Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G224300 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 2.2e-105 385.6 188 100.0
VMungo1309G2633 Vigna mungo HOM05D005897 ORTHO05D007128 8.8e-78 293.9 189 78.3
Glyma.09G073050 Glycine max HOM05D005897 ORTHO05D007128 7.3e-56 221.1 200 62.5
Glyma.15G181800 Glycine max HOM05D005897 ORTHO05D007128 4.4e-53 211.8 185 63.2
Psat1g137480 Pisum sativum HOM05D005897 ORTHO05D007128 7.5e-45 184.5 178 57.3
Ca_05224_v3 Cicer arietinum L. HOM05D005897 ORTHO05D007128 1.1e-43 180.6 190 55.3
Lj6g0011186 Lotus japonicus HOM05D005897 ORTHO05D007128 4.1e-43 178.7 173 57.8
TPR.G4016 Trifolium pratense HOM05D005897 ORTHO05D007128 4.0e-38 162.2 175 52.0
Medtr2g043710 Medicago truncatula HOM05D005897 ORTHO05D007128 1.2e-37 160.6 190 48.9
Glyma.13G113000 Glycine max HOM05D005897 ORTHO05D007128 1.6e-31 140.2 163 49.7
Manes.16G091700 Manihot esculenta HOM05D005897 ORTHO05D007128 1.1e-30 137.5 200 43.5
TWI34G1248 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 4.4e-29 132.1 192 43.2
Lalb_Chr11g0074041 Lupinus albus HOM05D005897 ORTHO05D007128 5.8e-29 131.7 173 48.6
VMungo1215G2819 Vigna mungo HOM05D005897 ORTHO05D007128 1.9e-27 126.7 174 45.4
arahy.Tifrunner.gnm1.ann1.K6A74J Arachis hypogaea HOM05D005897 ORTHO05D007128 5.4e-27 125.2 161 47.2
Phvul.003G128400 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 7.1e-27 124.8 178 44.9
Haze_26054 Corylus avellana HOM05D005897 ORTHO05D007128 3.5e-26 122.5 200 43.5
Glyma.17G046700 Glycine max HOM05D005897 ORTHO05D007128 3.5e-26 122.5 165 45.5
Gohir.D05G036900 Gossypium hirsutum HOM05D005897 ORTHO05D007128 7.8e-26 121.3 184 42.4
Gorai.009G037400 Gossypium raimondii HOM05D005897 ORTHO05D007128 1.7e-25 120.2 184 42.4
Nitab4.5_0008755g0010 Nicotiana tabacum HOM05D005897 ORTHO05D007128 1.7e-25 120.2 168 41.7
CiPaw.03G202200 Carya illinoinensis HOM05D005897 ORTHO05D007128 2.3e-25 119.8 191 42.4
TWI32G0373 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 2.3e-25 119.8 181 40.3
Gohir.D06G078500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 6.6e-25 118.2 184 42.4
Gorai.010G091500 Gossypium raimondii HOM05D005897 ORTHO05D007128 8.6e-25 117.9 184 42.4
COL.COLO4_21221 Corchorus olitorius HOM05D005897 ORTHO05D007128 4.3e-24 115.5 195 39.5
Gohir.A05G035400 Gossypium hirsutum HOM05D005897 ORTHO05D007128 4.3e-24 115.5 186 40.9
Thecc.09G071600 Theobroma cacao HOM05D005897 ORTHO05D007128 7.3e-24 114.8 195 40.0
Gohir.A06G079100 Gossypium hirsutum HOM05D005897 ORTHO05D007128 2.1e-23 113.2 185 40.0
BcaC04g19466 Brassica carinata HOM05D005897 ORTHO05D007128 2.8e-23 112.8 189 39.7
