Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G235500 Phaseolus vulgaris HOM05D007474 ORTHO05D009367 6.0e-130 467.6 252 100.0
VMungo1309G2929 Vigna mungo HOM05D007474 ORTHO05D009367 4.3e-120 434.9 250 94.0
Glyma.09G060400 Glycine max HOM05D007474 ORTHO05D009367 4.0e-110 401.7 249 86.7
Lalb_Chr23g0276761 Lupinus albus HOM05D007474 ORTHO05D009367 2.9e-100 369.0 250 78.0
Lj6g0008723 Lotus japonicus HOM05D007474 ORTHO05D009367 3.0e-97 359.0 249 76.7
Psat1g143800 Pisum sativum HOM05D007474 ORTHO05D009367 3.0e-97 359.0 250 75.2
Medtr2g038090 Medicago truncatula HOM05D007474 ORTHO05D009367 3.7e-95 352.1 250 74.8
TPR.G7578 Trifolium pratense HOM05D007474 ORTHO05D009367 2.4e-94 349.4 248 74.2
arahy.Tifrunner.gnm1.ann1.0S7KVV Arachis hypogaea HOM05D007474 ORTHO05D009367 3.2e-83 312.4 249 67.9
arahy.Tifrunner.gnm1.ann1.FGVY1L Arachis hypogaea HOM05D007474 ORTHO05D009367 9.3e-83 310.8 249 67.9
Manes.02G078300 Manihot esculenta HOM05D007474 ORTHO05D009367 1.6e-74 283.5 250 62.4
Haze_22034 Corylus avellana HOM05D007474 ORTHO05D009367 5.7e-72 275.0 249 60.6
Haze_22037 Corylus avellana HOM05D007474 ORTHO05D009367 5.7e-72 275.0 249 60.6
Dinv41187 Davidia involucrata HOM05D007474 ORTHO05D009367 3.7e-71 272.3 243 60.5
Atru.chr7.945_Atru.chr7.946 Acer truncatum HOM05D007474 ORTHO05D009367 1.5e-69 266.9 249 60.6
RcHm_v2.0_Chr4g0399191 Rosa chinensis HOM05D007474 ORTHO05D009367 5.9e-69 265.0 250 57.6
GSVIVG01029310001 Vitis vinifera HOM05D007474 ORTHO05D009367 7.7e-69 264.6 250 58.4
Prupe.1G073900 Prunus persica HOM05D007474 ORTHO05D009367 1.7e-68 263.5 250 57.6
TAR625G0702 Trochodendron aralioides HOM05D007474 ORTHO05D009367 2.9e-68 262.7 250 59.2
Cfa013460 Carpinus fangiana HOM05D007474 ORTHO05D009367 3.8e-68 262.3 249 59.0
Nn8g40674 Nelumbo nucifera HOM05D007474 ORTHO05D009367 3.2e-67 259.2 250 55.2
FAN17G0817 Fragaria x ananassa HOM05D007474 ORTHO05D009367 4.2e-67 258.8 250 56.8
Rhsim01G0114800 Rhododendron simsii HOM05D007474 ORTHO05D009367 9.4e-67 257.7 252 56.7
Actinidia02497 Actinidia chinensis HOM05D007474 ORTHO05D009367 4.7e-66 255.4 250 56.8
CiPaw.07G198000 Carya illinoinensis HOM05D007474 ORTHO05D009367 1.0e-65 254.2 249 57.4
Ciclev10010167m.g Citrus clementina HOM05D007474 ORTHO05D009367 1.0e-65 254.2 251 58.6
Rhsim01G0114300 Rhododendron simsii HOM05D007474 ORTHO05D009367 1.0e-65 254.2 252 56.0
Thecc.09G187600 Theobroma cacao HOM05D007474 ORTHO05D009367 1.8e-65 253.4 250 57.2
FvH4_4g07070 Fragaria vesca HOM05D007474 ORTHO05D009367 6.7e-65 251.5 250 56.8
THA.LOC104813505 Tarenaya hassleriana HOM05D007474 ORTHO05D009367 9.7e-64 247.7 247 54.7
FAN22G0500 Fragaria x ananassa HOM05D007474 ORTHO05D009367 3.7e-63 245.7 252 55.2
Duzib170G0522 Durio zibethinus HOM05D007474 ORTHO05D009367 1.1e-62 244.2 249 57.8
FAN07G0784 Fragaria x ananassa HOM05D007474 ORTHO05D009367 1.8e-62 243.4 257 55.3
TWI63G0256 Tripterygium wilfordii HOM05D007474 ORTHO05D009367 1.5e-61 240.4 250 54.8
