Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G216400 Phaseolus vulgaris HOM05D005265 ORTHO05D006326 2.7e-65 251.9 130 100.0
VMungo1309G1099 Vigna mungo HOM05D005265 ORTHO05D006326 5.5e-63 244.2 130 96.9
Phvul.002G140800 Phaseolus vulgaris HOM05D005265 ORTHO05D006326 4.7e-62 241.1 130 96.2
Glyma.15G194300 Glycine max HOM05D005265 ORTHO05D006326 8.0e-62 240.4 130 95.4
arahy.Tifrunner.gnm1.ann1.9042LP Arachis hypogaea HOM05D005265 ORTHO05D006326 1.5e-60 236.1 130 92.3
arahy.Tifrunner.gnm1.ann1.ZS1M1K Arachis hypogaea HOM05D005265 ORTHO05D006326 1.7e-59 232.6 130 90.8
Lj1g0015817 Lotus japonicus HOM05D005265 ORTHO05D006326 3.7e-59 231.5 130 90.8
Glyma.09G087700 Glycine max HOM05D005265 ORTHO05D006326 8.3e-59 230.3 133 93.2
Thecc.02G010800 Theobroma cacao HOM05D005265 ORTHO05D006326 9.1e-58 226.9 130 89.2
Cpa.g.sc17.68 Carica papaya HOM05D005265 ORTHO05D006326 2.0e-57 225.7 130 88.5
Duzib132G0868 Durio zibethinus HOM05D005265 ORTHO05D006326 2.0e-57 225.7 130 88.5
Ca_12734_v3 Cicer arietinum L. HOM05D005265 ORTHO05D006326 2.7e-57 225.3 131 89.3
Ca_12740_v3 Cicer arietinum L. HOM05D005265 ORTHO05D006326 2.7e-57 225.3 131 89.3
GSVIVG01021584001 Vitis vinifera HOM05D005265 ORTHO05D006326 3.5e-57 224.9 130 88.5
CiPaw.10G086700 Carya illinoinensis HOM05D005265 ORTHO05D006326 4.5e-57 224.6 130 86.9
Lalb_Chr08g0233241 Lupinus albus HOM05D005265 ORTHO05D006326 5.9e-57 224.2 130 86.2
CiPaw.09G117100 Carya illinoinensis HOM05D005265 ORTHO05D006326 2.3e-56 222.2 130 86.9
PGR083G1323 Punica granatum HOM05D005265 ORTHO05D006326 2.9e-56 221.9 130 87.7
COL.COLO4_17668 Corchorus olitorius HOM05D005265 ORTHO05D006326 3.8e-56 221.5 130 84.6
Gohir.D02G238400 Gossypium hirsutum HOM05D005265 ORTHO05D006326 3.8e-56 221.5 129 86.8
Gorai.005G266900 Gossypium raimondii HOM05D005265 ORTHO05D006326 3.8e-56 221.5 129 86.8
Solyc08g006930.3 Solanum lycopersicum HOM05D005265 ORTHO05D006326 8.6e-56 220.3 131 86.3
CANSAT35G0137 Cannabis sativa HOM05D005265 ORTHO05D006326 1.1e-55 219.9 130 85.4
Dinv15893 Davidia involucrata HOM05D005265 ORTHO05D006326 1.1e-55 219.9 131 86.3
Nitab4.5_0003368g0030 Nicotiana tabacum HOM05D005265 ORTHO05D006326 1.1e-55 219.9 131 87.0
PGSC0003DMG400020505 Solanum tuberosum HOM05D005265 ORTHO05D006326 1.1e-55 219.9 131 86.3
CAN.G1882.1 Capsicum annuum HOM05D005265 ORTHO05D006326 1.5e-55 219.5 131 86.3
Hma1.2p1_0689F.1_g203690 Hydrangea macrophylla HOM05D005265 ORTHO05D006326 2.5e-55 218.8 131 86.3