Rhsim03G0226100 Rhododendron simsii HOM05D005897 ORTHO05D007128 2.8e-23 112.8 163 44.2
C09p55420 Brassica napus HOM05D005897 ORTHO05D007128 3.6e-23 112.5 189 39.2
BolC9t58404H Brassica oleracea HOM05D005897 ORTHO05D007128 3.6e-23 112.5 189 39.2
Lj4g0017959 Lotus japonicus HOM05D005897 ORTHO05D007128 3.6e-23 112.5 186 44.1
AT3G43110 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 6.2e-23 111.7 183 41.5
A10p19270 Brassica napus HOM05D005897 ORTHO05D007128 6.2e-23 111.7 190 40.0
AL5G21230 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 8.1e-23 111.3 183 40.4
Duzib150G1683 Durio zibethinus HOM05D005897 ORTHO05D007128 1.4e-22 110.5 193 40.4
Cpa.g.sc1772.1 Carica papaya HOM05D005897 ORTHO05D007128 1.8e-22 110.2 193 41.5
RcHm_v2.0_Chr2g0095761 Rosa chinensis HOM05D005897 ORTHO05D007128 1.8e-22 110.2 182 41.2
Aa31LG4G13050 Aethionema arabicum HOM05D005897 ORTHO05D007128 2.4e-22 109.8 179 40.2
BraA10t44004Z Brassica rapa HOM05D005897 ORTHO05D007128 4.0e-22 109.0 185 40.5
Thhalv10014753m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 4.0e-22 109.0 194 38.1
BcaB01g04771 Brassica carinata HOM05D005897 ORTHO05D007128 5.2e-22 108.6 182 41.2
Medtr4g124850 Medicago truncatula HOM05D005897 ORTHO05D007128 5.2e-22 108.6 188 42.6
CiPaw.04G140700 Carya illinoinensis HOM05D005897 ORTHO05D007128 9.0e-22 107.8 194 41.2
Dinv42424 Davidia involucrata HOM05D005897 ORTHO05D007128 9.0e-22 107.8 185 39.5
Lalb_Chr23g0276271 Lupinus albus HOM05D005897 ORTHO05D007128 9.0e-22 107.8 181 42.0
A02p06480 Brassica napus HOM05D005897 ORTHO05D007128 1.2e-21 107.5 183 40.4
BraA02t05593Z Brassica rapa HOM05D005897 ORTHO05D007128 1.2e-21 107.5 183 40.4
TAR624G1366 Trochodendron aralioides HOM05D005897 ORTHO05D007128 1.2e-21 107.5 189 39.7
BcaC03g13798 Brassica carinata HOM05D005897 ORTHO05D007128 1.5e-21 107.1 187 40.6
BolC2t07071H Brassica oleracea HOM05D005897 ORTHO05D007128 1.5e-21 107.1 187 40.6
Cfa002951 Carpinus fangiana HOM05D005897 ORTHO05D007128 1.5e-21 107.1 204 40.2
Duzib168G1262 Durio zibethinus HOM05D005897 ORTHO05D007128 2.0e-21 106.7 193 40.9
BraA03t10334Z Brassica rapa HOM05D005897 ORTHO05D007128 2.6e-21 106.3 187 39.0
CSS0017580 Camellia sinensis var. sinensis HOM05D005897 ORTHO05D007128 2.6e-21 106.3 172 41.3
BcaB05g22814 Brassica carinata HOM05D005897 ORTHO05D007128 3.4e-21 105.9 188 42.0
BcaB08g36527 Brassica carinata HOM05D005897 ORTHO05D007128 3.4e-21 105.9 184 37.5
CARHR152530 Cardamine hirsuta HOM05D005897 ORTHO05D007128 3.4e-21 105.9 178 39.3
Sp5g18750 Schrenkiella parvula HOM05D005897 ORTHO05D007128 3.4e-21 105.9 182 40.1
A03p10250 Brassica napus HOM05D005897 ORTHO05D007128 5.8e-21 105.1 187 39.0
