Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G214800 Phaseolus vulgaris HOM05D007471 ORTHO05D009481 1.0e-134 483.4 241 100.0
VMungo1309G3041 Vigna mungo HOM05D007471 ORTHO05D009481 3.7e-121 438.3 241 90.0
Phvul.009G215100 Phaseolus vulgaris HOM05D007471 ORTHO05D009481 3.4e-114 415.2 241 88.8
Glyma.15G195100 Glycine max HOM05D007471 ORTHO05D009481 6.6e-110 401.0 242 84.3
Glyma.09G086000 Glycine max HOM05D007471 ORTHO05D009481 5.2e-107 391.3 242 82.6
Lj6g0025127 Lotus japonicus HOM05D007471 ORTHO05D009481 1.4e-96 356.7 243 73.7
Psat1g019920 Pisum sativum HOM05D007471 ORTHO05D009481 6.0e-95 351.3 243 73.7
Lalb_Chr10g0094201 Lupinus albus HOM05D007471 ORTHO05D009481 4.0e-91 338.6 242 71.1
Medtr2g049140 Medicago truncatula HOM05D007471 ORTHO05D009481 1.9e-88 329.7 242 71.5
Ca_02565_v3 Cicer arietinum L. HOM05D007471 ORTHO05D009481 3.9e-78 295.4 220 70.9
TPR.G20279 Trifolium pratense HOM05D007471 ORTHO05D009481 8.4e-65 251.1 213 65.7
Ciclev10016450m.g Citrus clementina HOM05D007471 ORTHO05D009481 7.1e-64 248.1 243 50.2
QL04p066931 Quercus lobata HOM05D007471 ORTHO05D009481 7.1e-64 248.1 242 52.5
Dinv05327 Davidia involucrata HOM05D007471 ORTHO05D009481 4.8e-60 235.3 244 49.2
MD17G1121200 Malus domestica HOM05D007471 ORTHO05D009481 8.1e-60 234.6 242 50.0
MD17G1122600 Malus domestica HOM05D007471 ORTHO05D009481 5.3e-59 231.9 242 49.6
Manes.12G067200 Manihot esculenta HOM05D007471 ORTHO05D009481 6.9e-59 231.5 243 47.7
Cpa.g.sc136.59 Carica papaya HOM05D007471 ORTHO05D009481 1.2e-58 230.7 243 46.9
RcHm_v2.0_Chr2g0155251 Rosa chinensis HOM05D007471 ORTHO05D009481 1.2e-58 230.7 242 49.2
TPR.G28406 Trifolium pratense HOM05D007471 ORTHO05D009481 1.5e-58 230.3 201 63.2
TAR626G0037 Trochodendron aralioides HOM05D007471 ORTHO05D009481 1.5e-58 230.3 243 46.5
Haze_12583 Corylus avellana HOM05D007471 ORTHO05D009481 7.6e-58 228.0 241 53.1
Sed0023252 Sechium edule HOM05D007471 ORTHO05D009481 3.8e-57 225.7 244 45.9
FvH4_6g40230 Fragaria vesca HOM05D007471 ORTHO05D009481 1.4e-56 223.8 242 47.9
Actinidia12353 Actinidia chinensis HOM05D007471 ORTHO05D009481 1.9e-56 223.4 243 46.5
Eucgr.K01386 Eucalyptus grandis HOM05D007471 ORTHO05D009481 1.9e-56 223.4 244 48.0
FAN14G4986 Fragaria x ananassa HOM05D007471 ORTHO05D009481 5.5e-56 221.9 242 47.9
TWI36G0936 Tripterygium wilfordii HOM05D007471 ORTHO05D009481 7.1e-56 221.5 242 49.2
MELO3C024177.2 Cucumis melo HOM05D007471 ORTHO05D009481 2.7e-55 219.5 247 43.7
CSS0003771 Camellia sinensis var. sinensis HOM05D007471 ORTHO05D009481 3.5e-55 219.2 244 46.3
FAN05G3962 Fragaria x ananassa HOM05D007471 ORTHO05D009481 1.8e-54 216.9 242 47.1
FAN09G1454 Fragaria x ananassa HOM05D007471 ORTHO05D009481 1.8e-54 216.9 242 46.7
