Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G218400 Phaseolus vulgaris HOM05D005423 ORTHO05D006223 1.7e-98 362.8 208 100.0
Glyma.15G191500 Glycine max HOM05D005423 ORTHO05D006223 4.6e-51 205.3 181 66.9
Ca_02385_v3 Cicer arietinum L. HOM05D005423 ORTHO05D006223 4.3e-25 119.0 185 45.4
TPR.G22906 Trifolium pratense HOM05D005423 ORTHO05D006223 9.6e-25 117.9 182 46.7
Cfa000754 Carpinus fangiana HOM05D005423 ORTHO05D006223 1.6e-24 117.1 192 42.7
Lj6g0018842 Lotus japonicus HOM05D005423 ORTHO05D006223 1.1e-23 114.4 179 47.5
FvH4_3g11440 Fragaria vesca HOM05D005423 ORTHO05D006223 1.2e-22 110.9 94 60.6
Hma1.2p1_0410F.1_g147050 Hydrangea macrophylla HOM05D005423 ORTHO05D006223 1.2e-22 110.9 169 43.8
FAN16G1003 Fragaria x ananassa HOM05D005423 ORTHO05D006223 1.5e-22 110.5 94 60.6
MD00G1097400 Malus domestica HOM05D005423 ORTHO05D006223 2.0e-22 110.2 169 43.2
Psat1g018720 Pisum sativum HOM05D005423 ORTHO05D006223 2.6e-22 109.8 180 47.2
Prupe.4G102300 Prunus persica HOM05D005423 ORTHO05D006223 9.9e-22 107.8 140 47.9
Lalb_Chr11g0073251 Lupinus albus HOM05D005423 ORTHO05D006223 2.9e-21 106.3 148 48.6
TAR636G0950 Trochodendron aralioides HOM05D005423 ORTHO05D006223 8.4e-21 104.8 100 54.0
CANSAT35G1706 Cannabis sativa HOM05D005423 ORTHO05D006223 4.2e-20 102.4 191 41.9
SGA_v2.0_scaffold1G00298 Striga asiatica HOM05D005423 ORTHO05D006223 7.1e-20 101.7 144 46.5
QL05p063092 Quercus lobata HOM05D005423 ORTHO05D006223 1.2e-19 100.9 186 38.7
Medtr2g047120 Medicago truncatula HOM05D005423 ORTHO05D006223 1.6e-19 100.5 183 43.2
AUR62007135 Chenopodium quinoa HOM05D005423 ORTHO05D006223 6.0e-19 98.6 93 51.6
Thecc.06G005400 Theobroma cacao HOM05D005423 ORTHO05D006223 1.0e-18 97.8 104 51.0
FAN23G0143 Fragaria x ananassa HOM05D005423 ORTHO05D006223 3.9e-18 95.9 83 57.8
Manes.03G066900 Manihot esculenta HOM05D005423 ORTHO05D006223 6.6e-18 95.1 165 41.8
EL10Ac5g10610 Beta vulgaris HOM05D005423 ORTHO05D006223 8.7e-18 94.7 107 45.8
CiPaw.09G149100 Carya illinoinensis HOM05D005423 ORTHO05D006223 8.7e-18 94.7 182 37.9
Lsat_1_v5_gn_1_91741 Lactuca sativa HOM05D005423 ORTHO05D006223 8.7e-18 94.7 156 38.5
AUR62008092 Chenopodium quinoa HOM05D005423 ORTHO05D006223 1.1e-17 94.4 103 49.5
Duzib160G0446 Durio zibethinus HOM05D005423 ORTHO05D006223 1.1e-17 94.4 104 50.0
Lj1P1155T48 Lonicera japonica HOM05D005423 ORTHO05D006223 1.1e-17 94.4 192 36.5
TWI38G0231 Tripterygium wilfordii HOM05D005423 ORTHO05D006223 1.1e-17 94.4 146 43.8
HanXRQChr01g0020631 Helianthus annuus HOM05D005423 ORTHO05D006223 1.9e-17 93.6 153 41.8
Nitab4.5_0006659g0010 Nicotiana tabacum HOM05D005423 ORTHO05D006223 1.9e-17 93.6 101 50.5
Sopen11g030350 Solanum pennellii HOM05D005423 ORTHO05D006223 1.9e-17 93.6 99 52.5
Ah.02g124440 Amaranthus hybridus HOM05D005423 ORTHO05D006223 2.5e-17 93.2 103 48.5
EL10Ac5g10640 Beta vulgaris HOM05D005423 ORTHO05D006223 2.5e-17 93.2 111 44.1
Nitab4.5_0004015g0040 Nicotiana tabacum HOM05D005423 ORTHO05D006223 2.5e-17 93.2 101 49.5
Solyc11g072680.1 Solanum lycopersicum HOM05D005423 ORTHO05D006223 3.3e-17 92.8 99 52.5
EL10Ac5g10674 Beta vulgaris HOM05D005423 ORTHO05D006223 4.3e-17 92.4 110 43.6