PGR044G2287 Punica granatum HOM05D005897 ORTHO05D007128 5.8e-21 105.1 198 39.4
QL11p002200 Quercus lobata HOM05D005897 ORTHO05D007128 1.3e-20 104.0 215 38.1
Prupe.7G193600 Prunus persica HOM05D005897 ORTHO05D007128 2.2e-20 103.2 191 42.4
Oeu055332.1 Olea europaea HOM05D005897 ORTHO05D007128 3.8e-20 102.4 192 37.0
Sp6g23730 Schrenkiella parvula HOM05D005897 ORTHO05D007128 6.4e-20 101.7 194 36.6
Thhalv10002680m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 8.4e-20 101.3 184 38.0
CANSAT56G4244 Cannabis sativa HOM05D005897 ORTHO05D007128 1.1e-19 100.9 178 42.7
Carub.0005s0898 Capsella rubella HOM05D005897 ORTHO05D007128 1.1e-19 100.9 184 37.0
C03p11770 Brassica napus HOM05D005897 ORTHO05D007128 1.4e-19 100.5 186 38.2
BolC3t13648H Brassica oleracea HOM05D005897 ORTHO05D007128 1.4e-19 100.5 186 38.2
Nitab4.5_0001699g0070 Nicotiana tabacum HOM05D005897 ORTHO05D007128 1.4e-19 100.5 181 35.4
Sabra06G0107900 Salix brachista HOM05D005897 ORTHO05D007128 2.4e-19 99.8 201 37.3
MSTRG.19434 Avicennia marina HOM05D005897 ORTHO05D007128 4.2e-19 99.0 184 38.0
FAN26G0251 Fragaria x ananassa HOM05D005897 ORTHO05D007128 4.2e-19 99.0 194 37.6
FAN28G0476 Fragaria x ananassa HOM05D005897 ORTHO05D007128 4.2e-19 99.0 195 39.0
Psat4g067280 Pisum sativum HOM05D005897 ORTHO05D007128 4.2e-19 99.0 184 41.8
AL6G32310 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 5.4e-19 98.6 217 34.1
Gorai.001G017300 Gossypium raimondii HOM05D005897 ORTHO05D007128 5.4e-19 98.6 187 40.1
Gohir.D07G016500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 7.1e-19 98.2 187 40.1
MD15G1222300 Malus domestica HOM05D005897 ORTHO05D007128 7.1e-19 98.2 206 37.9
FAN23G1701 Fragaria x ananassa HOM05D005897 ORTHO05D007128 9.3e-19 97.8 194 38.1
Gohir.A07G016700 Gossypium hirsutum HOM05D005897 ORTHO05D007128 1.2e-18 97.4 187 39.6
AT5G20790 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 1.6e-18 97.1 194 36.6
Carub.0006s1909 Capsella rubella HOM05D005897 ORTHO05D007128 1.6e-18 97.1 203 36.0
Oeu010835.1 Olea europaea HOM05D005897 ORTHO05D007128 3.5e-18 95.9 199 35.7
Sopen07g022000 Solanum pennellii HOM05D000392 ORTHO05D002065 1.7e-17 93.6 185 38.4
Actinidia39626 Actinidia chinensis HOM05D005897 ORTHO05D007128 2.3e-17 93.2 172 35.5
FvH4_1g09230 Fragaria vesca HOM05D005897 ORTHO05D007128 2.3e-17 93.2 194 38.1
FAN19G1802 Fragaria x ananassa HOM05D005897 ORTHO05D007128 2.3e-17 93.2 194 38.1
FAN26G0677 Fragaria x ananassa HOM05D005897 ORTHO05D007128 3.0e-17 92.8 195 39.5
Manes.03G043500 Manihot esculenta HOM05D005897 ORTHO05D007128 5.1e-17 92.0 195 35.9
Oeu055333.1 Olea europaea HOM05D005897 ORTHO05D007128 1.5e-16 90.5 185 37.8