Lsat_1_v5_gn_7_55841 Lactuca sativa HOM05D007474 ORTHO05D009367 2.6e-61 239.6 247 55.1
HanXRQChr03g0065461 Helianthus annuus HOM05D007474 ORTHO05D009367 3.5e-61 239.2 250 53.2
FAN12G4033 Fragaria x ananassa HOM05D007474 ORTHO05D009367 1.7e-60 236.9 255 54.5
Gohir.A02G011900 Gossypium hirsutum HOM05D007474 ORTHO05D009367 2.2e-60 236.5 253 55.7
Carub.0007s1493 Capsella rubella HOM05D007474 ORTHO05D009367 3.8e-60 235.7 247 52.2
Aqoxy7G02873 Aquilegia oxysepala HOM05D007474 ORTHO05D009367 5.0e-60 235.3 274 51.5
AT4G26020 Arabidopsis thaliana HOM05D007474 ORTHO05D009367 8.5e-60 234.6 247 52.2
A03p56400 Brassica napus HOM05D007474 ORTHO05D009367 1.9e-59 233.4 247 53.0
Thhalv10027087m.g Eutrema salsugineum HOM05D007474 ORTHO05D009367 2.5e-59 233.0 247 51.8
C07p54630 Brassica napus HOM05D007474 ORTHO05D009367 3.2e-59 232.6 247 52.6
CANSAT56G2223 Cannabis sativa HOM05D007474 ORTHO05D009367 2.7e-58 229.6 248 51.2
MD16G1247400 Malus domestica HOM05D007474 ORTHO05D009367 2.7e-58 229.6 230 53.5
Sp7g24050 Schrenkiella parvula HOM05D007474 ORTHO05D009367 4.7e-58 228.8 247 51.0
PSO063G0774 Papaver somniferum HOM05D007474 ORTHO05D009367 1.0e-57 227.6 245 52.7
Peaxi162Scf00231g01013 Petunia axillaris HOM05D007474 ORTHO05D009367 1.4e-57 227.3 244 51.2
AL7G26960 Arabidopsis lyrata HOM05D007474 ORTHO05D009367 6.7e-57 224.9 247 51.4
CARHR233540 Cardamine hirsuta HOM05D007474 ORTHO05D009367 2.6e-56 223.0 247 49.8
PSO170G3200 Papaver somniferum HOM05D007474 ORTHO05D009367 2.6e-56 223.0 295 45.8
ECA240G4744 Erigeron canadensis HOM05D007474 ORTHO05D009367 4.4e-56 222.2 243 50.6
BolC7t45951H Brassica oleracea HOM05D007474 ORTHO05D009367 7.4e-56 221.5 265 49.1
Nitab4.5_0011174g0010 Nicotiana tabacum HOM05D007474 ORTHO05D009367 9.7e-56 221.1 249 50.2
Gohir.D02G012700 Gossypium hirsutum HOM05D007474 ORTHO05D009367 2.2e-55 219.9 248 53.6
Hma1.2p1_0235F.1_g098730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 2.8e-55 219.5 214 55.1
CAN.G107.39 Capsicum annuum HOM05D007474 ORTHO05D009367 8.2e-55 218.0 240 49.6
Sabra18G0115300 Salix brachista HOM05D007474 ORTHO05D009367 4.1e-54 215.7 194 59.8
Gorai.005G016200 Gossypium raimondii HOM05D007474 ORTHO05D009367 1.2e-53 214.2 253 52.6
QL04p010614 Quercus lobata HOM05D007474 ORTHO05D009367 2.6e-53 213.0 251 53.4
Aa31LG3G380 Aethionema arabicum HOM05D007474 ORTHO05D009367 5.9e-53 211.8 248 48.8
Cpa.g.sc95.3 Carica papaya HOM05D007474 ORTHO05D009367 1.0e-52 211.1 249 50.6
Cc06_g17460 Coffea canephora HOM05D007474 ORTHO05D009367 2.9e-52 209.5 240 50.0
BcaC06g32774 Brassica carinata HOM05D007474 ORTHO05D009367 3.8e-52 209.1 247 49.8
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 2.2e-47 193.4 231 48.5
PGR142G1289 Punica granatum HOM05D007474 ORTHO05D009367 4.8e-47 192.2 257 45.1
Sc11g0007970 Simmondsia chinensis HOM05D007474 ORTHO05D009367 8.3e-47 191.4 249 47.4
Zm00001eb232320 Zea mays HOM05D007474 ORTHO05D009367 1.1e-46 191.0 246 43.1
EL10Ac2g04755 Beta vulgaris HOM05D007474 ORTHO05D009367 3.8e-44 182.6 244 45.5
