Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G219800 Phaseolus vulgaris HOM05D006846 ORTHO05D008473 1.4e-81 306.2 153 100.0
VMungo1309G3101 Vigna mungo HOM05D006846 ORTHO05D008473 1.7e-74 282.7 153 92.2
Glyma.15G188800 Glycine max HOM05D006846 ORTHO05D008473 3.0e-68 261.9 153 87.6
Lj6g0016026 Lotus japonicus HOM05D006846 ORTHO05D008473 2.7e-61 238.8 153 79.7
Medtr2g046100 Medicago truncatula HOM05D006846 ORTHO05D008473 3.5e-56 221.9 153 75.8
Psat1g017720 Pisum sativum HOM05D006846 ORTHO05D008473 3.2e-54 215.3 153 71.9
Ca_02363_v3 Cicer arietinum L. HOM05D006846 ORTHO05D008473 3.0e-52 208.8 153 73.2
Lalb_Chr07g0181811 Lupinus albus HOM05D006846 ORTHO05D008473 3.1e-49 198.7 143 71.3
arahy.Tifrunner.gnm1.ann1.BIT0EB Arachis hypogaea HOM05D006846 ORTHO05D008473 7.7e-48 194.1 141 68.8
Prupe.1G108100 Prunus persica HOM05D006846 ORTHO05D008473 1.9e-46 189.5 155 59.4
QL06p041421 Quercus lobata HOM05D006846 ORTHO05D008473 1.9e-46 189.5 122 73.8
Migut.H02019 Erythranthe guttata HOM05D006846 ORTHO05D008473 9.4e-46 187.2 136 64.0
MD13G1143600 Malus domestica HOM05D006846 ORTHO05D008473 2.7e-45 185.7 155 60.6
GSVIVG01017604001 Vitis vinifera HOM05D006846 ORTHO05D008473 4.0e-44 181.8 120 72.5
GSVIVG01017661001 Vitis vinifera HOM05D006846 ORTHO05D008473 4.0e-44 181.8 120 72.5
Thecc.04G310600 Theobroma cacao HOM05D006846 ORTHO05D008473 8.8e-44 180.6 127 67.7
Eucgr.H04110 Eucalyptus grandis HOM05D006846 ORTHO05D008473 2.6e-43 179.1 152 61.8
FAN07G1325 Fragaria x ananassa HOM05D006846 ORTHO05D008473 2.6e-43 179.1 150 61.3
Duzib212G0339 Durio zibethinus HOM05D006846 ORTHO05D008473 3.4e-43 178.7 117 71.8
Gohir.D09G242700 Gossypium hirsutum HOM05D006846 ORTHO05D008473 3.4e-43 178.7 125 71.2
Gorai.006G266400 Gossypium raimondii HOM05D006846 ORTHO05D008473 3.4e-43 178.7 125 71.2
FvH4_4g21260 Fragaria vesca HOM05D006846 ORTHO05D008473 7.5e-43 177.6 150 60.7
SGA_v2.0_scaffold127G34033 Striga asiatica HOM05D006846 ORTHO05D008473 1.3e-42 176.8 137 64.2
Rhsim04G0247300 Rhododendron simsii HOM05D006846 ORTHO05D008473 1.7e-42 176.4 175 52.6
MELO3C003207.2 Cucumis melo HOM05D006846 ORTHO05D008473 2.2e-42 176.0 122 68.9
Hma1.2p1_0013F.1_g007970 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 2.2e-42 176.0 115 73.0
Manes.03G210800 Manihot esculenta HOM05D006846 ORTHO05D008473 2.2e-42 176.0 120 71.7
PGR004G1594 Punica granatum HOM05D006846 ORTHO05D008473 3.7e-42 175.3 140 60.0
PGR033G0007 Punica granatum HOM05D006846 ORTHO05D008473 3.7e-42 175.3 140 60.0
MSTRG.14213 Avicennia marina HOM05D006846 ORTHO05D008473 4.9e-42 174.9 147 59.2
CiPaw.01G161800 Carya illinoinensis HOM05D006846 ORTHO05D008473 4.9e-42 174.9 121 68.6
RcHm_v2.0_Chr4g0426881 Rosa chinensis HOM05D006846 ORTHO05D008473 4.9e-42 174.9 151 60.3
A06p04640 Brassica napus HOM05D006846 ORTHO05D008473 1.4e-41 173.3 117 68.4
BraA06t23668Z Brassica rapa HOM05D006846 ORTHO05D008473 1.4e-41 173.3 117 68.4
TPR.G27493 Trifolium pratense HOM05D006846 ORTHO05D008473 1.4e-41 173.3 127 67.7
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 1.8e-41 172.9 118 70.3
BolC6t35393H Brassica oleracea HOM05D006846 ORTHO05D008473 2.4e-41 172.6 117 70.1
ECA233G5003 Erigeron canadensis HOM05D006846 ORTHO05D008473 2.4e-41 172.6 114 72.8
Sc23g0000700 Simmondsia chinensis HOM05D006846 ORTHO05D008473 2.4e-41 172.6 132 62.1
