Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G215100 Phaseolus vulgaris HOM05D007471 ORTHO05D009481 5.3e-119 431.0 215 100.0
Phvul.009G214800 Phaseolus vulgaris HOM05D007471 ORTHO05D009481 3.0e-114 415.2 241 88.8
VMungo1309G3041 Vigna mungo HOM05D007471 ORTHO05D009481 2.2e-104 382.5 241 81.3
Glyma.15G195100 Glycine max HOM05D007471 ORTHO05D009481 4.7e-91 338.2 242 74.4
Glyma.09G086000 Glycine max HOM05D007471 ORTHO05D009481 4.4e-89 331.6 242 73.1
Lj6g0025127 Lotus japonicus HOM05D007471 ORTHO05D009481 4.1e-79 298.5 243 64.6
Psat1g019920 Pisum sativum HOM05D007471 ORTHO05D009481 2.9e-77 292.4 243 64.6
Lalb_Chr10g0094201 Lupinus albus HOM05D007471 ORTHO05D009481 6.5e-77 291.2 242 64.5
Medtr2g049140 Medicago truncatula HOM05D007471 ORTHO05D009481 1.2e-70 270.4 242 62.0
Ca_02565_v3 Cicer arietinum L. HOM05D007471 ORTHO05D009481 2.3e-66 256.1 213 64.8
Ciclev10016450m.g Citrus clementina HOM05D007471 ORTHO05D009481 3.5e-54 215.7 243 45.7
QL04p066931 Quercus lobata HOM05D007471 ORTHO05D009481 3.0e-53 212.6 242 47.5
MD17G1121200 Malus domestica HOM05D007471 ORTHO05D009481 6.8e-50 201.4 240 45.8
Manes.12G067200 Manihot esculenta HOM05D007471 ORTHO05D009481 6.8e-50 201.4 243 43.6
Cpa.g.sc136.59 Carica papaya HOM05D007471 ORTHO05D009481 8.9e-50 201.1 243 43.2
Haze_12583 Corylus avellana HOM05D007471 ORTHO05D009481 1.2e-49 200.7 241 48.5
MD17G1122600 Malus domestica HOM05D007471 ORTHO05D009481 1.2e-49 200.7 240 45.8
TAR626G0037 Trochodendron aralioides HOM05D007471 ORTHO05D009481 3.4e-49 199.1 243 42.8
Dinv05327 Davidia involucrata HOM05D007471 ORTHO05D009481 4.4e-49 198.7 244 43.9
RcHm_v2.0_Chr2g0155251 Rosa chinensis HOM05D007471 ORTHO05D009481 4.4e-49 198.7 240 44.6
Eucgr.K01386 Eucalyptus grandis HOM05D007471 ORTHO05D009481 9.8e-49 197.6 244 44.7
Sed0023252 Sechium edule HOM05D007471 ORTHO05D009481 2.2e-48 196.4 244 42.6
TWI36G0936 Tripterygium wilfordii HOM05D007471 ORTHO05D009481 6.4e-48 194.9 242 45.5
Actinidia12353 Actinidia chinensis HOM05D007471 ORTHO05D009481 1.9e-47 193.4 243 41.6
TPR.G20279 Trifolium pratense HOM05D007471 ORTHO05D009481 2.4e-47 193.0 213 55.4
FvH4_6g40230 Fragaria vesca HOM05D007471 ORTHO05D009481 3.5e-46 189.1 240 42.9
PGR044G0015 Punica granatum HOM05D007471 ORTHO05D009481 4.6e-46 188.7 242 41.7
MELO3C024177.2 Cucumis melo HOM05D007471 ORTHO05D009481 7.8e-46 188.0 247 40.5
FAN14G4986 Fragaria x ananassa HOM05D007471 ORTHO05D009481 1.3e-45 187.2 240 42.9
CSS0003771 Camellia sinensis var. sinensis HOM05D007471 ORTHO05D009481 3.0e-45 186.0 244 41.4
GSVIVG01030129001 Vitis vinifera HOM05D007471 ORTHO05D009481 8.6e-45 184.5 236 44.5
CsaV3_7G002330 Cucumis sativus L. HOM05D007471 ORTHO05D009481 1.5e-44 183.7 247 39.3
FAN05G3962 Fragaria x ananassa HOM05D007471 ORTHO05D009481 2.5e-44 183.0 240 42.1
Lj8A138T38 Lonicera japonica HOM05D007471 ORTHO05D009481 3.3e-44 182.6 244 42.2
