Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G238800 Phaseolus vulgaris HOM05D007765 ORTHO05D009826 6.7e-105 384.0 195 100.0
VMungo1309G2639 Vigna mungo HOM05D007765 ORTHO05D009826 7.2e-83 310.8 198 86.9
Glyma.15G162800 Glycine max HOM05D007765 ORTHO05D009826 1.6e-66 256.5 198 76.8
Glyma.09G056600 Glycine max HOM05D007765 ORTHO05D009826 8.0e-66 254.2 215 71.6
Lj4g0004123 Lotus japonicus HOM05D007765 ORTHO05D009826 1.5e-48 196.8 208 59.1
Phvul.003G143700 Phaseolus vulgaris HOM05D007765 ORTHO05D009826 4.6e-45 185.3 208 58.2
Glyma.17G061700 Glycine max HOM05D007765 ORTHO05D009826 2.8e-42 176.0 203 55.2
Lalb_Chr20g0116301 Lupinus albus HOM05D007765 ORTHO05D009826 1.4e-41 173.7 213 51.6
Lalb_Chr18g0052451 Lupinus albus HOM05D007765 ORTHO05D009826 1.2e-40 170.6 202 52.0
Medtr2g036670 Medicago truncatula HOM05D007765 ORTHO05D009826 3.4e-40 169.1 193 56.0
TPR.G9240 Trifolium pratense HOM05D007765 ORTHO05D009826 4.4e-40 168.7 197 55.3
Glyma.13G098000 Glycine max HOM05D007765 ORTHO05D009826 6.4e-39 164.9 205 51.7
Lj6g0023329 Lotus japonicus HOM05D007765 ORTHO05D009826 1.3e-36 157.1 189 53.4
Lalb_Chr12g0199471 Lupinus albus HOM05D007765 ORTHO05D009826 1.3e-36 157.1 200 48.5
TPR.G5381 Trifolium pratense HOM05D007765 ORTHO05D009826 9.6e-35 151.0 194 47.9
Ca_21240_v3 Cicer arietinum L. HOM05D007139 ORTHO05D009171 4.0e-33 145.6 189 49.7
arahy.Tifrunner.gnm1.ann1.8SXC5S Arachis hypogaea HOM05D007765 ORTHO05D009826 5.2e-33 145.2 194 49.0
arahy.Tifrunner.gnm1.ann1.YM1G3Q Arachis hypogaea HOM05D007765 ORTHO05D009826 3.5e-29 132.5 192 47.9
Medtr4g127700 Medicago truncatula HOM05D007765 ORTHO05D009826 6.0e-29 131.7 184 42.9
VMungo1215G1692 Vigna mungo HOM05D007765 ORTHO05D009826 3.3e-27 125.9 169 51.5
QL11p005142 Quercus lobata HOM05D007765 ORTHO05D009826 4.3e-27 125.6 213 42.3
Atru.chr7.847 Acer truncatum HOM05D007765 ORTHO05D009826 2.8e-26 122.9 215 38.1
Dinv41219 Davidia involucrata HOM05D007765 ORTHO05D009826 4.5e-24 115.5 213 40.4
Duzib150G0923 Durio zibethinus HOM05D007765 ORTHO05D009826 5.8e-24 115.2 223 39.9
TAR383G0713 Trochodendron aralioides HOM05D007765 ORTHO05D009826 2.9e-23 112.8 225 37.3
Psat1g146600 Pisum sativum HOM05D007765 ORTHO05D009826 6.4e-23 111.7 97 62.9
COL.COLO4_36375 Corchorus olitorius HOM05D007765 ORTHO05D009826 4.2e-22 109.0 197 39.6
Sabra18G0077700 Salix brachista HOM05D007765 ORTHO05D009826 7.1e-22 108.2 208 38.0
Potri.018G090200 Populus trichocarpa HOM05D007765 ORTHO05D009826 1.3e-20 104.0 212 36.8
Thhalv10026906m.g Eutrema salsugineum HOM05D007765 ORTHO05D009826 2.3e-20 103.2 186 36.0
Carub.0007s1043 Capsella rubella HOM05D007765 ORTHO05D009826 3.9e-20 102.4 186 35.5
MBI14_g08141_MAGBIO Magnolia biondii HOM05D007765 ORTHO05D009826 8.7e-20 101.3 224 35.7
RcHm_v2.0_Chr4g0400891 Rosa chinensis HOM05D007765 ORTHO05D009826 8.7e-20 101.3 201 39.3
CiPaw.07G194200 Carya illinoinensis HOM05D007765 ORTHO05D009826 1.5e-19 100.5 223 36.3
CARHR238080 Cardamine hirsuta HOM05D007765 ORTHO05D009826 3.3e-19 99.4 186 34.9
AT2G18969 Arabidopsis thaliana HOM05D007765 ORTHO05D009826 9.6e-19 97.8 190 37.4
Gohir.A13G212300 Gossypium hirsutum HOM05D007765 ORTHO05D009826 3.7e-18 95.9 195 36.9
FAN22G0698 Fragaria x ananassa HOM05D007765 ORTHO05D009826 4.8e-18 95.5 209 34.4
THA.LOC104803946 Tarenaya hassleriana HOM05D007765 ORTHO05D009826 8.1e-18 94.7 208 35.1
AL3G52940 Arabidopsis lyrata HOM05D007765 ORTHO05D009826 1.1e-17 94.4 194 37.1
Gohir.D13G216400 Gossypium hirsutum HOM05D007765 ORTHO05D009826 1.1e-17 94.4 195 36.9