CsaV3_7G002330 Cucumis sativus L. HOM05D007471 ORTHO05D009481 6.7e-54 214.9 247 42.5
PGR044G0015 Punica granatum HOM05D007471 ORTHO05D009481 8.7e-54 214.5 242 45.0
Rhsim06G0179200 Rhododendron simsii HOM05D000358 ORTHO05D001562 8.7e-54 214.5 241 45.6
Hma1.2p1_0599F.1_g186930 Hydrangea macrophylla HOM05D007471 ORTHO05D009481 7.4e-53 211.5 244 46.3
Lj8A138T38 Lonicera japonica HOM05D007471 ORTHO05D009481 1.3e-52 210.7 244 45.9
GSVIVG01030129001 Vitis vinifera HOM05D007471 ORTHO05D009481 1.3e-52 210.7 242 47.9
Cc05_g01930 Coffea canephora HOM05D007471 ORTHO05D009481 9.0e-51 204.5 246 46.3
Nitab4.5_0003086g0070 Nicotiana tabacum HOM05D007471 ORTHO05D009481 1.2e-50 204.1 244 44.3
BcaB03g14688 Brassica carinata HOM05D007471 ORTHO05D009481 2.6e-50 203.0 242 41.7
AL3G19000 Arabidopsis lyrata HOM05D007471 ORTHO05D009481 5.8e-50 201.8 242 42.1
Sp3g06580 Schrenkiella parvula HOM05D007471 ORTHO05D009481 1.3e-49 200.7 242 41.3
MSTRG.6626 Avicennia marina HOM05D007471 ORTHO05D009481 1.7e-49 200.3 242 45.5
CARHR082340 Cardamine hirsuta HOM05D007471 ORTHO05D009481 2.9e-49 199.5 242 41.7
HanXRQChr09g0257421 Helianthus annuus HOM05D007471 ORTHO05D009481 2.9e-49 199.5 244 46.7
Migut.M00062 Erythranthe guttata HOM05D007471 ORTHO05D009481 3.8e-49 199.1 243 44.0
AT3G07640 Arabidopsis thaliana HOM05D007471 ORTHO05D009481 4.9e-49 198.7 242 40.9
SalBow7G1274 Salvia bowleyana HOM05D007471 ORTHO05D009481 4.9e-49 198.7 243 46.1
THA.LOC104819026 Tarenaya hassleriana HOM05D007471 ORTHO05D009481 6.5e-49 198.4 244 42.2
Solyc07g045150.3 Solanum lycopersicum HOM05D007471 ORTHO05D009481 1.1e-48 197.6 244 43.4
Lsat_1_v5_gn_9_102921 Lactuca sativa HOM05D007471 ORTHO05D009481 1.4e-48 197.2 243 44.9
Sopen07g023700 Solanum pennellii HOM05D007471 ORTHO05D009481 1.4e-48 197.2 244 43.4
Nn1g07565 Nelumbo nucifera HOM05D007471 ORTHO05D009481 1.9e-48 196.8 243 41.6
PSO210G0038 Papaver somniferum HOM05D007471 ORTHO05D009481 2.5e-48 196.4 243 41.6
BcaC01g04271 Brassica carinata HOM05D007471 ORTHO05D009481 3.2e-48 196.1 242 43.0
C03p43000 Brassica napus HOM05D007471 ORTHO05D009481 3.2e-48 196.1 242 43.0
PSO210G4841 Papaver somniferum HOM05D007471 ORTHO05D009481 7.1e-48 194.9 245 41.6
Carub.0003s0722 Capsella rubella HOM05D007471 ORTHO05D009481 2.7e-47 193.0 244 40.6
ATR0751G158 Amborella trichopoda HOM05D007471 ORTHO05D009481 3.5e-47 192.6 242 42.6
BolC3t16568H Brassica oleracea HOM05D007471 ORTHO05D009481 3.5e-47 192.6 242 41.7
PGSC0003DMG402017414 Solanum tuberosum HOM05D007471 ORTHO05D009481 3.5e-47 192.6 244 42.6
A03p35390 Brassica napus HOM05D007471 ORTHO05D009481 4.6e-47 192.2 242 41.3
BraA03t12717Z Brassica rapa HOM05D007471 ORTHO05D009481 4.6e-47 192.2 242 41.3
Peaxi162Scf00359g00320 Petunia axillaris HOM05D007471 ORTHO05D009481 7.9e-47 191.4 242 40.5
