Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G240200 Phaseolus vulgaris HOM05D005558 ORTHO05D006832 1.0e-105 386.7 189 100.0
Glyma.15G161100 Glycine max HOM05D005558 ORTHO05D006832 2.2e-68 262.7 143 87.4
Lalb_Chr15g0083971 Lupinus albus HOM05D005558 ORTHO05D006832 1.1e-62 243.8 144 79.2
arahy.Tifrunner.gnm1.ann1.8D2970 Arachis hypogaea HOM05D005558 ORTHO05D006832 3.0e-57 225.7 144 75.0
arahy.Tifrunner.gnm1.ann1.GVHP98 Arachis hypogaea HOM05D005558 ORTHO05D006832 3.0e-57 225.7 144 75.0
Cfa014170 Carpinus fangiana HOM05D005558 ORTHO05D006832 2.5e-56 222.6 148 75.0
PGR083G0867 Punica granatum HOM05D005558 ORTHO05D006832 1.2e-55 220.3 149 73.2
TPR.G20977 Trifolium pratense HOM05D005558 ORTHO05D006832 2.8e-55 219.2 143 76.2
Ca_18758_v3 Cicer arietinum L. HOM05D005558 ORTHO05D006832 6.2e-55 218.0 143 75.5
Medtr4g084120 Medicago truncatula HOM05D005558 ORTHO05D006832 1.4e-54 216.9 143 75.5
Psat7g129880 Pisum sativum HOM05D005558 ORTHO05D006832 1.4e-54 216.9 143 75.5
CiPaw.08G079200 Carya illinoinensis HOM05D005558 ORTHO05D006832 5.2e-54 214.9 146 74.0
Lj4g0004166 Lotus japonicus HOM05D005558 ORTHO05D006832 5.2e-54 214.9 143 73.4
QL02p016334 Quercus lobata HOM05D005558 ORTHO05D006832 5.2e-54 214.9 154 70.8
arahy.Tifrunner.gnm1.ann1.09GV4T Arachis hypogaea HOM05D005558 ORTHO05D006832 6.8e-54 214.5 143 76.2
arahy.Tifrunner.gnm1.ann1.H4MLSW Arachis hypogaea HOM05D005558 ORTHO05D006832 6.8e-54 214.5 143 76.2
PSO017G1036 Papaver somniferum HOM05D005558 ORTHO05D006832 8.9e-54 214.2 148 71.6
Nitab4.5_0003423g0040 Nicotiana tabacum HOM05D005558 ORTHO05D006832 3.4e-53 212.2 141 73.0
PSO170G6225 Papaver somniferum HOM05D005558 ORTHO05D006832 3.4e-53 212.2 148 71.6
TAR381G1539 Trochodendron aralioides HOM05D005558 ORTHO05D006832 4.4e-53 211.8 131 77.1
Nn6g31548 Nelumbo nucifera HOM05D005558 ORTHO05D006832 1.3e-52 210.3 147 71.4
CSS0024776 Camellia sinensis var. sinensis HOM05D005558 ORTHO05D006832 2.2e-52 209.5 148 68.9
Hma1.2p1_0914F.1_g236230 Hydrangea macrophylla HOM05D005558 ORTHO05D006832 4.9e-52 208.4 152 67.1
Prupe.5G000800 Prunus persica HOM05D005558 ORTHO05D006832 4.9e-52 208.4 147 73.5
Dinv05517 Davidia involucrata HOM05D005558 ORTHO05D006832 1.9e-51 206.5 151 68.9
AL1G34110 Arabidopsis lyrata HOM05D005558 ORTHO05D006832 2.4e-51 206.1 145 69.7
Glyma.07G221200 Glycine max HOM05D005558 ORTHO05D006832 2.4e-51 206.1 143 72.0
VMungo0251G0776 Vigna mungo HOM05D005558 ORTHO05D006832 2.4e-51 206.1 158 67.1
Sopen12g031670 Solanum pennellii HOM05D005558 ORTHO05D006832 3.2e-51 205.7 132 72.7
CAN.G208.43 Capsicum annuum HOM05D005558 ORTHO05D006832 4.1e-51 205.3 132 72.7
CiPaw.07G129900 Carya illinoinensis HOM05D005558 ORTHO05D006832 4.1e-51 205.3 151 68.9
MD06G1057400 Malus domestica HOM05D005558 ORTHO05D006832 4.1e-51 205.3 145 71.0
Gorai.009G185800 Gossypium raimondii HOM05D005558 ORTHO05D006832 7.1e-51 204.5 141 72.3