Hma1.2p1_1418F.1_g282220 Hydrangea macrophylla HOM05D005265 ORTHO05D006326 2.5e-55 218.8 131 86.3
Sopen08g002900 Solanum pennellii HOM05D005265 ORTHO05D006326 2.5e-55 218.8 131 85.5
Gohir.A03G216800 Gossypium hirsutum HOM05D005265 ORTHO05D006326 3.3e-55 218.4 129 86.0
Nitab4.5_0002991g0030 Nicotiana tabacum HOM05D005265 ORTHO05D006326 3.3e-55 218.4 131 86.3
CSS0007721 Camellia sinensis var. sinensis HOM05D005265 ORTHO05D006326 1.2e-54 216.5 132 84.8
CSS0016265 Camellia sinensis var. sinensis HOM05D005265 ORTHO05D006326 1.2e-54 216.5 132 84.8
Peaxi162Scf00045g02242 Petunia axillaris HOM05D005265 ORTHO05D006326 1.2e-54 216.5 132 86.4
Atru.chr10.966 Acer truncatum HOM05D005265 ORTHO05D006326 1.6e-54 216.1 130 86.2
CARHR029770 Cardamine hirsuta HOM05D005265 ORTHO05D006326 2.1e-54 215.7 131 85.5
Eucgr.D00234 Eucalyptus grandis HOM05D005265 ORTHO05D006326 2.8e-54 215.3 131 85.5
Dinv32199 Davidia involucrata HOM05D005265 ORTHO05D006326 4.7e-54 214.5 131 84.0
Migut.M01877 Erythranthe guttata HOM05D005265 ORTHO05D006326 6.1e-54 214.2 131 84.0
Manes.06G061100 Manihot esculenta HOM05D005265 ORTHO05D006326 6.1e-54 214.2 129 82.9
Sp1g26220 Schrenkiella parvula HOM05D005265 ORTHO05D006326 6.1e-54 214.2 131 84.7
Haze_05746 Corylus avellana HOM05D005265 ORTHO05D006326 8.0e-54 213.8 131 84.0
AT1G30380 Arabidopsis thaliana HOM05D005265 ORTHO05D006326 1.0e-53 213.4 131 84.0
Manes.14G134800 Manihot esculenta HOM05D005265 ORTHO05D006326 1.4e-53 213.0 130 82.3
Medtr1g026820 Medicago truncatula HOM05D005265 ORTHO05D006326 1.4e-53 213.0 131 84.0
BcaC01g00188 Brassica carinata HOM05D005265 ORTHO05D006326 3.0e-53 211.8 131 84.0
A08p24490 Brassica napus HOM05D005265 ORTHO05D006326 3.0e-53 211.8 131 84.0
C03p76720 Brassica napus HOM05D005265 ORTHO05D006326 3.0e-53 211.8 131 84.0
BraA08t34405Z Brassica rapa HOM05D005265 ORTHO05D006326 3.0e-53 211.8 131 84.0
Ciclev10017170m.g Citrus clementina HOM05D005265 ORTHO05D006326 3.0e-53 211.8 127 84.3
QL05p054070 Quercus lobata HOM05D005265 ORTHO05D006326 3.0e-53 211.8 130 82.3
BcaB03g12211 Brassica carinata HOM05D005265 ORTHO05D006326 4.0e-53 211.5 131 84.0
Duzib248G0887 Durio zibethinus HOM05D005265 ORTHO05D006326 4.0e-53 211.5 130 85.4
MSTRG.7528 Avicennia marina HOM05D005265 ORTHO05D006326 6.8e-53 210.7 133 82.0
THA.LOC104812683 Tarenaya hassleriana HOM05D005265 ORTHO05D006326 8.9e-53 210.3 131 84.0
TAR624G1044 Trochodendron aralioides HOM05D005265 ORTHO05D006326 8.9e-53 210.3 130 83.1