CsaV3_4G025810 Cucumis sativus L. HOM05D006846 ORTHO05D008473 3.1e-41 172.2 147 59.2
BcaC08g43012 Brassica carinata HOM05D006846 ORTHO05D008473 4.1e-41 171.8 117 70.1
C06p02670 Brassica napus HOM05D006846 ORTHO05D008473 4.1e-41 171.8 117 70.1
Thhalv10012405m.g Eutrema salsugineum HOM05D006846 ORTHO05D008473 4.1e-41 171.8 138 59.4
Sed0003831 Sechium edule HOM05D006846 ORTHO05D008473 4.1e-41 171.8 145 60.7
Lj6A699T67 Lonicera japonica HOM05D006846 ORTHO05D008473 5.4e-41 171.4 143 58.7
Hund16859 Selenicereus undatus HOM05D006846 ORTHO05D008473 5.4e-41 171.4 115 72.2
AUR62019042 Chenopodium quinoa HOM05D006846 ORTHO05D008473 1.2e-40 170.2 115 69.6
AT1G48170 Arabidopsis thaliana HOM05D006846 ORTHO05D008473 1.6e-40 169.9 139 59.0
Nitab4.5_0007474g0050 Nicotiana tabacum HOM05D006846 ORTHO05D008473 1.6e-40 169.9 120 68.3
Sp3g23740 Schrenkiella parvula HOM05D006846 ORTHO05D008473 2.0e-40 169.5 114 69.3
Os12g0182800 Oryza sativa ssp. japonica HOM05D006846 ORTHO05D008473 2.7e-40 169.1 121 66.9
BcaB07g33786 Brassica carinata HOM05D006846 ORTHO05D008473 3.5e-40 168.7 112 71.4
AUR62027881 Chenopodium quinoa HOM05D006846 ORTHO05D008473 3.5e-40 168.7 115 70.4
Aa31LG10G5560 Aethionema arabicum HOM05D006846 ORTHO05D008473 4.5e-40 168.3 117 70.1
AL1G54740 Arabidopsis lyrata HOM05D006846 ORTHO05D008473 4.5e-40 168.3 115 69.6
SGA_v2.0_scaffold127G34034 Striga asiatica HOM05D006846 ORTHO05D008473 4.5e-40 168.3 152 59.2
Cfa015953 Carpinus fangiana HOM05D006846 ORTHO05D008473 5.9e-40 167.9 129 65.1
Peaxi162Scf00579g00010 Petunia axillaris HOM05D006846 ORTHO05D008473 7.7e-40 167.5 128 62.5
SEGI_09291 Sequoiadendron giganteum HOM05D006846 ORTHO05D008473 7.7e-40 167.5 113 71.7
THA.LOC104821808 Tarenaya hassleriana HOM05D006846 ORTHO05D008473 7.7e-40 167.5 113 69.9
SGA_v2.0_scaffold64G22040 Striga asiatica HOM05D006846 ORTHO05D008473 1.0e-39 167.2 170 54.7
Carub.0005s0005 Capsella rubella HOM05D006846 ORTHO05D008473 1.3e-39 166.8 112 70.5
Nitab4.5_0007368g0030 Nicotiana tabacum HOM05D006846 ORTHO05D008473 1.3e-39 166.8 120 67.5
PSO339G5299 Papaver somniferum HOM05D006846 ORTHO05D008473 1.3e-39 166.8 114 69.3
Potri.008G099700 Populus trichocarpa HOM05D006846 ORTHO05D008473 1.7e-39 166.4 147 56.5
Carub.0001s3726 Capsella rubella HOM05D003832 ORTHO05D004365 2.9e-39 165.6 112 69.6
CDE12G0609 Ceratophyllum demersum HOM05D006846 ORTHO05D008473 2.9e-39 165.6 126 63.5
Ciclev10007018m.g Citrus clementina HOM05D006846 ORTHO05D008473 2.9e-39 165.6 115 68.7
Aqoxy1G00358 Aquilegia oxysepala HOM05D006846 ORTHO05D008473 3.8e-39 165.2 137 62.8
Solyc06g053470.3 Solanum lycopersicum HOM05D006846 ORTHO05D008473 5.0e-39 164.9 121 66.1
Sopen06g018550 Solanum pennellii HOM05D006846 ORTHO05D008473 5.0e-39 164.9 121 66.1
PGSC0003DMG400016299 Solanum tuberosum HOM05D006846 ORTHO05D008473 5.0e-39 164.9 121 66.1
CARHR290870 Cardamine hirsuta HOM05D006846 ORTHO05D008473 8.6e-39 164.1 111 69.4
CARHR037810 Cardamine hirsuta HOM05D006846 ORTHO05D008473 2.5e-38 162.5 117 65.8
PSO384G1587 Papaver somniferum HOM05D006846 ORTHO05D008473 3.3e-38 162.2 113 67.3
FAN12G0803 Fragaria x ananassa HOM05D006846 ORTHO05D008473 4.3e-38 161.8 175 51.4
EL10Ac1g01060 Beta vulgaris HOM05D006846 ORTHO05D008473 5.6e-38 161.4 117 67.5
HanXRQChr09g0246471 Helianthus annuus HOM05D006846 ORTHO05D008473 5.6e-38 161.4 126 64.3