Solyc12g095770.2 Solanum lycopersicum HOM05D005558 ORTHO05D006832 7.1e-51 204.5 132 72.7
Manes.18G000600 Manihot esculenta HOM05D005558 ORTHO05D006832 9.2e-51 204.1 151 64.9
Gohir.A05G177400 Gossypium hirsutum HOM05D005558 ORTHO05D006832 1.2e-50 203.8 144 71.5
Carub.0001s2052 Capsella rubella HOM05D005558 ORTHO05D006832 1.6e-50 203.4 145 68.3
Lsat_1_v5_gn_2_2740 Lactuca sativa HOM05D005558 ORTHO05D006832 2.1e-50 203.0 136 72.1
Phvul.002G097800 Phaseolus vulgaris HOM05D005558 ORTHO05D006832 2.1e-50 203.0 143 70.6
ClCG11G019260 Citrullus lanatus HOM05D005558 ORTHO05D006832 2.7e-50 202.6 144 66.7
Gohir.D05G180800 Gossypium hirsutum HOM05D005558 ORTHO05D006832 2.7e-50 202.6 144 69.4
RcHm_v2.0_Chr7g0217691 Rosa chinensis HOM05D005558 ORTHO05D006832 2.7e-50 202.6 136 69.9
Atru.chr13.17 Acer truncatum HOM05D005558 ORTHO05D006832 3.5e-50 202.2 147 69.4
Rhsim06G0000500 Rhododendron simsii HOM05D005558 ORTHO05D006832 6.0e-50 201.4 107 84.1
TWI12G1391 Tripterygium wilfordii HOM05D005558 ORTHO05D006832 7.8e-50 201.1 131 71.0
COL.COLO4_12262 Corchorus olitorius HOM05D005558 ORTHO05D006832 1.0e-49 200.7 147 70.1
HanXRQChr14g0427511 Helianthus annuus HOM05D005558 ORTHO05D006832 1.0e-49 200.7 128 75.8
Cc10_g00070 Coffea canephora HOM05D005558 ORTHO05D006832 1.3e-49 200.3 107 82.2
Sc17g0004140 Simmondsia chinensis HOM05D005558 ORTHO05D006832 1.3e-49 200.3 131 73.3
CARHR021510 Cardamine hirsuta HOM05D005558 ORTHO05D006832 1.7e-49 199.9 147 66.7
Sed0017561 Sechium edule HOM05D005558 ORTHO05D006832 1.7e-49 199.9 147 66.0
Sabra02G0001000 Salix brachista HOM05D005558 ORTHO05D006832 2.3e-49 199.5 130 71.5
CANSAT25G0089 Cannabis sativa HOM05D005558 ORTHO05D006832 3.0e-49 199.1 144 68.1
MD07G1016000 Malus domestica HOM05D005558 ORTHO05D006832 3.9e-49 198.7 112 83.0
PGSC0003DMG400029397 Solanum tuberosum HOM05D005558 ORTHO05D006832 3.9e-49 198.7 109 80.7
EL10Ac7g17248 Beta vulgaris HOM05D005558 ORTHO05D006832 5.1e-49 198.4 129 72.9
Potri.002G001500 Populus trichocarpa HOM05D005558 ORTHO05D006832 5.1e-49 198.4 130 71.5
GSVIVG01013466001 Vitis vinifera HOM05D005558 ORTHO05D006832 5.1e-49 198.4 112 79.5
Hund05339 Selenicereus undatus HOM05D005558 ORTHO05D006832 6.6e-49 198.0 130 71.5
MSTRG.24533 Avicennia marina HOM05D005558 ORTHO05D006832 8.6e-49 197.6 107 80.4
Ciclev10002303m.g Citrus clementina HOM05D005558 ORTHO05D006832 8.6e-49 197.6 140 70.0
Lalb_Chr05g0219661 Lupinus albus HOM05D005558 ORTHO05D006832 8.6e-49 197.6 110 81.8
CsaV3_4G037850 Cucumis sativus L. HOM05D005558 ORTHO05D006832 1.1e-48 197.2 147 65.3
Actinidia15539 Actinidia chinensis HOM05D005558 ORTHO05D006832 1.5e-48 196.8 108 82.4
Aqoxy5G00965 Aquilegia oxysepala HOM05D005558 ORTHO05D006832 3.3e-48 195.7 110 80.9
BcaB03g12837 Brassica carinata HOM05D005558 ORTHO05D006832 3.3e-48 195.7 148 66.2