Aqoxy4G00026 Aquilegia oxysepala HOM05D005265 ORTHO05D006326 1.2e-52 209.9 129 82.2
THA.LOC104814318 Tarenaya hassleriana HOM05D005265 ORTHO05D006326 1.2e-52 209.9 133 85.0
Nitab4.5_0000100g0280 Nicotiana tabacum HOM05D005265 ORTHO05D006326 1.5e-52 209.5 131 82.4
Nitab4.5_0001809g0020 Nicotiana tabacum HOM05D005265 ORTHO05D006326 1.5e-52 209.5 131 82.4
BraA09t39132Z Brassica rapa HOM05D005265 ORTHO05D006326 2.0e-52 209.1 132 84.1
Cfa000859 Carpinus fangiana HOM05D005265 ORTHO05D006326 2.0e-52 209.1 131 82.4
EL10Ac7g15766 Beta vulgaris HOM05D005265 ORTHO05D006326 2.6e-52 208.8 130 81.5
Potri.006G254200 Populus trichocarpa HOM05D005265 ORTHO05D006326 2.6e-52 208.8 131 87.0
AUR62038135 Chenopodium quinoa HOM05D005265 ORTHO05D006326 3.4e-52 208.4 131 83.2
ClCG01G025030 Citrullus lanatus HOM05D005265 ORTHO05D006326 3.4e-52 208.4 131 82.4
BcaC05g27071 Brassica carinata HOM05D005265 ORTHO05D006326 5.7e-52 207.6 132 83.3
A09p36080 Brassica napus HOM05D005265 ORTHO05D006326 5.7e-52 207.6 132 83.3
C05p29330 Brassica napus HOM05D005265 ORTHO05D006326 5.7e-52 207.6 132 83.3
BolC5t31665H Brassica oleracea HOM05D005265 ORTHO05D006326 5.7e-52 207.6 132 83.3
Cc09_g08490 Coffea canephora HOM05D005265 ORTHO05D006326 5.7e-52 207.6 131 80.9
DCAR_004804 Daucus carota HOM05D005265 ORTHO05D006326 7.5e-52 207.2 131 81.7
DCAR_004805 Daucus carota HOM05D005265 ORTHO05D006326 7.5e-52 207.2 131 82.4
Oeu040090.1 Olea europaea HOM05D005265 ORTHO05D006326 7.5e-52 207.2 131 81.7
Actinidia13436 Actinidia chinensis HOM05D005265 ORTHO05D006326 9.8e-52 206.8 130 82.3
AL1G44320 Arabidopsis lyrata HOM05D005265 ORTHO05D006326 9.8e-52 206.8 132 82.6
Carub.0001s2858 Capsella rubella HOM05D005265 ORTHO05D006326 9.8e-52 206.8 131 84.0
RcHm_v2.0_Chr5g0015361 Rosa chinensis HOM05D005265 ORTHO05D006326 9.8e-52 206.8 129 82.9
SalBow8G5437 Salvia bowleyana HOM05D005265 ORTHO05D006326 9.8e-52 206.8 131 82.4
HanXRQChr04g0113581 Helianthus annuus HOM05D005265 ORTHO05D006326 1.3e-51 206.5 131 81.7
Thhalv10009090m.g Eutrema salsugineum HOM05D005265 ORTHO05D006326 1.7e-51 206.1 132 82.6
MD00G1109700 Malus domestica HOM05D005265 ORTHO05D006326 2.2e-51 205.7 131 80.9
Prupe.4G088200 Prunus persica HOM05D005265 ORTHO05D006326 2.2e-51 205.7 129 81.4
Duzib052G0655 Durio zibethinus HOM05D005265 ORTHO05D006326 2.8e-51 205.3 131 82.4
FAN16G0550 Fragaria x ananassa HOM05D005265 ORTHO05D006326 2.8e-51 205.3 129 82.2
FAN25G1721 Fragaria x ananassa HOM05D005265 ORTHO05D006326 2.8e-51 205.3 129 82.2