Zm00001eb359370 Zea mays HOM05D006846 ORTHO05D008473 7.3e-38 161.0 132 59.8
MBI11_g10320_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 9.5e-38 160.6 118 66.1
Sabra08G0075400 Salix brachista HOM05D006846 ORTHO05D008473 9.5e-38 160.6 155 53.5
CANSAT01G2167 Cannabis sativa HOM05D006846 ORTHO05D008473 1.0e-36 157.1 121 65.3
vmacro08003 Vaccinium macrocarpon HOM05D006846 ORTHO05D008473 1.0e-36 157.1 170 48.8
Dinv29523 Davidia involucrata HOM05D006846 ORTHO05D008473 2.3e-36 156.0 119 64.7
CAN.G136.4 Capsicum annuum HOM05D006846 ORTHO05D008473 4.0e-36 155.2 120 63.3
TWI73G0996 Tripterygium wilfordii HOM05D006846 ORTHO05D008473 3.7e-34 148.7 118 60.2
SalBow8G5328 Salvia bowleyana HOM05D006846 ORTHO05D008473 4.9e-34 148.3 133 59.4
unitig_744.g24645 Utricularia gibba HOM05D006846 ORTHO05D008473 5.4e-33 144.8 122 60.7
Cc03_g00240 Coffea canephora HOM05D006846 ORTHO05D008473 1.0e-31 140.6 95 68.4
COL.COLO4_34545 Corchorus olitorius HOM05D005582 ORTHO05D007028 1.3e-31 140.2 103 66.0
arahy.Tifrunner.gnm1.ann1.EYUN0W Arachis hypogaea HOM05D000385 ORTHO05D000269 5.0e-31 138.3 140 52.9
QL11p040346 Quercus lobata HOM05D006846 ORTHO05D008473 1.9e-30 136.3 139 54.7
Haze_00535 Corylus avellana HOM05D006846 ORTHO05D008473 2.5e-30 136.0 129 56.6
Haze_00536 Corylus avellana HOM05D006846 ORTHO05D008473 8.0e-29 131.0 129 55.0
Dinv29521 Davidia involucrata HOM05D006846 ORTHO05D008473 1.8e-28 129.8 103 62.1
MD16G1146600 Malus domestica HOM05D006846 ORTHO05D008473 3.1e-28 129.0 120 53.3
Gohir.A09G242000 Gossypium hirsutum HOM05D006846 ORTHO05D008473 1.3e-26 123.6 137 51.8
Mapoly0021s0070 Marchantia polymorpha HOM05D006846 ORTHO05D008473 2.2e-26 122.9 121 47.1
Pp3c9_17660 Physcomitrium patens HOM05D006846 ORTHO05D008473 2.9e-26 122.5 113 51.3
Glyma.09G078800 Glycine max HOM05D006846 ORTHO05D008473 4.9e-26 121.7 69 88.4
Nn4g26496 Nelumbo nucifera HOM05D006846 ORTHO05D008473 8.3e-26 120.9 121 54.5
HPP92_004479 Vanilla planifolia HOM05D006846 ORTHO05D008473 1.1e-25 120.6 87 65.5
MBI18_g09611_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 1.9e-25 119.8 101 58.4
Lsat_1_v5_gn_6_71441 Lactuca sativa HOM05D006846 ORTHO05D008473 2.0e-24 116.3 115 53.0
TAR365G0638 Trochodendron aralioides HOM05D006846 ORTHO05D008473 4.3e-22 108.6 73 71.2
CSS0050245 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 1.2e-21 107.1 72 69.4
ATR0693G432 Amborella trichopoda HOM05D006846 ORTHO05D008473 5.2e-20 101.7 87 57.5
ClCG04G007450 Citrullus lanatus HOM05D006846 ORTHO05D008473 1.7e-18 96.7 74 64.9
CSS0047848 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 8.3e-18 94.4 54 81.5
Cpa.g.sc146.38 Carica papaya HOM05D006846 ORTHO05D008473 9.5e-14 80.9 48 79.2
Hma1.2p1_0013F.1_g007960 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 1.4e-12 77.0 50 70.0
Zm00001eb158200 Zea mays HOM05D006846 ORTHO05D008473 2.3e-12 76.3 51 64.7
MBI19_g16347_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 6.8e-12 74.7 96 47.9
Dinv18032 Davidia involucrata HOM05D006846 ORTHO05D008473 3.9e-07 58.9 84 44.0
Thecc.01G162200 Theobroma cacao HOM05D006846 ORTHO05D008473 6.6e-07 58.2 60 53.3
AagrBONN_evm.TU.Sc2ySwM_117.777 Anthoceros agrestis HOM05D006846 ORTHO05D008473 2.5e-06 56.2 64 37.5


User provided reference genes

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