FAN09G1454 Fragaria x ananassa HOM05D007471 ORTHO05D009481 4.3e-44 182.2 240 41.7
Rhsim06G0179200 Rhododendron simsii HOM05D000358 ORTHO05D001562 5.6e-44 181.8 241 41.1
Hma1.2p1_0599F.1_g186930 Hydrangea macrophylla HOM05D007471 ORTHO05D009481 1.6e-43 180.3 244 41.8
Cc05_g01930 Coffea canephora HOM05D007471 ORTHO05D009481 2.3e-42 176.4 246 43.1
BcaB03g14688 Brassica carinata HOM05D007471 ORTHO05D009481 3.1e-42 176.0 242 37.6
PSO210G0038 Papaver somniferum HOM05D007471 ORTHO05D009481 3.1e-42 176.0 243 38.7
PSO210G4841 Papaver somniferum HOM05D007471 ORTHO05D009481 6.8e-42 174.9 245 38.8
Sp3g06580 Schrenkiella parvula HOM05D007471 ORTHO05D009481 6.8e-42 174.9 242 37.2
MSTRG.6626 Avicennia marina HOM05D007471 ORTHO05D009481 8.9e-42 174.5 240 41.2
Nitab4.5_0003086g0070 Nicotiana tabacum HOM05D007471 ORTHO05D009481 8.9e-42 174.5 244 40.2
HanXRQChr09g0257421 Helianthus annuus HOM05D007471 ORTHO05D009481 1.5e-41 173.7 240 43.3
TPR.G28406 Trifolium pratense HOM05D007471 ORTHO05D009481 4.4e-41 172.2 201 52.2
AL3G19000 Arabidopsis lyrata HOM05D007471 ORTHO05D009481 5.8e-41 171.8 242 37.2
CARHR082340 Cardamine hirsuta HOM05D007471 ORTHO05D009481 7.5e-41 171.4 242 37.6
AT3G07640 Arabidopsis thaliana HOM05D007471 ORTHO05D009481 2.2e-40 169.9 242 36.4
SalBow7G1274 Salvia bowleyana HOM05D007471 ORTHO05D009481 2.9e-40 169.5 243 42.0
BcaC01g04271 Brassica carinata HOM05D007471 ORTHO05D009481 3.7e-40 169.1 242 38.8
C03p43000 Brassica napus HOM05D007471 ORTHO05D009481 3.7e-40 169.1 242 38.8
THA.LOC104819026 Tarenaya hassleriana HOM05D007471 ORTHO05D009481 4.9e-40 168.7 244 38.5
Migut.M00062 Erythranthe guttata HOM05D007471 ORTHO05D009481 6.4e-40 168.3 243 39.9
Sc21g0000400 Simmondsia chinensis HOM05D007471 ORTHO05D009481 6.4e-40 168.3 245 38.0
Lsat_1_v5_gn_9_102921 Lactuca sativa HOM05D007471 ORTHO05D009481 1.1e-39 167.5 241 40.2
ATR0751G158 Amborella trichopoda HOM05D007471 ORTHO05D009481 1.4e-39 167.2 241 39.0
A03p35390 Brassica napus HOM05D007471 ORTHO05D009481 3.2e-39 166.0 242 37.2
BraA03t12717Z Brassica rapa HOM05D007471 ORTHO05D009481 3.2e-39 166.0 242 37.2
Nn1g07565 Nelumbo nucifera HOM05D007471 ORTHO05D009481 3.2e-39 166.0 243 37.4
BolC3t16568H Brassica oleracea HOM05D007471 ORTHO05D009481 4.1e-39 165.6 242 37.6
Carub.0003s0722 Capsella rubella HOM05D007471 ORTHO05D009481 4.1e-39 165.6 244 36.1
Cfa014199 Carpinus fangiana HOM05D005171 ORTHO05D006343 1.2e-38 164.1 237 42.2
Atru.BG.43.p Acer truncatum HOM05D007471 ORTHO05D009481 2.1e-38 163.3 176 50.6
Solyc07g045150.3 Solanum lycopersicum HOM05D007471 ORTHO05D009481 2.7e-38 162.9 244 38.9
Sopen07g023700 Solanum pennellii HOM05D007471 ORTHO05D009481 3.5e-38 162.5 244 38.9
Peaxi162Scf00359g00320 Petunia axillaris HOM05D007471 ORTHO05D009481 4.6e-38 162.2 241 36.5
Thhalv10021420m.g Eutrema salsugineum HOM05D007471 ORTHO05D009481 6.0e-38 161.8 242 35.1