Gorai.013G246700 Gossypium raimondii HOM05D007765 ORTHO05D009826 1.4e-17 94.0 195 36.9
THA.LOC104819971 Tarenaya hassleriana HOM05D007765 ORTHO05D009826 1.4e-17 94.0 198 35.9
BcaNung04419 Brassica carinata HOM05D007765 ORTHO05D009826 1.8e-17 93.6 187 33.2
Carub.0003s3320 Capsella rubella HOM05D007765 ORTHO05D009826 3.1e-17 92.8 190 35.8
FAN12G2617 Fragaria x ananassa HOM05D007765 ORTHO05D009826 9.0e-17 91.3 206 34.5
FvH4_4g07800 Fragaria vesca HOM05D007765 ORTHO05D009826 1.2e-16 90.9 206 34.5
FAN07G1496 Fragaria x ananassa HOM05D007765 ORTHO05D009826 1.5e-16 90.5 209 33.5
AL7G22010 Arabidopsis lyrata HOM05D007765 ORTHO05D009826 2.0e-16 90.1 186 34.4
Dinv19560 Davidia involucrata HOM05D007765 ORTHO05D009826 2.6e-16 89.7 214 34.6
Sp3g32420 Schrenkiella parvula HOM05D007765 ORTHO05D009826 2.6e-16 89.7 190 35.8
FAN17G2229 Fragaria x ananassa HOM05D007765 ORTHO05D009826 5.8e-16 88.6 210 32.9
Thhalv10022885m.g Eutrema salsugineum HOM05D007765 ORTHO05D009826 2.2e-15 86.7 192 35.4
Sp7g28050 Schrenkiella parvula HOM05D007765 ORTHO05D009826 2.9e-15 86.3 187 31.6
AT4G30180 Arabidopsis thaliana HOM05D007765 ORTHO05D009826 6.4e-15 85.1 186 32.3
BcaB03g12635 Brassica carinata HOM05D007765 ORTHO05D009826 6.4e-15 85.1 191 33.0
BolC9t54340H Brassica oleracea HOM05D007765 ORTHO05D009826 6.4e-15 85.1 190 33.2
CARHR109510 Cardamine hirsuta HOM05D007765 ORTHO05D009826 6.4e-15 85.1 188 37.2
BcaB07g31628 Brassica carinata HOM05D007765 ORTHO05D009826 1.1e-14 84.3 190 35.3
MBI16_g38085_MAGBIO Magnolia biondii HOM05D007765 ORTHO05D009826 1.1e-14 84.3 199 33.2
BcaC04g22872 Brassica carinata HOM05D007765 ORTHO05D009826 1.4e-14 84.0 190 33.2
BcaC09g51800 Brassica carinata HOM05D007765 ORTHO05D009826 1.4e-14 84.0 187 31.6
A01p07960 Brassica napus HOM05D007765 ORTHO05D009826 1.4e-14 84.0 187 31.6
A09p12150 Brassica napus HOM05D007765 ORTHO05D009826 1.4e-14 84.0 190 32.6
C01p08880 Brassica napus HOM05D007765 ORTHO05D009826 1.4e-14 84.0 187 31.6
C09p14370 Brassica napus HOM05D007765 ORTHO05D009826 1.4e-14 84.0 190 32.6
BolC1t00878H Brassica oleracea HOM05D007765 ORTHO05D009826 1.4e-14 84.0 187 31.6
BraA09t36859Z Brassica rapa HOM05D007765 ORTHO05D009826 1.4e-14 84.0 190 32.6
BraA01t00741Z Brassica rapa HOM05D007765 ORTHO05D009826 2.4e-14 83.2 187 31.0
ClCG11G011990 Citrullus lanatus HOM05D007765 ORTHO05D009826 1.2e-13 80.9 193 32.1
CsaV3_2G008530 Cucumis sativus L. HOM05D007765 ORTHO05D009826 8.7e-12 74.7 197 29.9
Prupe.1G081900 Prunus persica HOM05D007765 ORTHO05D009826 1.9e-11 73.6 200 34.0
C03p88840 Brassica napus HOM05D007765 ORTHO05D009826 5.6e-11 72.0 190 30.0
BolC3t21196H Brassica oleracea HOM05D007765 ORTHO05D009826 5.6e-11 72.0 190 30.0
THA.LOC104803486 Tarenaya hassleriana HOM05D007765 ORTHO05D009826 7.4e-11 71.6 198 33.3
CANSAT11G2643 Cannabis sativa HOM05D007765 ORTHO05D009826 9.6e-11 71.2 212 33.5
Sed0013776 Sechium edule HOM05D007765 ORTHO05D009826 9.6e-11 71.2 197 29.9
A08p19380 Brassica napus HOM05D007765 ORTHO05D009826 1.3e-10 70.9 190 29.5
BraA08t33899Z Brassica rapa HOM05D007765 ORTHO05D009826 1.3e-10 70.9 190 29.5
PSO170G3972 Papaver somniferum HOM05D007765 ORTHO05D009826 8.2e-10 68.2 230 28.7
Medtr2g083470 Medicago truncatula HOM05D007765 ORTHO05D009826 9.0e-09 64.7 65 55.4
PSO063G6075 Papaver somniferum HOM05D007765 ORTHO05D009826 4.5e-08 62.4 226 29.6
BcaC04g20459 Brassica carinata HOM05D007765 ORTHO05D009826 7.1e-06 55.1 72 41.7


User provided reference genes

Program Settings