Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G245900 Phaseolus vulgaris HOM05D006881 ORTHO05D008423 6.5e-66 254.2 158 100.0
VMungo1309G2079 Vigna mungo HOM05D006881 ORTHO05D008423 5.7e-54 214.5 167 85.0
Glyma.09G046900 Glycine max HOM05D006881 ORTHO05D008423 1.0e-50 203.8 162 82.1
Glyma.15G154400 Glycine max HOM05D006881 ORTHO05D008423 2.7e-48 195.7 158 83.5
Lalb_Chr18g0051811 Lupinus albus HOM05D006881 ORTHO05D008423 5.2e-47 191.4 155 78.7
Psat1g151960 Pisum sativum HOM05D006881 ORTHO05D008423 2.4e-44 182.6 154 75.3
Lj6g0021421 Lotus japonicus HOM05D006881 ORTHO05D008423 4.1e-44 181.8 158 77.2
arahy.Tifrunner.gnm1.ann1.E8HU74 Arachis hypogaea HOM05D006881 ORTHO05D008423 2.7e-43 179.1 162 76.5
arahy.Tifrunner.gnm1.ann1.NXX1KJ Arachis hypogaea HOM05D006881 ORTHO05D008423 5.9e-43 177.9 191 68.6
TPR.G23710 Trifolium pratense HOM05D006881 ORTHO05D008423 8.5e-42 174.1 153 73.2
Ca_02413_v3 Cicer arietinum L. HOM05D002802 ORTHO05D003166 6.1e-40 167.9 116 75.9
GSVIVG01017769001 Vitis vinifera HOM05D006881 ORTHO05D008423 5.2e-39 164.9 163 68.7
vmacro15245 Vaccinium macrocarpon HOM05D006881 ORTHO05D008423 5.7e-38 161.4 158 65.8
Prupe.1G139200 Prunus persica HOM05D006881 ORTHO05D008423 4.9e-37 158.3 160 69.4
Dinv38306 Davidia involucrata HOM05D006881 ORTHO05D008423 1.1e-36 157.1 103 80.6
Duzib212G0198 Durio zibethinus HOM05D006881 ORTHO05D008423 1.8e-36 156.4 114 74.6
Gorai.005G059100 Gossypium raimondii HOM05D006881 ORTHO05D008423 4.1e-36 155.2 109 76.1
Gohir.D02G053300 Gossypium hirsutum HOM05D006881 ORTHO05D008423 5.4e-36 154.8 109 76.1
Thecc.04G282000 Theobroma cacao HOM05D006881 ORTHO05D008423 7.0e-36 154.5 112 75.9
CANSAT78G0809 Cannabis sativa HOM05D006881 ORTHO05D008423 9.2e-36 154.1 163 66.9
Gohir.A02G048200 Gossypium hirsutum HOM05D006881 ORTHO05D008423 9.2e-36 154.1 109 76.1
CiPaw.01G150600 Carya illinoinensis HOM05D006881 ORTHO05D008423 2.0e-35 152.9 167 65.3
PSO170G5464 Papaver somniferum HOM05D006881 ORTHO05D008423 2.0e-35 152.9 117 70.1
CSS0009612 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 3.5e-35 152.1 160 66.9
CAN.G223.19 Capsicum annuum HOM05D006881 ORTHO05D008423 1.3e-34 150.2 114 68.4
Ciclev10005896m.g Citrus clementina HOM05D006881 ORTHO05D008423 1.3e-34 150.2 170 61.2
PSO210G1559 Papaver somniferum HOM05D006881 ORTHO05D008423 1.3e-34 150.2 115 72.2
Medtr2g437470 Medicago truncatula HOM05D006881 ORTHO05D008423 2.9e-34 149.1 107 75.7
THA.LOC104818851 Tarenaya hassleriana HOM05D006881 ORTHO05D008423 5.0e-34 148.3 109 72.5
Sopen01g029530 Solanum pennellii HOM05D006881 ORTHO05D008423 6.6e-34 147.9 157 62.4
CSS0005297 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 8.6e-34 147.5 161 67.1
RcHm_v2.0_Chr4g0421611 Rosa chinensis HOM05D006881 ORTHO05D008423 8.6e-34 147.5 157 67.5
QL06p008283 Quercus lobata HOM05D006881 ORTHO05D008423 1.1e-33 147.1 113 73.5
Atru.chr4.2800 Acer truncatum HOM05D006881 ORTHO05D008423 1.9e-33 146.4 164 66.5
Peaxi162Scf00386g00414 Petunia axillaris HOM05D006881 ORTHO05D008423 5.6e-33 144.8 109 70.6
TAR636G2672 Trochodendron aralioides HOM05D006881 ORTHO05D008423 7.3e-33 144.4 105 71.4
Aa31LG11G11080 Aethionema arabicum HOM05D006881 ORTHO05D008423 2.1e-32 142.9 111 71.2
Solyc01g067580.4 Solanum lycopersicum HOM05D006881 ORTHO05D008423 2.1e-32 142.9 110 66.4
