Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G245000 Phaseolus vulgaris HOM05D012657 ORTHO05D015609 9.7e-80 300.1 149 100.0
VMungo1309G2785 Vigna mungo HOM05D012657 ORTHO05D015609 3.7e-55 218.4 152 79.6
Glyma.15G155200 Glycine max HOM05D012657 ORTHO05D015609 2.6e-48 195.7 155 70.3
Glyma.09G047800 Glycine max HOM05D012657 ORTHO05D015609 2.4e-46 189.1 155 68.4
Psat1g152000 Pisum sativum HOM05D012657 ORTHO05D015609 3.8e-15 85.5 147 44.9
Lalb_Chr20g0114381 Lupinus albus HOM05D012657 ORTHO05D015609 2.7e-13 79.3 163 37.4
Psat1g151800 Pisum sativum HOM05D012657 ORTHO05D015609 6.0e-13 78.2 121 45.5
Ca_02411_v3 Cicer arietinum L. HOM05D012657 ORTHO05D015609 1.0e-12 77.4 144 43.8
TPR.G27546 Trifolium pratense HOM05D012657 ORTHO05D015609 1.3e-12 77.0 110 47.3
Phvul.003G275300 Phaseolus vulgaris HOM05D002102 ORTHO05D004119 1.1e-11 73.9 123 45.5
Glyma.15G155100 Glycine max HOM05D002102 ORTHO05D004119 1.5e-11 73.6 120 42.5
Glyma.16G094200 Glycine max HOM05D002102 ORTHO05D004119 2.5e-11 72.8 117 43.6
Medtr2g437620 Medicago truncatula HOM05D012657 ORTHO05D015609 4.3e-11 72.0 97 45.4
VMungo0251G3352 Vigna mungo HOM05D002102 ORTHO05D004119 9.6e-11 70.9 115 46.1
Manes.16G059800 Manihot esculenta HOM05D002102 ORTHO05D004119 2.1e-10 69.7 119 41.2
Medtr2g437610 Medicago truncatula HOM05D012657 ORTHO05D015609 2.8e-10 69.3 119 46.2
Cpa.g.sc1291.1 Carica papaya HOM05D002102 ORTHO05D004119 1.4e-09 67.0 106 43.4
Lj6g0004188 Lotus japonicus HOM05D012657 ORTHO05D015609 2.4e-09 66.2 146 38.4
Phvul.009G245100 Phaseolus vulgaris HOM05D002102 ORTHO05D004119 5.3e-09 65.1 122 39.3
Potri.001G074300 Populus trichocarpa HOM05D002102 ORTHO05D004119 6.9e-09 64.7 106 37.7
Sabra01G0052600 Salix brachista HOM05D002102 ORTHO05D004119 6.9e-09 64.7 96 38.5
VMungo0251G0427 Vigna mungo HOM05D002102 ORTHO05D029775 6.9e-09 64.7 91 49.5
Phvul.002G272500 Phaseolus vulgaris HOM05D002102 ORTHO05D029775 9.0e-09 64.3 109 44.0
VMungo1309G0754 Vigna mungo HOM05D002102 ORTHO05D004119 9.0e-09 64.3 154 32.5
ECA246G4308 Erigeron canadensis HOM05D002102 ORTHO05D004119 1.2e-08 63.9 92 40.2
Glyma.05G192200 Glycine max HOM05D002102 ORTHO05D029775 1.2e-08 63.9 110 45.5
Glyma.09G047700 Glycine max HOM05D002102 ORTHO05D004119 1.5e-08 63.5 121 38.0
QL11p010813 Quercus lobata HOM05D002102 ORTHO05D004119 1.5e-08 63.5 123 41.5
Medtr8g070690 Medicago truncatula HOM05D002102 ORTHO05D004119 2.0e-08 63.2 117 41.0
Lj6g0016862 Lotus japonicus HOM05D002102 ORTHO05D004119 3.4e-08 62.4 128 35.9
HanXRQChr02g0036451 Helianthus annuus HOM05D002102 ORTHO05D004119 4.5e-08 62.0 92 40.2
Ciclev10015737m.g Citrus clementina HOM05D002102 ORTHO05D004119 5.8e-08 61.6 120 38.3
Thecc.01G106700 Theobroma cacao HOM05D002102 ORTHO05D004119 5.8e-08 61.6 129 36.4
TAR629G0218 Trochodendron aralioides HOM05D002102 ORTHO05D004119 1.7e-07 60.1 128 36.7
COL.COLO4_03689 Corchorus olitorius HOM05D002102 ORTHO05D004119 3.8e-07 58.9 89 39.3
Prupe.4G120700 Prunus persica HOM05D002102 ORTHO05D004119 3.8e-07 58.9 111 35.1
Potri.003G156700 Populus trichocarpa HOM05D002102 ORTHO05D004119 6.4e-07 58.2 103 35.9
Actinidia34699 Actinidia chinensis HOM05D002102 ORTHO05D004119 8.4e-07 57.8 122 32.8
Lalb_Chr05g0229071 Lupinus albus HOM05D002102 ORTHO05D004119 8.4e-07 57.8 109 33.9
Glyma.08G000500 Glycine max HOM05D012657 ORTHO05D029775 1.1e-06 57.4 96 46.9
MD05G1242700 Malus domestica HOM05D002102 ORTHO05D004119 1.1e-06 57.4 83 39.8
TWI63G0772 Tripterygium wilfordii HOM05D002102 ORTHO05D004119 1.1e-06 57.4 115 34.8
Cfa001163 Carpinus fangiana HOM05D002102 ORTHO05D004119 2.4e-06 56.2 120 35.8
CiPaw.09G140500 Carya illinoinensis HOM05D002102 ORTHO05D004119 2.4e-06 56.2 118 33.9
Aa31LG6G2610 Aethionema arabicum HOM05D002102 ORTHO05D004119 3.2e-06 55.8 163 30.1
MD10G1224500 Malus domestica HOM05D002102 ORTHO05D004119 4.2e-06 55.5 89 38.2
TWI15G0700 Tripterygium wilfordii HOM05D002102 ORTHO05D004119 4.2e-06 55.5 120 32.5
Sopen10g001180 Solanum pennellii HOM05D002102 ORTHO05D004119 7.1e-06 54.7 82 34.1
PGSC0003DMG400011261 Solanum tuberosum HOM05D002102 ORTHO05D004119 7.1e-06 54.7 86 38.4
Hma1.2p1_0166F.1_g073520 Hydrangea macrophylla HOM05D002102 ORTHO05D004119 9.3e-06 54.3 117 35.9
MBI02_g17885_MAGBIO Magnolia biondii HOM05D002102 ORTHO05D004119 9.3e-06 54.3 117 36.8
TPR.G19830 Trifolium pratense HOM05D002102 ORTHO05D004119 9.3e-06 54.3 117 37.6


User provided reference genes

Program Settings