ClCG02G003070 Citrullus lanatus HOM05D007471 ORTHO05D009481 1.3e-37 160.6 292 32.9
MBI14_g27042_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 1.3e-37 160.6 232 38.8
FAN02G2672 Fragaria x ananassa HOM05D007471 ORTHO05D009481 3.0e-37 159.5 216 41.2
vmacro12060 Vaccinium macrocarpon HOM05D007471 ORTHO05D009481 1.1e-36 157.5 192 45.8
PGSC0003DMG402017414 Solanum tuberosum HOM05D007471 ORTHO05D009481 1.9e-36 156.8 244 37.7
Aa31LG5G18220 Aethionema arabicum HOM05D007471 ORTHO05D009481 2.5e-36 156.4 265 34.7
ECA240G3131 Erigeron canadensis HOM05D001349 ORTHO05D001980 8.1e-35 151.4 240 38.3
AUR62037766 Chenopodium quinoa HOM05D007471 ORTHO05D009481 2.3e-34 149.8 236 34.3
AUR62018237 Chenopodium quinoa HOM05D007471 ORTHO05D009481 5.2e-34 148.7 236 35.6
Oeu000672.1 Olea europaea HOM05D007471 ORTHO05D009481 3.4e-33 146.0 175 44.0
CAN.G826.3 Capsicum annuum HOM05D007471 ORTHO05D009481 9.9e-33 144.4 243 35.8
DCAR_019662 Daucus carota HOM05D007471 ORTHO05D009481 6.4e-32 141.7 176 44.9
Prupe.3G192700 Prunus persica HOM05D007471 ORTHO05D009481 1.7e-29 133.7 172 41.3
Thecc.01G199800 Theobroma cacao HOM05D007471 ORTHO05D009481 3.6e-27 125.9 248 34.7
BcaB03g14686 Brassica carinata HOM05D007471 ORTHO05D009481 1.5e-25 120.6 212 32.5
Os02g0582400 Oryza sativa ssp. japonica HOM05D007471 ORTHO05D009481 2.2e-24 116.7 241 31.5
Zm00001eb245410 Zea mays HOM05D007471 ORTHO05D009481 2.9e-24 116.3 243 32.1
Duzib133G1025 Durio zibethinus HOM05D007471 ORTHO05D009481 1.4e-23 114.0 248 32.7
CDE11G0370 Ceratophyllum demersum HOM05D007471 ORTHO05D009481 2.4e-23 113.2 252 32.1
THA.LOC104822442 Tarenaya hassleriana HOM05D007471 ORTHO05D009481 2.4e-23 113.2 246 32.1
CSS0004770 Camellia sinensis var. sinensis HOM05D007471 ORTHO05D009481 3.2e-23 112.8 169 37.3
Gohir.D07G199700 Gossypium hirsutum HOM05D007471 ORTHO05D009481 4.2e-23 112.5 250 31.6
Gorai.001G223900 Gossypium raimondii HOM05D007471 ORTHO05D009481 1.2e-22 110.9 250 31.6
Gohir.A07G193500 Gossypium hirsutum HOM05D007471 ORTHO05D009481 7.8e-22 108.2 250 30.8
COL.COLO4_19658 Corchorus olitorius HOM05D007471 ORTHO05D009481 6.9e-18 95.1 175 34.9
SEGI_00651 Sequoiadendron giganteum HOM05D007471 ORTHO05D009481 4.5e-17 92.4 245 26.9
SGA_v2.0_scaffold73G24486 Striga asiatica HOM05D007471 ORTHO05D009481 6.4e-16 88.6 241 30.3
MBI14_g39587_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 7.1e-15 85.1 210 29.5
Peaxi162Scf00289g00310 Petunia axillaris HOM05D007471 ORTHO05D009481 5.1e-13 79.0 92 43.5
SHI10184 Sapria himalayana HOM05D007471 ORTHO05D009481 1.9e-12 77.0 164 32.9
ClCG02G003080 Citrullus lanatus HOM05D007471 ORTHO05D009481 2.5e-12 76.6 77 48.1
FAN05G5088 Fragaria x ananassa HOM05D000100 ORTHO05D000052 1.2e-09 67.8 68 50.0
Ah.10g032600 Amaranthus hybridus HOM05D007471 ORTHO05D009481 1.9e-07 60.5 66 43.9


User provided reference genes

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