Peaxi162Scf00064g01430 Petunia axillaris HOM05D005558 ORTHO05D006832 4.3e-48 195.3 144 64.6
THA.LOC104813721 Tarenaya hassleriana HOM05D005558 ORTHO05D006832 5.6e-48 194.9 154 64.9
Thecc.08G097300 Theobroma cacao HOM05D005558 ORTHO05D006832 9.5e-48 194.1 135 70.4
AUR62041000 Chenopodium quinoa HOM05D005558 ORTHO05D006832 1.2e-47 193.7 129 69.8
HPP92_021698 Vanilla planifolia HOM05D005558 ORTHO05D006832 1.2e-47 193.7 107 82.2
AT1G21065 Arabidopsis thaliana HOM05D005558 ORTHO05D006832 2.1e-47 193.0 142 66.2
Sp1g18730 Schrenkiella parvula HOM05D005558 ORTHO05D006832 2.1e-47 193.0 149 66.4
HPP92_017798 Vanilla planifolia HOM05D005558 ORTHO05D006832 6.2e-47 191.4 133 67.7
FAN04G1408 Fragaria x ananassa HOM05D005558 ORTHO05D006832 8.1e-47 191.0 131 69.5
BraA06t24816Z Brassica rapa HOM05D005558 ORTHO05D006832 1.1e-46 190.7 108 77.8
Duzib116G0928 Durio zibethinus HOM05D005558 ORTHO05D006832 1.1e-46 190.7 135 71.1
ATR0605G185 Amborella trichopoda HOM05D005558 ORTHO05D006832 1.4e-46 190.3 132 67.4
BcaB07g32099 Brassica carinata HOM05D005558 ORTHO05D006832 1.4e-46 190.3 145 65.5
A06p17130 Brassica napus HOM05D005558 ORTHO05D006832 1.4e-46 190.3 106 79.2
Migut.N03003 Erythranthe guttata HOM05D005558 ORTHO05D006832 1.4e-46 190.3 115 72.2
Thhalv10008709m.g Eutrema salsugineum HOM05D005558 ORTHO05D006832 1.4e-46 190.3 148 66.2
BcaC05g26014 Brassica carinata HOM05D005558 ORTHO05D006832 2.4e-46 189.5 146 66.4
BcaC07g39074 Brassica carinata HOM05D005558 ORTHO05D006832 3.1e-46 189.1 122 73.0
Ah.08g212310 Amaranthus hybridus HOM05D005558 ORTHO05D006832 4.0e-46 188.7 129 68.2
FvH4_5g26780 Fragaria vesca HOM05D005558 ORTHO05D006832 5.2e-46 188.3 147 63.3
FAN18G4437 Fragaria x ananassa HOM05D005558 ORTHO05D006832 5.2e-46 188.3 147 63.3
FAN08G1374 Fragaria x ananassa HOM05D005558 ORTHO05D006832 6.8e-46 188.0 131 69.5
A08p29100 Brassica napus HOM05D005558 ORTHO05D006832 8.9e-46 187.6 122 72.1
C08p20580 Brassica napus HOM05D005558 ORTHO05D006832 8.9e-46 187.6 122 72.1
BolC8t49687H Brassica oleracea HOM05D005558 ORTHO05D006832 8.9e-46 187.6 122 72.1
BraA08t34846Z Brassica rapa HOM05D005558 ORTHO05D006832 8.9e-46 187.6 122 72.1
Os02g0187500 Oryza sativa ssp. japonica HOM05D005558 ORTHO05D006832 2.0e-45 186.4 107 79.4
SGA_v2.0_scaffold19G08925 Striga asiatica HOM05D005558 ORTHO05D006832 3.4e-45 185.7 115 74.8
Eucgr.F01955 Eucalyptus grandis HOM05D005558 ORTHO05D006832 5.8e-45 184.9 146 63.7
Zm00001eb387340 Zea mays HOM05D005558 ORTHO05D006832 9.9e-45 184.1 117 69.2
Zm00001eb234660 Zea mays HOM05D005558 ORTHO05D006832 1.9e-43 179.9 107 73.8
Mapoly0002s0034 Marchantia polymorpha HOM05D005558 ORTHO05D006832 1.2e-42 177.2 107 74.8
SEGI_40156 Sequoiadendron giganteum HOM05D005558 ORTHO05D006832 1.6e-42 176.8 109 73.4
SGA_v2.0_scaffold25G11031 Striga asiatica HOM05D005558 ORTHO05D006832 4.6e-42 175.3 115 72.2
