 193 65.3
RcHm_v2.0_Chr4g0421971 Rosa chinensis HOM05D006081 ORTHO05D007628 1.1e-57 227.3 192 61.5
CSS0030149 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 3.1e-57 225.7 192 64.1
Potri.008G210100 Populus trichocarpa HOM05D006081 ORTHO05D007628 6.8e-57 224.6 191 62.3
FvH4_4g17860 Fragaria vesca HOM05D006081 ORTHO05D007628 3.4e-56 222.2 195 60.5
Rhsim04G0220300 Rhododendron simsii HOM05D006081 ORTHO05D007628 9.9e-56 220.7 196 63.8
TWI53G0242 Tripterygium wilfordii HOM05D006081 ORTHO05D007628 9.9e-56 220.7 191 60.7
Actinidia40266 Actinidia chinensis HOM05D006081 ORTHO05D007628 1.3e-55 220.3 190 63.7
ClCG06G005230 Citrullus lanatus HOM05D006081 ORTHO05D007628 1.3e-55 220.3 197 59.9
CsaV3_6G017270 Cucumis sativus L. HOM05D006081 ORTHO05D007628 1.3e-55 220.3 192 62.5
Dinv29771 Davidia involucrata HOM05D006081 ORTHO05D007628 1.7e-55 219.9 194 63.9
FAN12G2613 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.7e-55 219.9 195 60.0
Sabra08G0154300 Salix brachista HOM05D006081 ORTHO05D007628 2.2e-55 219.5 191 61.8
vmacro08134 Vaccinium macrocarpon HOM05D006081 ORTHO05D007628 2.2e-55 219.5 192 62.0
MD16G1171400 Malus domestica HOM05D006081 ORTHO05D007628 2.9e-55 219.2 194 61.3
MELO3C021343.2 Cucumis melo HOM05D006081 ORTHO05D007628 3.8e-55 218.8 192 62.5
FAN17G1774 Fragaria x ananassa HOM05D006081 ORTHO05D007628 3.8e-55 218.8 192 60.4
Thecc.04G283000 Theobroma cacao HOM05D006081 ORTHO05D007628 8.4e-55 217.6 190 61.6
GSVIVG01017744001 Vitis vinifera HOM05D006081 ORTHO05D007628 1.9e-54 216.5 191 60.7
FAN07G2255 Fragaria x ananassa HOM05D006081 ORTHO05D007628 3.2e-54 215.7 192 60.4
TAR636G3617 Trochodendron aralioides HOM05D006081 ORTHO05D007628 7.1e-54 214.5 194 61.3
TPR.G26808 Trifolium pratense HOM05D006081 ORTHO05D007628 4.6e-53 211.8 138 76.8
Duzib151G0152 Durio zibethinus HOM05D006081 ORTHO05D007628 3.0e-52 209.1 190 56.8
Sed0014998 Sechium edule HOM05D006081 ORTHO05D007628 3.9e-52 208.8 193 60.1
Cc00_g10580 Coffea canephora HOM05D006081 ORTHO05D007628 1.1e-51 207.2 192 56.8
MBI19_g30830_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 9.6e-51 204.1 196 53.6
TAR365G0221 Trochodendron aralioides HOM05D006081 ORTHO05D007628 1.2e-50 203.8 164 65.2
Gohir.D02G054100 Gossypium hirsutum HOM05D006081 ORTHO05D007628 2.8e-50 202.6 188 58.0
Gorai.005G059600 Gossypium raimondii HOM05D006081 ORTHO05D007628 2.8e-50 202.6 188 58.0
SGA_v2.0_scaffold55G19699 Striga asiatica HOM05D006081 ORTHO05D007628 2.8e-50 202.6 195 55.4
PSO210G2816 Papaver somniferum HOM05D006081 ORTHO05D007628 8.1e-50 201.1 191 59.2
Ciclev10005978m.g Citrus clementina HOM05D006081 ORTHO05D007628 1.1e-49 200.7 191 57.1
Migut.N00097 Erythranthe guttata HOM05D006081 ORTHO05D007628 1.1e-49 200.7 194 56.7
Nitab4.5_0003749g0060 Nicotiana tabacum HOM05D006081 ORTHO05D007628 1.1e-49 200.7 191 58.6
Nitab4.5_0003972g0010 Nicotiana tabacum HOM05D006081 ORTHO05D007628 1.4e-49 200.3 191 58.1