Sed0012654 Sechium edule HOM05D005265 ORTHO05D006326 2.8e-51 205.3 131 83.2
Sc24g0001600 Simmondsia chinensis HOM05D005265 ORTHO05D006326 2.8e-51 205.3 131 80.2
TAR626G0103 Trochodendron aralioides HOM05D005265 ORTHO05D006326 3.7e-51 204.9 131 81.7
TPR.G24497 Trifolium pratense HOM05D005265 ORTHO05D006326 4.9e-51 204.5 132 81.8
AUR62009823 Chenopodium quinoa HOM05D005265 ORTHO05D006326 6.3e-51 204.1 131 81.7
TAR626G0742 Trochodendron aralioides HOM05D005265 ORTHO05D006326 8.3e-51 203.8 129 80.6
SGA_v2.0_scaffold223G42844 Striga asiatica HOM05D005265 ORTHO05D006326 1.1e-50 203.4 131 80.9
ECA236G4370 Erigeron canadensis HOM05D005265 ORTHO05D006326 1.4e-50 203.0 133 80.5
FvH4_3g09680 Fragaria vesca HOM05D005265 ORTHO05D006326 1.8e-50 202.6 129 80.6
FAN11G2263 Fragaria x ananassa HOM05D005265 ORTHO05D006326 1.8e-50 202.6 129 80.6
MD05G1276100 Malus domestica HOM05D005265 ORTHO05D006326 1.8e-50 202.6 136 78.7
Aa31LG6G5400 Aethionema arabicum HOM05D005265 ORTHO05D006326 2.4e-50 202.2 132 80.3
BcaB07g32648 Brassica carinata HOM05D005265 ORTHO05D006326 3.1e-50 201.8 131 81.7
PSO541G2745 Papaver somniferum HOM05D005265 ORTHO05D006326 5.4e-50 201.1 129 80.6
PSO675G1042 Papaver somniferum HOM05D005265 ORTHO05D006326 5.4e-50 201.1 129 80.6
Potri.018G027600 Populus trichocarpa HOM05D005265 ORTHO05D006326 5.4e-50 201.1 133 82.7
Sabra18G0029900 Salix brachista HOM05D005265 ORTHO05D006326 5.4e-50 201.1 131 82.4
TWI09G0405 Tripterygium wilfordii HOM05D005265 ORTHO05D006326 7.0e-50 200.7 132 78.0
unitig_61.g26080 Utricularia gibba HOM05D005265 ORTHO05D006326 7.0e-50 200.7 127 81.1
BolC3t19927H Brassica oleracea HOM05D005265 ORTHO05D006326 9.2e-50 200.3 130 80.8
MELO3C007091.2 Cucumis melo HOM05D005265 ORTHO05D006326 1.2e-49 199.9 131 81.7
CsaV3_6G052210 Cucumis sativus L. HOM05D005265 ORTHO05D006326 1.6e-49 199.5 129 82.2
HanXRQChr15g0481551 Helianthus annuus HOM05D005265 ORTHO05D006326 2.0e-49 199.1 128 81.2
Sed0026922 Sechium edule HOM05D005265 ORTHO05D006326 2.0e-49 199.1 132 80.3
vmacro03415 Vaccinium macrocarpon HOM05D005265 ORTHO05D006326 2.0e-49 199.1 130 78.5
Actinidia33666 Actinidia chinensis HOM05D005265 ORTHO05D006326 2.7e-49 198.7 130 79.2
CDE01G0641 Ceratophyllum demersum HOM05D005265 ORTHO05D006326 2.7e-49 198.7 129 76.0
CDE12G0489 Ceratophyllum demersum HOM05D005265 ORTHO05D006326 4.5e-49 198.0 129 75.2
TWI73G0862 Tripterygium wilfordii HOM05D005265 ORTHO05D006326 1.0e-48 196.8 132 77.3
Ah.08g216220 Amaranthus hybridus HOM05D000506 ORTHO05D000369 2.9e-48 195.3 123 79.7