FvH4_5g18240 Fragaria vesca HOM05D005423 ORTHO05D006223 5.6e-17 92.0 90 56.7
Gohir.D02G104700 Gossypium hirsutum HOM05D005423 ORTHO05D006223 5.6e-17 92.0 187 37.4
FAN18G3875 Fragaria x ananassa HOM05D005423 ORTHO05D006223 7.3e-17 91.7 90 57.8
Atru.chr10.659 Acer truncatum HOM05D005423 ORTHO05D006223 1.3e-16 90.9 144 42.4
FvH4_1g24910 Fragaria vesca HOM05D005423 ORTHO05D006223 1.6e-16 90.5 100 51.0
CAN.G84.20 Capsicum annuum HOM05D005423 ORTHO05D006223 2.1e-16 90.1 97 49.5
Gorai.005G118900 Gossypium raimondii HOM05D005423 ORTHO05D006223 2.1e-16 90.1 187 36.9
FvH4_5g21920 Fragaria vesca HOM05D005423 ORTHO05D006223 2.8e-16 89.7 100 50.0
Sc04g0008360 Simmondsia chinensis HOM05D005423 ORTHO05D006223 2.8e-16 89.7 181 39.8
AUR62028667 Chenopodium quinoa HOM05D005423 ORTHO05D006223 3.6e-16 89.4 150 40.7
AUR62008089 Chenopodium quinoa HOM05D005423 ORTHO05D006223 1.4e-15 87.4 99 46.5
AUR62028668 Chenopodium quinoa HOM05D005423 ORTHO05D006223 2.4e-15 86.7 207 35.7
Migut.M01932 Erythranthe guttata HOM05D005423 ORTHO05D006223 3.1e-15 86.3 179 34.6
Gohir.A02G088801 Gossypium hirsutum HOM05D005423 ORTHO05D006223 3.1e-15 86.3 163 38.0
PGSC0003DMG400025363 Solanum tuberosum HOM05D005423 ORTHO05D006223 4.0e-15 85.9 201 37.3
Ciclev10017493m.g Citrus clementina HOM05D005423 ORTHO05D006223 6.9e-15 85.1 146 43.2
Potri.001G440800 Populus trichocarpa HOM05D005423 ORTHO05D006223 9.0e-15 84.7 153 36.6
Potri.011G155150 Populus trichocarpa HOM05D005423 ORTHO05D006223 2.0e-14 83.6 91 42.9
Aqoxy2G01436 Aquilegia oxysepala HOM05D005423 ORTHO05D006223 2.6e-14 83.2 94 44.7
AUR62008091 Chenopodium quinoa HOM05D005423 ORTHO05D006223 9.9e-14 81.3 207 34.3
MBI19_g30013_MAGBIO Magnolia biondii HOM05D005423 ORTHO05D006223 4.9e-13 79.0 96 42.7
Sc21g0002210 Simmondsia chinensis HOM05D005423 ORTHO05D006223 1.4e-12 77.4 100 46.0
MBI19_g33491_MAGBIO Magnolia biondii HOM05D005423 ORTHO05D006223 4.2e-12 75.9 100 40.0
Rhsim13G0126500 Rhododendron simsii HOM05D005423 ORTHO05D006223 4.2e-12 75.9 201 35.3
COL.COLO4_26869 Corchorus olitorius HOM05D005423 ORTHO05D006223 9.3e-12 74.7 96 47.9
THA.LOC104814335 Tarenaya hassleriana HOM05D005423 ORTHO05D006223 1.6e-11 73.9 101 48.5
Haze_05969 Corylus avellana HOM05D005423 ORTHO05D006223 2.1e-11 73.6 166 38.0
Sc21g0002200 Simmondsia chinensis HOM05D005423 ORTHO05D006223 2.7e-11 73.2 182 37.4
Carub.0001s2910 Capsella rubella HOM05D005423 ORTHO05D006223 3.5e-11 72.8 105 44.8
CARHR030270 Cardamine hirsuta HOM05D005423 ORTHO05D006223 4.6e-11 72.4 101 45.5
PSO782G2497 Papaver somniferum HOM05D005423 ORTHO05D006223 1.3e-10 70.9 101 39.6
AL1G44970 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 1.8e-10 70.5 106 42.5
Thhalv10009325m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 2.3e-10 70.1 109 44.0
FvH4_6g29350 Fragaria vesca HOM05D005423 ORTHO05D006223 3.9e-10 69.3 76 52.6
AT1G30800 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 5.1e-10 68.9 110 40.9
CDE04G0856 Ceratophyllum demersum HOM05D005423 ORTHO05D006223 5.1e-10 68.9 174 35.6
BcaB04g18206 Brassica carinata HOM05D005423 ORTHO05D006223 6.7e-10 68.6 105 41.0