SalBow5G1281 Salvia bowleyana HOM05D006081 ORTHO05D007628 1.8e-49 199.9 193 53.9
PSO170G3586 Papaver somniferum HOM05D006081 ORTHO05D007628 2.4e-49 199.5 191 58.1
HanXRQChr03g0079991 Helianthus annuus HOM05D006081 ORTHO05D007628 4.0e-49 198.7 197 56.3
Peaxi162Scf00534g00212 Petunia axillaris HOM05D006081 ORTHO05D007628 4.0e-49 198.7 191 55.5
Gohir.A02G048800 Gossypium hirsutum HOM05D006081 ORTHO05D007628 5.3e-49 198.4 188 56.9
Oeu027733.1 Olea europaea HOM05D006081 ORTHO05D007628 1.2e-48 197.2 191 57.1
Aa31LG8G8110 Aethionema arabicum HOM05D006081 ORTHO05D007628 2.0e-48 196.4 193 54.9
PGSC0003DMG400022662 Solanum tuberosum HOM05D006081 ORTHO05D007628 5.8e-48 194.9 192 56.2
MSTRG.21799 Avicennia marina HOM05D006081 ORTHO05D007628 1.3e-47 193.7 193 53.9
Lj6A673G88 Lonicera japonica HOM05D006081 ORTHO05D007628 2.9e-47 192.6 135 67.4
Sc13g0003510 Simmondsia chinensis HOM05D006081 ORTHO05D007628 2.9e-47 192.6 194 53.6
Thhalv10021583m.g Eutrema salsugineum HOM05D006081 ORTHO05D007628 3.8e-47 192.2 190 55.3
Solyc01g067080.3 Solanum lycopersicum HOM05D006081 ORTHO05D007628 6.4e-47 191.4 193 51.8
Sopen01g028790 Solanum pennellii HOM05D006081 ORTHO05D007628 8.4e-47 191.0 192 52.6
CARHR097370 Cardamine hirsuta HOM05D006081 ORTHO05D007628 1.9e-46 189.9 193 53.9
DCAR_030534 Daucus carota HOM05D006081 ORTHO05D007628 1.9e-46 189.9 194 53.6
ECA240G0281 Erigeron canadensis HOM05D006081 ORTHO05D007628 3.2e-46 189.1 196 54.6
THA.LOC104820251 Tarenaya hassleriana HOM05D006081 ORTHO05D007628 3.2e-46 189.1 190 52.6
Lsat_1_v5_gn_5_49301 Lactuca sativa HOM05D006081 ORTHO05D007628 1.2e-45 187.2 192 54.2
BcaC01g03506 Brassica carinata HOM05D006081 ORTHO05D007628 7.8e-45 184.5 190 52.1
BolC3t17454H Brassica oleracea HOM05D006081 ORTHO05D007628 7.8e-45 184.5 190 52.1
Sp3g19430 Schrenkiella parvula HOM05D006081 ORTHO05D007628 7.8e-45 184.5 190 52.1
Carub.0003s2143 Capsella rubella HOM05D006081 ORTHO05D007628 1.0e-44 184.1 194 51.5
AL3G35480 Arabidopsis lyrata HOM05D006081 ORTHO05D007628 2.3e-44 183.0 192 53.6
AT3G21400 Arabidopsis thaliana HOM05D006081 ORTHO05D007628 3.9e-44 182.2 192 52.6
C03p51690 Brassica napus HOM05D006081 ORTHO05D007628 5.1e-44 181.8 190 51.1
BraA03t13376Z Brassica rapa HOM05D006081 ORTHO05D007628 8.7e-44 181.0 190 51.1
A03p42230 Brassica napus HOM05D006081 ORTHO05D007628 1.1e-43 180.6 190 51.1
Oeu023291.2 Olea europaea HOM05D006081 ORTHO05D007628 2.5e-43 179.5 231 46.8
unitig_26.g10542 Utricularia gibba HOM05D006081 ORTHO05D007628 9.6e-43 177.6 196 49.0
FAN12G2474 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.6e-42 176.8 115 72.2
BcaB04g19166 Brassica carinata HOM05D006081 ORTHO05D007628 6.2e-42 174.9 193 50.8
Aqoxy2G03026 Aquilegia oxysepala HOM05D006081 ORTHO05D007628 1.8e-41 173.3 134 63.4
CDE02G2676 Ceratophyllum demersum HOM05D006081 ORTHO05D000739 4.0e-41 172.2 196 50.0
CSS0018730 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 1.5e-40 170.2 116 69.0
