Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G245700 Phaseolus vulgaris HOM05D005256 ORTHO05D006491 2.7e-80 302.4 208 100.0
Glyma.15G154700 Glycine max HOM05D005256 ORTHO05D006491 1.1e-57 227.3 149 85.9
Glyma.09G047200 Glycine max HOM05D005256 ORTHO05D006491 1.9e-57 226.5 148 85.8
Lalb_Chr18g0051841 Lupinus albus HOM05D005256 ORTHO05D006491 4.4e-54 215.3 160 75.6
VMungo1309G1298 Vigna mungo HOM05D005256 ORTHO05D006491 8.3e-53 211.1 134 88.1
Medtr2g437530 Medicago truncatula HOM05D005256 ORTHO05D006491 1.1e-52 210.7 160 73.8
TPR.G31382 Trifolium pratense HOM05D005256 ORTHO05D006491 2.4e-52 209.5 159 74.8
Ca_02405_v3 Cicer arietinum L. HOM05D005256 ORTHO05D006491 3.0e-50 202.6 161 72.7
Lj6g0014214 Lotus japonicus HOM05D005256 ORTHO05D006491 3.9e-50 202.2 147 76.2
Sabra03G0114000 Salix brachista HOM05D005256 ORTHO05D006491 3.9e-50 202.2 156 71.2
Psat1g152160 Pisum sativum HOM05D005256 ORTHO05D006491 3.3e-49 199.1 159 71.1
arahy.Tifrunner.gnm1.ann1.QDE700 Arachis hypogaea HOM05D005256 ORTHO05D006491 5.6e-49 198.4 137 77.4
arahy.Tifrunner.gnm1.ann1.98CSRD Arachis hypogaea HOM05D005256 ORTHO05D006491 7.3e-49 198.0 136 77.9
TWI63G0333 Tripterygium wilfordii HOM05D005256 ORTHO05D006491 9.5e-49 197.6 148 72.3
Nn1g09867 Nelumbo nucifera HOM05D005256 ORTHO05D006491 1.2e-48 197.2 143 74.8
Lalb_Chr15g0083621 Lupinus albus HOM05D005256 ORTHO05D006491 1.6e-48 196.8 137 77.4
Atru.chr10.203 Acer truncatum HOM05D005256 ORTHO05D006491 2.1e-48 196.4 164 69.5
Sabra01G0052200 Salix brachista HOM05D005256 ORTHO05D006491 2.3e-47 193.0 148 71.6
Potri.003G157100 Populus trichocarpa HOM05D005256 ORTHO05D006491 4.0e-47 192.2 160 68.1
QL11p010746 Quercus lobata HOM05D005256 ORTHO05D006491 6.8e-47 191.4 160 70.6
Dinv07938 Davidia involucrata HOM05D005256 ORTHO05D006491 1.2e-46 190.7 137 75.9
Dinv18415 Davidia involucrata HOM05D005256 ORTHO05D006491 1.2e-46 190.7 137 75.9
Ciclev10016618m.g Citrus clementina HOM05D005256 ORTHO05D006491 1.5e-46 190.3 144 74.3
Potri.001G073900 Populus trichocarpa HOM05D005256 ORTHO05D006491 2.0e-46 189.9 157 68.2
CSS0003949 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 4.4e-46 188.7 134 76.1
TAR624G1249 Trochodendron aralioides HOM05D005256 ORTHO05D006491 9.8e-46 187.6 159 68.6
CSS0021462 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 2.2e-45 186.4 136 75.0
MD10G1224100 Malus domestica HOM05D005256 ORTHO05D006491 2.2e-45 186.4 159 67.9
Prupe.4G121100 Prunus persica HOM05D005256 ORTHO05D006491 2.2e-45 186.4 135 76.3
vmacro03574 Vaccinium macrocarpon HOM05D005256 ORTHO05D006491 2.2e-45 186.4 135 75.6
Rhsim13G0136300 Rhododendron simsii HOM05D005256 ORTHO05D006491 2.9e-45 186.0 145 71.0
EL10Ac7g17298 Beta vulgaris HOM05D005256 ORTHO05D006491 3.7e-45 185.7 162 65.4
Eucgr.D00001 Eucalyptus grandis HOM05D005256 ORTHO05D006491 3.7e-45 185.7 157 67.5
Lsat_1_v5_gn_2_59820 Lactuca sativa HOM05D005256 ORTHO05D006491 4.9e-45 185.3 135 73.3