Cc03_g02070 Coffea canephora HOM05D006881 ORTHO05D008423 3.6e-32 142.1 111 68.5
Manes.03G192600 Manihot esculenta HOM05D006881 ORTHO05D008423 3.6e-32 142.1 109 71.6
FvH4_4g17670 Fragaria vesca HOM05D006881 ORTHO05D008423 4.7e-32 141.7 110 69.1
FAN12G2006 Fragaria x ananassa HOM05D006881 ORTHO05D008423 4.7e-32 141.7 110 69.1
FAN12G2996 Fragaria x ananassa HOM05D006881 ORTHO05D008423 4.7e-32 141.7 110 69.1
MBI19_g24002_MAGBIO Magnolia biondii HOM05D006881 ORTHO05D008423 6.1e-32 141.4 114 70.2
MD13G1170800 Malus domestica HOM05D006881 ORTHO05D008423 8.0e-32 141.0 109 70.6
Cpa.g.sc16.153 Carica papaya HOM05D006881 ORTHO05D008423 1.0e-31 140.6 105 70.5
HanXRQChr17g0536111 Helianthus annuus HOM05D006881 ORTHO05D008423 1.0e-31 140.6 104 70.2
Sabra08G0154800 Salix brachista HOM05D006881 ORTHO05D008423 1.0e-31 140.6 158 60.1
PGSC0003DMG400010658 Solanum tuberosum HOM05D006881 ORTHO05D008423 1.0e-31 140.6 157 61.1
CsaV3_3G014430 Cucumis sativus L. HOM05D006881 ORTHO05D008423 1.4e-31 140.2 158 62.7
Potri.008G216700 Populus trichocarpa HOM05D006881 ORTHO05D008423 1.4e-31 140.2 156 60.3
FAN07G1171 Fragaria x ananassa HOM05D006881 ORTHO05D008423 1.8e-31 139.8 110 68.2
FAN17G1543 Fragaria x ananassa HOM05D006881 ORTHO05D008423 1.8e-31 139.8 110 68.2
MSTRG.10082 Avicennia marina HOM05D006881 ORTHO05D008423 2.3e-31 139.4 157 61.1
Lsat_1_v5_gn_3_24181 Lactuca sativa HOM05D006881 ORTHO05D008423 3.0e-31 139.0 113 65.5
Actinidia00041 Actinidia chinensis HOM05D006881 ORTHO05D008423 4.0e-31 138.7 108 72.2
EL10Ac3g06585 Beta vulgaris HOM05D006881 ORTHO05D008423 5.2e-31 138.3 120 60.8
Thhalv10014829m.g Eutrema salsugineum HOM05D006881 ORTHO05D008423 5.2e-31 138.3 114 68.4
Hund20570 Selenicereus undatus HOM05D006881 ORTHO05D008423 5.2e-31 138.3 120 62.5
Carub.0006s1681 Capsella rubella HOM05D006881 ORTHO05D008423 1.5e-30 136.7 110 70.0
ClCG05G005980 Citrullus lanatus HOM05D006881 ORTHO05D008423 1.5e-30 136.7 114 67.5
AT5G18540 Arabidopsis thaliana HOM05D006881 ORTHO05D008423 3.4e-30 135.6 118 69.5
MELO3C006643.2 Cucumis melo HOM05D006881 ORTHO05D008423 3.4e-30 135.6 154 62.3
ECA246G4172 Erigeron canadensis HOM05D006881 ORTHO05D008423 3.4e-30 135.6 108 66.7
Aqoxy2G03052 Aquilegia oxysepala HOM05D006881 ORTHO05D008423 4.4e-30 135.2 108 68.5
TWI09G1277 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 4.4e-30 135.2 159 67.3
A02p04970 Brassica napus HOM05D006881 ORTHO05D008423 5.7e-30 134.8 102 73.5
BraA02t05456Z Brassica rapa HOM05D006881 ORTHO05D008423 5.7e-30 134.8 102 73.5
AL6G29810 Arabidopsis lyrata HOM05D006881 ORTHO05D008423 7.5e-30 134.4 118 68.6
unitig_748.g8741 Utricularia gibba HOM05D006881 ORTHO05D008423 7.5e-30 134.4 115 65.2
BcaC03g13606 Brassica carinata HOM05D006881 ORTHO05D008423 1.3e-29 133.7 102 72.5
C02p10000 Brassica napus HOM05D006881 ORTHO05D008423 1.3e-29 133.7 102 72.5
BcaB05g23335 Brassica carinata HOM05D006881 ORTHO05D008423 1.7e-29 133.3 111 66.7
SGA_v2.0_scaffold86G26903 Striga asiatica HOM05D006881 ORTHO05D008423 1.7e-29 133.3 114 64.0
Oeu021111.1 Olea europaea HOM05D006881 ORTHO05D008423 2.2e-29 132.9 111 66.7
CARHR194480 Cardamine hirsuta HOM05D006881 ORTHO05D008423 3.7e-29 132.1 118 66.1
Sp6g25790 Schrenkiella parvula HOM05D006881 ORTHO05D008423 3.7e-29 132.1 110 67.3
Migut.G00182 Erythranthe guttata HOM05D006881 ORTHO05D008423 6.4e-29 131.3 109 64.2