AUR62043167 Chenopodium quinoa HOM05D006081 ORTHO05D007628 9.9e-40 167.5 133 58.6
EL10Ac3g06586 Beta vulgaris HOM05D006081 ORTHO05D007628 3.8e-39 165.6 191 46.6
BcaC05g28170 Brassica carinata HOM05D006081 ORTHO05D007628 1.4e-38 163.7 190 48.4
C05p42070 Brassica napus HOM05D006081 ORTHO05D007628 1.4e-38 163.7 190 48.4
BolC5t32937H Brassica oleracea HOM05D006081 ORTHO05D007628 1.4e-38 163.7 190 48.4
CDE09G1305 Ceratophyllum demersum HOM05D006081 ORTHO05D007628 1.4e-38 163.7 194 48.5
BcaB06g26235 Brassica carinata HOM05D006081 ORTHO05D007628 2.4e-38 162.9 190 49.5
CAN.G556.12 Capsicum annuum HOM05D006081 ORTHO05D007628 2.3e-36 156.4 110 67.3
AUR62036825 Chenopodium quinoa HOM05D006081 ORTHO05D007628 3.0e-36 156.0 135 57.0
ATR0706G092 Amborella trichopoda HOM05D006081 ORTHO05D007628 9.0e-33 144.4 125 59.2
A05p27230 Brassica napus HOM05D006081 ORTHO05D007628 3.4e-32 142.5 174 46.0
BraA05t21612Z Brassica rapa HOM05D006081 ORTHO05D007628 3.4e-32 142.5 174 46.6
TAR365G0700 Trochodendron aralioides HOM05D006081 ORTHO05D007628 2.9e-31 139.4 94 71.3
Os12g0540700 Oryza sativa ssp. japonica HOM05D006081 ORTHO05D007628 1.2e-29 134.0 192 40.6
Zm00001eb410420 Zea mays HOM05D006081 ORTHO05D007628 3.9e-28 129.0 194 39.7
MD13G1169900 Malus domestica HOM05D006081 ORTHO05D007628 1.5e-27 127.1 130 58.5
Haze_01224 Corylus avellana HOM05D006081 ORTHO05D007628 2.5e-27 126.3 83 71.1
MBI19_g12810_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 4.3e-27 125.6 100 56.0
SEGI_25455 Sequoiadendron giganteum HOM05D006081 ORTHO05D007628 4.3e-27 125.6 184 40.2
Actinidia01470 Actinidia chinensis HOM05D006081 ORTHO05D007628 7.4e-27 124.8 192 43.2
HPP92_001321 Vanilla planifolia HOM05D006081 ORTHO05D007628 4.8e-26 122.1 196 41.3
AUR62038616 Chenopodium quinoa HOM05D006081 ORTHO05D007628 9.0e-25 117.9 92 57.6
CSS0011440 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 5.5e-22 108.6 110 54.5
Haze_01225 Corylus avellana HOM05D006081 ORTHO05D007628 4.6e-21 105.5 100 62.0
Potri.010G024000 Populus trichocarpa HOM05D006081 ORTHO05D007628 1.8e-20 103.6 64 76.6
Pp3c1_29830 Physcomitrium patens HOM05D006081 ORTHO05D007628 3.4e-16 89.4 122 41.0
Mapoly0041s0011 Marchantia polymorpha HOM05D006081 ORTHO05D007628 1.4e-14 84.0 179 33.0
FAN22G0279 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.9e-14 83.6 98 53.1
Nn5g30060 Nelumbo nucifera HOM05D006081 ORTHO05D007628 6.1e-13 78.6 101 47.5
AagrBONN_evm.TU.Sc2ySwM_368.2309 Anthoceros agrestis HOM05D006081 ORTHO05D007628 5.7e-11 72.0 180 30.0
CBR_g29894 Chara braunii HOM05D008095 ORTHO05D010826 3.7e-10 69.3 115 33.0
BolC7t43135H Brassica oleracea HOM05D006081 ORTHO05D033520 2.6e-08 63.2 49 59.2
arahy.Tifrunner.gnm1.ann1.LB6QPX Arachis hypogaea HOM05D006081 ORTHO05D007628 1.4e-06 57.4 45 62.2
Hma1.2p1_1676F.1_g297010 Hydrangea macrophylla HOM05D006081 ORTHO05D007628 1.4e-06 57.4 38 71.1


User provided reference genes

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