AUR62012086 Chenopodium quinoa HOM05D007474 ORTHO05D009367 3.8e-44 182.6 249 45.0
AUR62039378 Chenopodium quinoa HOM05D007474 ORTHO05D009367 6.5e-44 181.8 249 45.4
COL.COLO4_06926 Corchorus olitorius HOM05D007474 ORTHO05D009367 2.5e-43 179.9 200 53.0
Os02g0148600 Oryza sativa ssp. japonica HOM05D007474 ORTHO05D009367 3.6e-42 176.0 246 43.1
BraA03t14710Z Brassica rapa HOM05D007474 ORTHO05D009367 4.7e-42 175.6 267 41.9
Nitab4.5_0000056g0090 Nicotiana tabacum HOM05D007474 ORTHO05D009367 1.8e-41 173.7 276 41.3
PGR142G0563 Punica granatum HOM05D007474 ORTHO05D009367 2.3e-41 173.3 263 43.0
MBI16_g28190_MAGBIO Magnolia biondii HOM05D007474 ORTHO05D009367 7.5e-40 168.3 202 49.0
Oeu044666.1 Olea europaea HOM05D007474 ORTHO05D009367 2.2e-39 166.8 199 48.2
AUR62039384 Chenopodium quinoa HOM05D007474 ORTHO05D009367 1.4e-38 164.1 235 43.4
Ah.09g225720 Amaranthus hybridus HOM05D007474 ORTHO05D009367 7.7e-37 158.3 249 41.8
Ca_02115_v3 Cicer arietinum L. HOM05D007474 ORTHO05D009367 3.8e-36 156.0 126 64.3
Potri.018G141166 Populus trichocarpa HOM05D007474 ORTHO05D009367 3.8e-36 156.0 143 62.2
vmacro20808 Vaccinium macrocarpon HOM05D007474 ORTHO05D009367 5.2e-33 145.6 145 55.2
CSS0031812 Camellia sinensis var. sinensis HOM05D007474 ORTHO05D009367 1.5e-32 144.1 164 51.2
Eucgr.C00103 Eucalyptus grandis HOM05D007474 ORTHO05D009367 2.0e-32 143.7 143 53.8
Hma1.2p1_0140F.1_g063730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 3.5e-29 132.9 116 58.6
Potri.018G141232 Populus trichocarpa HOM05D007474 ORTHO05D009367 5.6e-27 125.6 126 53.2
PGR142G3816 Punica granatum HOM05D007474 ORTHO05D009367 8.0e-26 121.7 120 54.2
AUR62004543 Chenopodium quinoa HOM05D007474 ORTHO05D009367 6.6e-20 102.1 169 40.2
Hund13756 Selenicereus undatus HOM05D007474 ORTHO05D009367 6.2e-18 95.5 126 46.8
Lj4A313T24 Lonicera japonica HOM05D007474 ORTHO05D009367 1.8e-17 94.0 80 60.0
Actinidia07550 Actinidia chinensis HOM05D007474 ORTHO05D009367 8.9e-17 91.7 78 59.0
SMO364G0168 Selaginella moellendorffii HOM05D007474 ORTHO05D009367 6.4e-15 85.5 246 28.0
arahy.Tifrunner.gnm1.ann1.245C1J Arachis hypogaea HOM05D007474 ORTHO05D009367 8.3e-15 85.1 65 67.7
QL04p011351 Quercus lobata HOM05D000009 ORTHO05D000008 3.5e-13 79.7 97 50.5
arahy.Tifrunner.gnm1.ann1.TVY351 Arachis hypogaea HOM05D007474 ORTHO05D009367 4.6e-13 79.3 61 67.2
Lju170C0T1 Lonicera japonica HOM05D007424 ORTHO05D009367 3.9e-12 76.3 85 50.6
TWI63G1298 Tripterygium wilfordii HOM05D007474 ORTHO05D009367 3.9e-12 76.3 108 43.5
vmacro20809 Vaccinium macrocarpon HOM05D007474 ORTHO05D009367 3.9e-12 76.3 55 70.9
Mapoly0011s0196 Marchantia polymorpha HOM05D007474 ORTHO05D009367 3.1e-09 66.6 263 24.7
arahy.Tifrunner.gnm1.ann1.J5XFRX Arachis hypogaea HOM05D011742 ORTHO05D014450 1.3e-07 61.2 55 58.2
Actinidia07549 Actinidia chinensis HOM05D007474 ORTHO05D009367 1.7e-07 60.8 47 63.8


User provided reference genes

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