SMO259G0018 Selaginella moellendorffii HOM05D005558 ORTHO05D006832 1.3e-41 173.7 107 70.1
Pp3c1_31360 Physcomitrium patens HOM05D005558 ORTHO05D006832 3.0e-41 172.6 107 71.0
vmacro21735 Vaccinium macrocarpon HOM05D005558 ORTHO05D006832 3.3e-40 169.1 230 47.0
TAR376G0283 Trochodendron aralioides HOM05D005558 ORTHO05D006832 6.2e-39 164.9 94 80.9
Oeu000735.2 Olea europaea HOM05D005558 ORTHO05D006832 1.8e-38 163.3 91 78.0
Nitab4.5_0001309g0160 Nicotiana tabacum HOM05D005558 ORTHO05D006832 2.4e-38 162.9 91 81.3
ECA238G0376 Erigeron canadensis HOM05D005558 ORTHO05D006832 3.4e-37 159.1 89 80.9
Cre17.g739300 Chlamydomonas reinhardtii HOM05D005558 ORTHO05D006832 1.4e-35 153.7 105 67.6
MELO3C017079.2 Cucumis melo HOM05D005558 ORTHO05D006832 7.1e-35 151.4 82 82.9
Prupe.5G000700 Prunus persica HOM05D005558 ORTHO05D006832 9.3e-35 151.0 83 84.3
Lj4C814G4 Lonicera japonica HOM05D005558 ORTHO05D006832 2.3e-33 146.4 106 65.1
BolC5t30678H Brassica oleracea HOM05D000370 ORTHO05D006832 4.3e-32 142.1 101 65.3
CBR_g570 Chara braunii HOM05D005558 ORTHO05D006832 2.6e-29 132.9 85 68.2
AL8G17720 Arabidopsis lyrata HOM05D005558 ORTHO05D006832 1.2e-26 124.0 72 79.2
SMO203G0115 Selaginella moellendorffii HOM05D005558 ORTHO05D006832 6.7e-25 118.2 105 55.2
SEGI_39286 Sequoiadendron giganteum HOM05D005558 ORTHO05D006832 6.7e-25 118.2 116 52.6
Pp3c2_25680 Physcomitrium patens HOM05D005558 ORTHO05D006832 1.1e-24 117.5 104 55.8
Os06g0638200 Oryza sativa ssp. japonica HOM05D005558 ORTHO05D006832 2.5e-24 116.3 61 85.2
AL5G16180 Arabidopsis lyrata HOM05D005558 ORTHO05D006832 5.6e-24 115.2 70 77.1
Cre01.g043100 Chlamydomonas reinhardtii HOM05D005558 ORTHO05D006832 1.3e-23 114.0 143 46.2
Mapoly0065s0101 Marchantia polymorpha HOM05D005558 ORTHO05D006832 4.8e-23 112.1 109 52.3
Peaxi162Scf00064g01422 Petunia axillaris HOM05D005558 ORTHO05D006832 4.0e-22 109.0 90 60.0
Haze_22894 Corylus avellana HOM05D005558 ORTHO05D006832 9.0e-22 107.8 148 43.9
Cfa023908 Carpinus fangiana HOM05D005558 ORTHO05D006832 3.2e-19 99.4 114 42.1
CDE04G3086 Ceratophyllum demersum HOM05D000433 ORTHO05D000443 6.7e-17 91.7 147 38.8
AagrBONN_evm.TU.Sc2ySwM_344.2923 Anthoceros agrestis HOM05D005558 ORTHO05D006832 7.4e-16 88.2 89 52.8
MCO09G054 Micromonas commoda HOM05D005558 ORTHO05D006832 1.8e-14 83.6 101 46.5
HPP92_021704 Vanilla planifolia HOM05D005558 ORTHO05D006832 2.4e-14 83.2 107 43.9
SalBow6G6347 Salvia bowleyana HOM05D005558 ORTHO05D006832 3.9e-09 65.9 115 37.4
Cpa.g.sc36.93 Carica papaya HOM05D005558 ORTHO05D006832 8.7e-09 64.7 31 87.1
DCAR_022964 Daucus carota HOM05D005558 ORTHO05D006832 1.9e-08 63.5 72 47.2
Cpa.g.sc36.94 Carica papaya HOM05D005558 ORTHO05D006832 4.3e-08 62.4 120 40.8
Aa31LG7G5210 Aethionema arabicum HOM05D005558 ORTHO05D006832 2.4e-06 56.6 60 51.7


User provided reference genes

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