Psat0s1315g0080 Pisum sativum HOM05D005265 ORTHO05D006326 8.6e-48 193.7 162 67.3
MBI02_g44634_MAGBIO Magnolia biondii HOM05D005265 ORTHO05D006326 1.5e-47 193.0 129 77.5
MBI02_g40641_MAGBIO Magnolia biondii HOM05D005265 ORTHO05D006326 7.3e-47 190.7 129 76.7
Lsat_1_v5_gn_7_32001 Lactuca sativa HOM05D005265 ORTHO05D006326 4.7e-46 188.0 133 76.7
Lalb_Chr23g0275991 Lupinus albus HOM05D005265 ORTHO05D006326 1.4e-45 186.4 103 90.3
Rhsim13G0119400 Rhododendron simsii HOM05D005265 ORTHO05D006326 3.1e-45 185.3 130 75.4
FAN21G2293 Fragaria x ananassa HOM05D005265 ORTHO05D006326 2.0e-44 182.6 177 59.3
HPP92_019500 Vanilla planifolia HOM05D005265 ORTHO05D006326 2.2e-43 179.1 128 74.2
ATR0681G400 Amborella trichopoda HOM05D005265 ORTHO05D006326 1.9e-42 176.0 123 74.0
Hund18717 Selenicereus undatus HOM05D005265 ORTHO05D006326 1.9e-42 176.0 136 69.1
Os07g0148900 Oryza sativa ssp. japonica HOM05D005265 ORTHO05D006326 7.0e-42 174.1 126 71.4
Zm00001eb299990 Zea mays HOM05D005265 ORTHO05D006326 2.0e-41 172.6 131 71.0
Pp3c13_10540 Physcomitrium patens HOM05D005265 ORTHO05D006326 3.0e-40 168.7 130 70.8
Mapoly0125s0033 Marchantia polymorpha HOM05D005265 ORTHO05D006326 5.0e-40 167.9 132 69.7
Pp3c3_10740 Physcomitrium patens HOM05D005265 ORTHO05D006326 4.3e-39 164.9 131 69.5
Sp4g16930 Schrenkiella parvula HOM05D005265 ORTHO05D006326 1.6e-38 162.9 133 66.9
SEGI_05857 Sequoiadendron giganteum HOM05D005265 ORTHO05D006326 4.7e-38 161.4 131 66.4
Nn4g26654 Nelumbo nucifera HOM05D005265 ORTHO05D006326 1.7e-35 152.9 128 71.1
Nn3g20272 Nelumbo nucifera HOM05D005265 ORTHO05D006326 1.4e-34 149.8 128 68.0
Pp3c13_10520 Physcomitrium patens HOM05D005265 ORTHO05D006326 1.7e-32 142.9 130 61.5
AagrBONN_evm.TU.Sc2ySwM_369.184 Anthoceros agrestis HOM05D005265 ORTHO05D006326 3.0e-32 142.1 136 60.3
CBR_g39729 Chara braunii HOM05D005265 ORTHO05D006326 7.1e-26 120.9 116 58.6
SMO358G0410 Selaginella moellendorffii HOM05D005265 ORTHO05D006326 7.3e-23 110.9 78 73.1
Cre17.g724300 Chlamydomonas reinhardtii HOM05D005265 ORTHO05D006326 4.0e-21 105.1 105 55.2
Nn8g40769 Nelumbo nucifera HOM05D005265 ORTHO05D006326 4.2e-18 95.1 67 70.1
RcHm_v2.0_Chr5g0036151 Rosa chinensis HOM05D005265 ORTHO05D006326 1.5e-12 76.6 48 79.2
PRCOL_00005455 Prasinoderma coloniale HOM05D005265 ORTHO05D006326 2.7e-09 65.9 92 41.3
MCO04G068 Micromonas commoda HOM05D005265 ORTHO05D006326 6.6e-08 61.2 122 36.1


User provided reference genes

Program Settings