DCAR_024558 Daucus carota HOM05D006881 ORTHO05D008423 1.1e-28 130.6 113 62.8
Sed0007304 Sechium edule HOM05D006881 ORTHO05D008423 1.1e-28 130.6 155 60.6
SalBow2G0124 Salvia bowleyana HOM05D006881 ORTHO05D008423 2.4e-28 129.4 113 61.1
SalBow2G2956 Salvia bowleyana HOM05D006881 ORTHO05D008423 2.4e-28 129.4 113 61.1
PGR031G0133 Punica granatum HOM05D006881 ORTHO05D008423 4.1e-28 128.6 112 64.3
Eucgr.B01283 Eucalyptus grandis HOM05D006881 ORTHO05D008423 7.0e-28 127.9 99 68.7
BolC2t06902H Brassica oleracea HOM05D006881 ORTHO05D008423 1.6e-27 126.7 106 69.8
CDE09G1155 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 2.0e-27 126.3 113 66.4
Sc19g0005040 Simmondsia chinensis HOM05D006881 ORTHO05D008423 2.0e-27 126.3 126 56.3
Os07g0669600 Oryza sativa ssp. japonica HOM05D006881 ORTHO05D008423 2.7e-27 125.9 101 67.3
HPP92_025214 Vanilla planifolia HOM05D006881 ORTHO05D008423 3.5e-27 125.6 109 66.1
HPP92_025226 Vanilla planifolia HOM05D006881 ORTHO05D008423 3.5e-27 125.6 109 66.1
Hma1.2p1_0698F.1_g205340 Hydrangea macrophylla HOM05D006881 ORTHO05D008423 2.3e-26 122.9 81 81.5
ATR0706G047 Amborella trichopoda HOM05D006881 ORTHO05D008423 5.0e-26 121.7 114 60.5
Rhsim02G0011900 Rhododendron simsii HOM05D006881 ORTHO05D008423 6.6e-26 121.3 84 76.2
Nitab4.5_0013689g0020 Nicotiana tabacum HOM05D006881 ORTHO05D008423 8.6e-26 120.9 88 70.5
Nn3g21363 Nelumbo nucifera HOM05D006881 ORTHO05D008423 3.3e-25 119.0 86 73.3
CSS0034417 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 4.3e-25 118.6 84 75.0
Zm00001eb330210 Zea mays HOM05D006881 ORTHO05D008423 7.3e-25 117.9 110 60.0
SEGI_11441 Sequoiadendron giganteum HOM05D006881 ORTHO05D008423 1.4e-23 113.6 113 54.0
Ah.13g074590 Amaranthus hybridus HOM05D006881 ORTHO05D008423 4.0e-23 112.1 135 49.6
SHI00284 Sapria himalayana HOM05D006881 ORTHO05D008423 6.8e-23 111.3 85 67.1
SMO367G0816 Selaginella moellendorffii HOM05D006881 ORTHO05D008423 2.0e-22 109.8 104 60.6
BraA10t44166Z Brassica rapa HOM05D006881 ORTHO05D008423 1.3e-21 107.1 119 56.3
A10p21020 Brassica napus HOM05D006881 ORTHO05D008423 2.2e-21 106.3 116 56.9
Mapoly0010s0048 Marchantia polymorpha HOM05D006881 ORTHO05D008423 3.7e-21 105.5 118 50.8
Haze_01236 Corylus avellana HOM05D006881 ORTHO05D008423 1.1e-20 104.0 78 74.4
Pp3c15_10020 Physcomitrium patens HOM05D006881 ORTHO05D008423 1.4e-20 103.6 122 51.6
TWI73G0635 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 2.4e-20 102.8 80 70.0
CSS0015929 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 2.7e-19 99.4 170 52.9
CDE02G3907 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 4.3e-17 92.0 89 64.0
AagrBONN_evm.TU.Sc2ySwM_228.1971 Anthoceros agrestis HOM05D006881 ORTHO05D008423 1.5e-14 83.6 96 53.1
AUR62040384 Chenopodium quinoa HOM05D006881 ORTHO05D008423 2.6e-14 82.8 54 72.2
BcaC04g18670 Brassica carinata HOM05D006881 ORTHO05D008423 1.7e-13 80.1 63 69.8
CSS0002463 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 2.9e-13 79.3 108 49.1
CBR_g46646 Chara braunii HOM05D006881 ORTHO05D008423 1.4e-12 77.0 85 49.4
BcaB08g36664 Brassica carinata HOM05D006881 ORTHO05D008423 1.9e-12 76.6 107 43.9
C09p57950 Brassica napus HOM05D006881 ORTHO05D008423 2.3e-10 69.7 103 45.6
BolC9t58662H Brassica oleracea HOM05D006881 ORTHO05D008423 2.3e-10 69.7 103 45.6


User provided reference genes

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