Oeu005126.1 Olea europaea HOM05D005256 ORTHO05D006491 4.9e-45 185.3 162 64.2
Haze_05185 Corylus avellana HOM05D005256 ORTHO05D006491 1.9e-44 183.3 146 70.5
Peaxi162Scf00888g00114 Petunia axillaris HOM05D005256 ORTHO05D006491 3.2e-44 182.6 134 71.6
Solyc10g005100.3 Solanum lycopersicum HOM05D005256 ORTHO05D006491 4.1e-44 182.2 142 69.0
Hma1.2p1_0082F.1_g042560 Hydrangea macrophylla HOM05D005256 ORTHO05D006491 7.0e-44 181.4 160 66.9
MBI07_g44405_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 7.0e-44 181.4 163 63.8
GSVIVG01001340001 Vitis vinifera HOM05D005256 ORTHO05D006491 7.0e-44 181.4 139 71.9
Sopen10g001120 Solanum pennellii HOM05D005256 ORTHO05D006491 9.2e-44 181.0 171 62.0
PGSC0003DMG400011293 Solanum tuberosum HOM05D005256 ORTHO05D006491 9.2e-44 181.0 160 63.8
MD05G1242300 Malus domestica HOM05D005256 ORTHO05D006491 2.7e-43 179.5 138 72.5
TAR626G1126 Trochodendron aralioides HOM05D005256 ORTHO05D006491 4.6e-43 178.7 131 74.0
CiPaw.09G140800 Carya illinoinensis HOM05D005256 ORTHO05D006491 7.8e-43 177.9 137 69.3
Nitab4.5_0004778g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 1.0e-42 177.6 146 65.1
CAN.G465.5 Capsicum annuum HOM05D005256 ORTHO05D006491 1.7e-42 176.8 174 59.2
Ah.15g091820 Amaranthus hybridus HOM05D005256 ORTHO05D006491 2.3e-42 176.4 153 66.0
AUR62040985 Chenopodium quinoa HOM05D005256 ORTHO05D006491 3.0e-42 176.0 160 65.0
Manes.16G060225 Manihot esculenta HOM05D005256 ORTHO05D006491 3.0e-42 176.0 133 70.7
Oeu052922.1 Olea europaea HOM05D005256 ORTHO05D006491 5.1e-42 175.3 164 60.4
RcHm_v2.0_Chr5g0022081 Rosa chinensis HOM05D005256 ORTHO05D006491 1.9e-41 173.3 157 64.3
Hund20133 Selenicereus undatus HOM05D005256 ORTHO05D006491 4.3e-41 172.2 160 63.1
FAN11G1371 Fragaria x ananassa HOM05D005256 ORTHO05D006491 5.6e-41 171.8 155 63.2
FvH4_3g13370 Fragaria vesca HOM05D005256 ORTHO05D006491 1.2e-40 170.6 152 63.8
HanXRQChr14g0439031 Helianthus annuus HOM05D005256 ORTHO05D006491 1.2e-40 170.6 148 63.5
Cpa.g.sc30.65 Carica papaya HOM05D005256 ORTHO05D006491 1.6e-40 170.2 149 65.1
Lsat_1_v5_gn_8_107621 Lactuca sativa HOM05D005256 ORTHO05D006491 1.6e-40 170.2 131 69.5
FAN21G0853 Fragaria x ananassa HOM05D005256 ORTHO05D006491 2.1e-40 169.9 152 63.8
Sc17g0004300 Simmondsia chinensis HOM05D005256 ORTHO05D006491 3.6e-40 169.1 153 62.7
FAN16G0515 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.1e-39 167.5 139 64.7
FAN25G1093 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.4e-39 167.2 152 62.5
CDE02G1470 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 2.3e-39 166.4 144 65.3
ECA238G2220 Erigeron canadensis HOM05D005256 ORTHO05D006491 4.0e-39 165.6 131 70.2
AT4G20260 Arabidopsis thaliana HOM05D005256 ORTHO05D006491 6.8e-39 164.9 148 61.5
HPP92_008810 Vanilla planifolia HOM05D005256 ORTHO05D006491 6.8e-39 164.9 130 70.0
THA.LOC104812925 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 2.0e-38 163.3 148 62.2