BraA08t33095Z Brassica rapa HOM05D005423 ORTHO05D006223 1.1e-09 67.8 105 39.0
CDE04G2898 Ceratophyllum demersum HOM05D005423 ORTHO05D006223 1.1e-09 67.8 109 44.0
Sp1g26680 Schrenkiella parvula HOM05D005423 ORTHO05D006223 1.5e-09 67.4 106 42.5
Aqoxy7G03258 Aquilegia oxysepala HOM05D005423 ORTHO05D006223 1.9e-09 67.0 68 45.6
BcaB01g00727 Brassica carinata HOM05D005423 ORTHO05D006223 1.9e-09 67.0 97 42.3
BcaC07g37806 Brassica carinata HOM05D005423 ORTHO05D006223 1.9e-09 67.0 105 41.0
BolC8t48195H Brassica oleracea HOM05D005423 ORTHO05D006223 1.9e-09 67.0 105 41.0
A06p18470 Brassica napus HOM05D005423 ORTHO05D006223 2.5e-09 66.6 97 41.2
A08p11040 Brassica napus HOM05D005423 ORTHO05D006223 2.5e-09 66.6 105 40.0
C08p24310 Brassica napus HOM05D005423 ORTHO05D006223 7.4e-09 65.1 97 40.2
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 7.4e-09 65.1 95 42.1
Aa31LG6G12020 Aethionema arabicum HOM05D005423 ORTHO05D006223 1.3e-08 64.3 103 42.7
BcaC07g39399 Brassica carinata HOM05D005423 ORTHO05D006223 1.6e-08 63.9 97 40.2
BolC8t50049H Brassica oleracea HOM05D005423 ORTHO05D006223 1.6e-08 63.9 97 40.2
Carub.0006s3088 Capsella rubella HOM05D005423 ORTHO05D006223 2.8e-08 63.2 204 32.4
Sabra16G0300100 Salix brachista HOM05D005423 ORTHO05D006223 3.7e-08 62.8 69 46.4
AT4G12950 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 8.1e-08 61.6 95 42.1
FAN25G0767 Fragaria x ananassa HOM05D005423 ORTHO05D006223 8.1e-08 61.6 56 60.7
Sabra16G0298100 Salix brachista HOM05D005423 ORTHO05D006223 8.1e-08 61.6 69 44.9
FAN11G1050 Fragaria x ananassa HOM05D005423 ORTHO05D006223 1.1e-07 61.2 65 55.4
PSO210G3101 Papaver somniferum HOM05D005423 ORTHO05D006223 1.1e-07 61.2 100 37.0
CARHR237890 Cardamine hirsuta HOM05D005423 ORTHO05D006223 1.4e-07 60.8 95 40.0
DCAR_001448 Daucus carota HOM05D005423 ORTHO05D006223 4.0e-07 59.3 106 37.7
Duzib043G0004 Durio zibethinus HOM05D005423 ORTHO05D006223 4.0e-07 59.3 43 60.5
FAN03G0475 Fragaria x ananassa HOM05D005423 ORTHO05D006223 4.0e-07 59.3 62 56.5
FAN14G5542 Fragaria x ananassa HOM05D005423 ORTHO05D006223 4.0e-07 59.3 62 56.5
FAN21G0600 Fragaria x ananassa HOM05D005423 ORTHO05D006223 4.0e-07 59.3 56 58.9
Thhalv10026388m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 5.3e-07 58.9 90 38.9
Sp7g27780 Schrenkiella parvula HOM05D005423 ORTHO05D006223 6.9e-07 58.5 90 40.0
Carub.0007s1066 Capsella rubella HOM05D005423 ORTHO05D006223 9.0e-07 58.2 95 37.9
AL7G22260 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 1.2e-06 57.8 95 37.9
A03p59360 Brassica napus HOM05D005423 ORTHO05D006223 1.2e-06 57.8 93 36.6
BraA03t14993Z Brassica rapa HOM05D005423 ORTHO05D006223 1.2e-06 57.8 93 36.6
AT4G29980 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 1.5e-06 57.4 95 36.8
FAN18G0575 Fragaria x ananassa HOM05D005423 ORTHO05D006223 1.5e-06 57.4 62 54.8
BcaNung00507 Brassica carinata HOM05D005423 ORTHO05D006223 2.0e-06 57.0 94 36.2
C07p57390 Brassica napus HOM05D005423 ORTHO05D006223 2.6e-06 56.6 90 36.7
BolC7t46208H Brassica oleracea HOM05D005423 ORTHO05D006223 2.6e-06 56.6 90 36.7


User provided reference genes

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