Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G242100 Phaseolus vulgaris HOM05D005863 ORTHO05D003355 4.0e-160 568.2 307 100.0
VMungo1309G2065 Vigna mungo HOM05D001598 ORTHO05D002757 1.6e-137 493.0 319 84.3
Glyma.09G051600 Glycine max HOM05D005863 ORTHO05D003355 1.9e-98 363.2 339 65.8
Glyma.15G157900 Glycine max HOM05D005863 ORTHO05D003355 9.6e-82 307.8 316 62.7
Lj6g0020676 Lotus japonicus HOM05D005863 ORTHO05D003355 5.9e-71 271.9 323 57.3
Ca_02000_v3 Cicer arietinum L. HOM05D005863 ORTHO05D003355 3.2e-69 266.2 326 54.0
Medtr2g036070 Medicago truncatula HOM05D005863 ORTHO05D003355 1.9e-66 256.9 330 56.4
Psat1g149600 Pisum sativum HOM05D005863 ORTHO05D003355 6.9e-64 248.4 321 53.0
TPR.G1700 Trifolium pratense HOM05D005863 ORTHO05D003355 6.5e-62 241.9 336 50.0
arahy.Tifrunner.gnm1.ann1.9BU9L2 Arachis hypogaea HOM05D005863 ORTHO05D003355 2.0e-55 220.3 314 48.1
arahy.Tifrunner.gnm1.ann1.11ED70 Arachis hypogaea HOM05D005863 ORTHO05D003355 1.9e-53 213.8 314 46.5
Lalb_Chr18g0052131 Lupinus albus HOM05D005863 ORTHO05D003355 3.3e-42 176.4 316 41.8
QL08p003943 Quercus lobata HOM05D014719 ORTHO05D003355 2.6e-18 97.1 345 28.7
Dinv10342 Davidia involucrata HOM05D005863 ORTHO05D003355 4.6e-15 86.3 315 29.2
Actinidia37152 Actinidia chinensis HOM05D005863 ORTHO05D003355 3.0e-14 83.6 327 28.7
CiPaw.12G138700 Carya illinoinensis HOM05D014719 ORTHO05D003355 1.5e-13 81.3 338 27.2
CANSAT78G1634 Cannabis sativa HOM05D005863 ORTHO05D003355 7.3e-13 79.0 320 26.9
Eucgr.F03684 Eucalyptus grandis HOM05D005863 ORTHO05D003355 4.7e-12 76.3 252 30.2
Rhsim04G0012300 Rhododendron simsii HOM05D005863 ORTHO05D003355 1.4e-11 74.7 271 28.0
Nn1g07525 Nelumbo nucifera HOM05D005863 ORTHO05D003355 2.3e-11 73.9 262 29.4
Ciclev10008896m.g Citrus clementina HOM05D005863 ORTHO05D003355 3.1e-11 73.6 308 25.0
GSVIVG01014696001 Vitis vinifera HOM05D005863 ORTHO05D003355 3.1e-11 73.6 341 25.8
Cpa.g.sc12.119 Carica papaya HOM05D005863 ORTHO05D003355 6.8e-11 72.4 255 30.2
Thecc.07G012300 Theobroma cacao HOM05D005863 ORTHO05D003355 1.2e-10 71.6 308 26.6
TAR629G0397 Trochodendron aralioides HOM05D005863 ORTHO05D003355 6.4e-09 65.9 354 23.4
Haze_09834 Corylus avellana HOM05D014719 ORTHO05D003355 1.9e-08 64.3 243 25.1
Prupe.8G267500 Prunus persica HOM05D014719 ORTHO05D003355 1.9e-08 64.3 236 28.8
vmacro09646 Vaccinium macrocarpon HOM05D005863 ORTHO05D003355 4.1e-08 63.2 355 25.1
Hma1.2p1_2829F.1_g329210 Hydrangea macrophylla HOM05D005863 ORTHO05D003355 5.4e-08 62.8 343 24.2
Nitab4.5_0006876g0020 Nicotiana tabacum HOM05D005863 ORTHO05D003355 1.6e-07 61.2 266 25.9
Rhsim10G0199200 Rhododendron simsii HOM05D005863 ORTHO05D003355 6.0e-07 59.3 84 41.7
Rhsim10G0199400 Rhododendron simsii HOM05D005863 ORTHO05D003355 3.0e-06 57.0 114 35.1
Manes.02G222900 Manihot esculenta HOM05D005863 ORTHO05D003355 5.0e-06 56.2 267 27.0
Atru.chr2.3697 Acer truncatum HOM05D005863 ORTHO05D003355 6.6e-06 55.8 37 67.6


User provided reference genes

Program Settings