Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 7.3e-229 797.0 429 100.0
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 4.8e-164 581.6 428 76.4
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 4.8e-164 581.6 429 77.4
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 2.4e-147 526.2 358 83.2
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 3.9e-113 412.5 423 57.7
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 1.6e-111 407.1 545 47.7
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 2.6e-109 399.8 568 47.2
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 1.3e-108 397.5 549 47.0
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 6.9e-102 375.2 487 50.9
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 2.6e-101 373.2 481 51.1
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 7.4e-80 302.0 431 45.9
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 2.3e-65 253.8 201 68.7
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 5.7e-48 196.1 327 41.9
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 2.2e-47 194.1 421 38.0
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 3.5e-45 186.8 332 42.2
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 2.5e-43 180.6 433 36.5
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 4.2e-43 179.9 368 39.7
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 1.4e-41 174.9 387 38.2
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 2.3e-41 174.1 360 38.9
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 8.3e-39 165.6 414 36.0
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 1.1e-38 165.2 352 37.2
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 1.4e-38 164.9 433 36.0
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.4e-38 164.1 425 33.9
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 5.4e-38 162.9 367 37.3
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 5.9e-37 159.5 425 33.2
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 2.2e-36 157.5 425 32.9
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 5.0e-36 156.4 394 34.5
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 6.5e-36 156.0 359 36.5
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 1.5e-35 154.8 378 34.9
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 4.2e-35 153.3 362 35.9
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 5.5e-35 152.9 346 37.0
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.6e-34 151.4 358 35.5
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 2.1e-34 151.0 395 32.4
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 3.6e-34 150.2 395 34.4
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.0e-33 148.7 354 35.0
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.0e-33 148.7 352 35.8
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 1.4e-33 148.3 231 43.3
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 1.4e-33 148.3 355 35.8
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 2.3e-33 147.5 429 34.0
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 3.0e-33 147.1 371 34.2
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 4.4e-32 143.3 376 35.6
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 9.8e-32 142.1 380 33.9
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 9.8e-32 142.1 497 29.4
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 2.8e-31 140.6 479 29.2
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 2.8e-31 140.6 499 30.5
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 4.9e-31 139.8 449 32.7
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 8.3e-31 139.0 413 32.9
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 8.3e-31 139.0 377 32.1
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 2.4e-30 137.5 214 40.2
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 1.6e-29 134.8 353 36.3
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 1.6e-29 134.8 403 32.3
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 5.9e-29 132.9 398 33.2
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 1.0e-28 132.1 400 31.0
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 3.8e-28 130.2 367 31.6
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 5.0e-28 129.8 188 42.6
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 1.1e-27 128.6 359 32.6
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.9e-27 127.9 349 33.8
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 4.2e-27 126.7 481 29.5
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 5.5e-27 126.3 387 32.0
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 1.2e-26 125.2 360 33.3
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 1.2e-26 125.2 572 26.4
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 2.1e-26 124.4 489 28.2
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 2.8e-26 124.0 200 42.0
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 4.7e-26 123.2 122 52.5
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 4.7e-26 123.2 400 29.5
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 1.0e-25 122.1 358 32.7
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 1.8e-25 121.3 481 28.9
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 3.0e-25 120.6 121 52.1
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 3.0e-25 120.6 135 45.9
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 4.0e-25 120.2 379 31.4
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 5.2e-25 119.8 121 52.9
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 1.2e-24 118.6 495 27.7
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 3.4e-24 117.1 135 47.4
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 4.4e-24 116.7 362 31.5
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 7.5e-24 115.9 115 48.7
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 2.4e-22 110.9 250 35.2
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 2.4e-22 110.9 418 30.4
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 1.2e-21 108.6 368 31.8
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 1.6e-21 108.2 504 27.4
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 1.6e-21 108.2 411 31.1
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 1.7e-20 104.8 387 28.2
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 2.3e-20 104.4 308 32.1
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 5.0e-20 103.2 385 29.4
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 2.8e-18 97.4 210 33.3
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 8.0e-18 95.9 256 31.2
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 1.8e-17 94.7 403 29.5
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 5.2e-17 93.2 418 26.1
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 1.2e-16 92.0 380 27.9
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 3.4e-16 90.5 463 24.8
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 1.7e-15 88.2 430 26.3
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 7.0e-14 82.8 409 27.1
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 7.0e-14 82.8 143 35.0
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 4.6e-13 80.1 125 36.0
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 4.6e-13 80.1 178 30.9
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 1.0e-12 79.0 445 27.0
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 3.0e-12 77.4 143 35.7
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 3.0e-12 77.4 143 35.7
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 4.3e-11 73.6 133 39.1
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 9.5e-11 72.4 307 27.4
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 1.6e-10 71.6 265 28.7
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 2.8e-10 70.9 335 28.1
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 1.4e-09 68.6 454 26.9
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 3.1e-09 67.4 67 50.7
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 5.2e-09 66.6 127 31.5
Lalb_Chr08g0232031 Lupinus albus HOM05D006771 ORTHO05D008296 1.2e-08 65.5 66 56.1
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 2.2e-07 61.2 53 56.6
Lalb_Chr08g0232041 Lupinus albus HOM05D006771 ORTHO05D008296 2.4e-06 57.8 100 45.0
SEGI_24756 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 4.1e-06 57.0 131 32.1
CBR_g20330 Chara braunii HOM05D006771 ORTHO05D008296 5.4e-06 56.6 113 32.7
Lj4A308T27 Lonicera japonica HOM05D006771 ORTHO05D008296 7.1e-06 56.2 58 46.6


User provided reference genes

Program Settings