ATR0737G015 Amborella trichopoda HOM05D005256 ORTHO05D006491 2.6e-38 162.9 143 66.4
COL.COLO4_25022 Corchorus olitorius HOM05D005256 ORTHO05D006491 3.4e-38 162.5 133 68.4
MSTRG.14820 Avicennia marina HOM05D005256 ORTHO05D006491 5.8e-38 161.8 138 65.9
CANSAT35G0328 Cannabis sativa HOM05D005256 ORTHO05D006491 7.5e-38 161.4 139 64.0
AL7G33640 Arabidopsis lyrata HOM05D005256 ORTHO05D006491 9.9e-38 161.0 148 60.1
Peaxi162Scf01310g00311 Petunia axillaris HOM05D005256 ORTHO05D006491 1.7e-37 160.2 137 66.4
ECA232G1901 Erigeron canadensis HOM05D005256 ORTHO05D006491 6.4e-37 158.3 131 66.4
SalBow7G1744 Salvia bowleyana HOM05D005256 ORTHO05D006491 6.4e-37 158.3 162 58.0
CARHR227090 Cardamine hirsuta HOM05D005256 ORTHO05D006491 8.3e-37 157.9 148 60.1
HanXRQChr15g0487481 Helianthus annuus HOM05D005256 ORTHO05D006491 1.4e-36 157.1 131 64.1
CDE10G0480 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 2.4e-36 156.4 135 63.7
CiPaw.10G108500 Carya illinoinensis HOM05D005256 ORTHO05D006491 3.2e-36 156.0 137 65.7
FAN25G0981 Fragaria x ananassa HOM05D005256 ORTHO05D006491 3.2e-36 156.0 152 61.2
THA.LOC104811953 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 3.2e-36 156.0 145 59.3
Aa31LG6G2690 Aethionema arabicum HOM05D005256 ORTHO05D006491 5.4e-36 155.2 162 53.1
MBI06_g04184_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 5.4e-36 155.2 148 60.1
Migut.L00006 Erythranthe guttata HOM05D005256 ORTHO05D006491 9.2e-36 154.5 131 64.9
CDE10G1097 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 2.1e-35 153.3 135 63.0
Cc09_g04590 Coffea canephora HOM05D005256 ORTHO05D006491 2.1e-35 153.3 156 55.8
Thecc.02G000700 Theobroma cacao HOM05D005256 ORTHO05D006491 2.7e-35 152.9 126 65.9
PSO675G8904 Papaver somniferum HOM05D005256 ORTHO05D006491 3.5e-35 152.5 155 58.7
BcaC09g51326 Brassica carinata HOM05D005256 ORTHO05D006491 4.6e-35 152.1 148 57.4
C01p14230 Brassica napus HOM05D005256 ORTHO05D006491 4.6e-35 152.1 148 57.4
BolC1t01388H Brassica oleracea HOM05D005256 ORTHO05D006491 4.6e-35 152.1 148 57.4
BraA01t01138Z Brassica rapa HOM05D005256 ORTHO05D006491 4.6e-35 152.1 148 57.4
PSO541G2657 Papaver somniferum HOM05D005256 ORTHO05D006491 7.8e-35 151.4 155 58.1
Thhalv10026094m.g Eutrema salsugineum HOM05D005256 ORTHO05D006491 1.0e-34 151.0 148 56.8
A01p11960 Brassica napus HOM05D005256 ORTHO05D006491 1.3e-34 150.6 148 56.8
BraA03t14315Z Brassica rapa HOM05D005256 ORTHO05D006491 1.3e-34 150.6 148 56.1
BcaC06g30648 Brassica carinata HOM05D005256 ORTHO05D006491 1.7e-34 150.2 148 56.1
C07p50830 Brassica napus HOM05D005256 ORTHO05D006491 6.6e-34 148.3 148 55.4
BolC7t45581H Brassica oleracea HOM05D005256 ORTHO05D006491 6.6e-34 148.3 148 55.4
Carub.0007s2091 Capsella rubella HOM05D005256 ORTHO05D006491 8.6e-34 147.9 138 57.2
Sp7g18620 Schrenkiella parvula HOM05D005256 ORTHO05D006491 1.1e-33 147.5 148 56.1
A03p52380 Brassica napus HOM05D005256 ORTHO05D006491 1.5e-33 147.1 148 54.7
BcaNung03497 Brassica carinata HOM05D005256 ORTHO05D006491 2.5e-33 146.4 148 54.7