Ciclev10009511m.g Citrus clementina HOM05D005897 ORTHO05D007128 2.5e-16 89.7 184 37.0
SalBow6G0024 Salvia bowleyana HOM05D005897 ORTHO05D007128 3.3e-16 89.4 179 36.3
Nitab4.5_0000400g0090 Nicotiana tabacum HOM05D005897 ORTHO05D007128 5.6e-16 88.6 217 30.4
Ciclev10024151m.g Citrus clementina HOM05D005897 ORTHO05D007128 9.6e-16 87.8 180 37.2
Nitab4.5_0001092g0030 Nicotiana tabacum HOM05D005897 ORTHO05D007128 9.6e-16 87.8 211 30.3
TPR.G11456 Trifolium pratense HOM05D005897 ORTHO05D007128 9.6e-16 87.8 178 40.4
SGA_v2.0_scaffold21G09544 Striga asiatica HOM05D005897 ORTHO05D007128 3.6e-15 85.9 185 36.2
Peaxi162Scf00191g00103 Petunia axillaris HOM05D005897 ORTHO05D007128 4.8e-15 85.5 191 33.0
Atru.chr7.1754 Acer truncatum HOM05D005897 ORTHO05D007128 6.2e-15 85.1 199 33.2
MD02G1099300 Malus domestica HOM05D005897 ORTHO05D007128 1.8e-14 83.6 201 36.3
PGR142G3671 Punica granatum HOM05D005897 ORTHO05D007128 6.9e-14 81.6 195 31.3
CARHR192060 Cardamine hirsuta HOM05D005897 ORTHO05D007128 5.8e-13 78.6 193 36.3
Rhsim05G0003600 Rhododendron simsii HOM05D005897 ORTHO05D007128 7.6e-13 78.2 174 34.5
THA.LOC104799609 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 7.6e-13 78.2 210 33.8
Nn6g35653 Nelumbo nucifera HOM05D005897 ORTHO05D007128 1.7e-12 77.0 211 31.8
THA.LOC104811289 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 1.7e-12 77.0 188 33.5
Migut.J00894 Erythranthe guttata HOM05D005897 ORTHO05D007128 2.9e-12 76.3 180 34.4
Potri.006G137700 Populus trichocarpa HOM05D005897 ORTHO05D007128 2.9e-12 76.3 196 31.6
unitig_22.g5071 Utricularia gibba HOM05D005897 ORTHO05D007128 2.9e-12 76.3 182 36.8
Rhsim03G0226200 Rhododendron simsii HOM05D005897 ORTHO05D007128 1.1e-11 74.3 107 46.7
Nn8g38553 Nelumbo nucifera HOM05D005897 ORTHO05D007128 1.4e-11 73.9 208 32.2
TAR383G0419 Trochodendron aralioides HOM05D005897 ORTHO05D007128 1.9e-11 73.6 191 31.9
Migut.L01590 Erythranthe guttata HOM05D005897 ORTHO05D007128 3.2e-11 72.8 175 34.3
Lsat_1_v5_gn_5_139320 Lactuca sativa HOM05D005897 ORTHO05D007128 4.2e-11 72.4 198 30.3
Eucgr.C03289 Eucalyptus grandis HOM05D005897 ORTHO05D007128 2.7e-10 69.7 193 33.2
Actinidia29946 Actinidia chinensis HOM05D005897 ORTHO05D007128 2.3e-09 66.6 188 31.9
Dinv25518 Davidia involucrata HOM05D005897 ORTHO05D007128 2.3e-09 66.6 82 43.9
PGSC0003DMG400013552 Solanum tuberosum HOM05D005897 ORTHO05D007128 1.9e-08 63.5 183 31.1
AUR62028279 Chenopodium quinoa HOM05D005897 ORTHO05D007128 7.4e-08 61.6 179 33.0
vmacro15871 Vaccinium macrocarpon HOM05D000200 ORTHO05D000262 1.4e-06 57.4 43 62.8
PSO448G0001 Papaver somniferum HOM05D005897 ORTHO05D007128 4.0e-06 55.8 199 30.7


User provided reference genes

Program Settings