AUR62042105 Chenopodium quinoa HOM05D005256 ORTHO05D006491 2.5e-33 146.4 154 61.0
CDE09G1225 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 2.1e-32 143.3 138 60.9
A06p47070 Brassica napus HOM05D005256 ORTHO05D006491 1.8e-31 140.2 168 55.4
BraA06t27579Z Brassica rapa HOM05D005256 ORTHO05D006491 1.8e-31 140.2 168 55.4
HanXRQChr09g0257711 Helianthus annuus HOM05D005256 ORTHO05D006491 1.8e-31 140.2 131 58.8
Nitab4.5_0000217g0040 Nicotiana tabacum HOM05D005256 ORTHO05D006491 1.5e-30 137.1 135 62.2
BcaNung03716 Brassica carinata HOM05D005256 ORTHO05D006491 2.0e-30 136.7 144 56.2
Aa31LG9G8540 Aethionema arabicum HOM05D005256 ORTHO05D006491 1.3e-29 134.0 148 53.4
C07p27480 Brassica napus HOM05D005256 ORTHO05D006491 1.3e-29 134.0 161 54.0
Nitab4.5_0012748g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 2.9e-29 132.9 112 64.3
BcaC06g34533 Brassica carinata HOM05D005256 ORTHO05D006491 3.8e-29 132.5 161 53.4
BcaC04g21824 Brassica carinata HOM05D005256 ORTHO05D006491 6.4e-29 131.7 154 51.9
C09p27010 Brassica napus HOM05D005256 ORTHO05D006491 6.4e-29 131.7 154 51.9
BolC7t43278H Brassica oleracea HOM05D005256 ORTHO05D006491 6.4e-29 131.7 161 53.4
BolC9t55584H Brassica oleracea HOM05D005256 ORTHO05D006491 6.4e-29 131.7 154 51.9
A09p21180 Brassica napus HOM05D005256 ORTHO05D006491 1.1e-28 131.0 154 51.9
BraA09t37724Z Brassica rapa HOM05D005256 ORTHO05D006491 1.1e-28 131.0 154 51.9
DCAR_003732 Daucus carota HOM05D005256 ORTHO05D006491 2.4e-28 129.8 131 57.3
BcaB07g30517 Brassica carinata HOM05D005256 ORTHO05D006491 5.4e-28 128.6 169 51.5
Os02g0285300 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 5.4e-28 128.6 140 55.0
Sp2g09430 Schrenkiella parvula HOM05D005256 ORTHO05D006491 6.0e-27 125.2 140 54.3
Nitab4.5_0001253g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 3.0e-26 122.9 135 57.0
BcaB07g30940 Brassica carinata HOM05D005256 ORTHO05D006491 3.9e-26 122.5 149 50.3
Lalb_Chr20g0114421 Lupinus albus HOM05D005256 ORTHO05D006491 3.1e-23 112.8 93 71.0
Zm00001eb339340 Zea mays HOM05D005256 ORTHO05D006491 5.3e-23 112.1 148 48.0
Zm00001eb236850 Zea mays HOM05D005256 ORTHO05D006491 2.0e-22 110.2 115 58.3
MBI06_g26562_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 4.4e-22 109.0 111 57.7
Zm00001eb119130 Zea mays HOM05D005256 ORTHO05D006491 5.8e-22 108.6 135 50.4
Os01g0233000 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 9.9e-22 107.8 151 48.3
C02p45090 Brassica napus HOM05D005256 ORTHO05D006491 3.8e-21 105.9 169 48.5
BolC2t10548H Brassica oleracea HOM05D005256 ORTHO05D006491 3.8e-21 105.9 169 48.5
Lsat_1_v5_gn_9_9820 Lactuca sativa HOM05D005256 ORTHO05D006491 1.7e-18 97.1 103 57.3
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 1.1e-15 87.8 68 72.1
Zm00001eb381370 Zea mays HOM05D005256 ORTHO05D006491 9.9e-06 54.7 60 53.3


User provided reference genes

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