Sc21g0000400 Simmondsia chinensis HOM05D007471 ORTHO05D009481 1.0e-46 191.0 245 41.2
Cfa014199 Carpinus fangiana HOM05D005171 ORTHO05D006343 1.8e-46 190.3 237 46.4
ClCG02G003070 Citrullus lanatus HOM05D007471 ORTHO05D009481 5.1e-46 188.7 292 35.6
MBI14_g27042_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 5.1e-46 188.7 232 44.0
Thhalv10021420m.g Eutrema salsugineum HOM05D007471 ORTHO05D009481 1.5e-45 187.2 242 38.8
Aa31LG5G18220 Aethionema arabicum HOM05D007471 ORTHO05D009481 9.6e-45 184.5 265 38.9
Atru.BG.43.p Acer truncatum HOM05D007471 ORTHO05D009481 6.3e-44 181.8 189 51.9
ECA240G3131 Erigeron canadensis HOM05D001349 ORTHO05D001980 3.1e-43 179.5 242 42.1
CAN.G826.3 Capsicum annuum HOM05D007471 ORTHO05D009481 4.5e-42 175.6 243 39.5
vmacro12060 Vaccinium macrocarpon HOM05D007471 ORTHO05D009481 4.5e-42 175.6 201 48.3
Oeu000672.1 Olea europaea HOM05D007471 ORTHO05D009481 2.1e-39 166.8 197 44.7
AUR62037766 Chenopodium quinoa HOM05D007471 ORTHO05D009481 3.6e-39 166.0 242 36.0
AUR62018237 Chenopodium quinoa HOM05D007471 ORTHO05D009481 1.0e-38 164.5 242 37.2
Prupe.3G192700 Prunus persica HOM05D007471 ORTHO05D009481 2.3e-38 163.3 174 46.6
DCAR_019662 Daucus carota HOM05D007471 ORTHO05D009481 1.1e-37 161.0 215 43.3
Thecc.01G199800 Theobroma cacao HOM05D007471 ORTHO05D009481 2.4e-35 153.3 248 38.3
FAN02G2672 Fragaria x ananassa HOM05D007471 ORTHO05D009481 2.0e-34 150.2 242 37.2
BcaB03g14686 Brassica carinata HOM05D007471 ORTHO05D009481 1.3e-33 147.5 212 37.3
CSS0004770 Camellia sinensis var. sinensis HOM05D007471 ORTHO05D009481 3.8e-33 146.0 169 44.4
Duzib133G1025 Durio zibethinus HOM05D007471 ORTHO05D009481 1.1e-32 144.4 248 36.7
CDE11G0370 Ceratophyllum demersum HOM05D007471 ORTHO05D009481 2.7e-31 139.8 253 36.4
Gohir.D07G199700 Gossypium hirsutum HOM05D007471 ORTHO05D009481 4.6e-31 139.0 250 35.2
Os02g0582400 Oryza sativa ssp. japonica HOM05D007471 ORTHO05D009481 7.9e-31 138.3 241 34.4
Zm00001eb245410 Zea mays HOM05D007471 ORTHO05D009481 1.0e-30 137.9 243 35.0
Gorai.001G223900 Gossypium raimondii HOM05D007471 ORTHO05D009481 1.4e-30 137.5 250 35.2
THA.LOC104822442 Tarenaya hassleriana HOM05D007471 ORTHO05D009481 1.4e-30 137.5 246 33.7
Gohir.A07G193500 Gossypium hirsutum HOM05D007471 ORTHO05D009481 8.8e-30 134.8 250 34.4
COL.COLO4_19658 Corchorus olitorius HOM05D007471 ORTHO05D009481 9.1e-27 124.8 175 41.1
SGA_v2.0_scaffold73G24486 Striga asiatica HOM05D007471 ORTHO05D009481 2.5e-24 116.7 241 33.6
SEGI_00651 Sequoiadendron giganteum HOM05D007471 ORTHO05D009481 3.6e-23 112.8 245 29.4
MBI14_g39587_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 5.2e-22 109.0 237 31.6
SHI10184 Sapria himalayana HOM05D007471 ORTHO05D009481 1.3e-20 104.4 165 35.8
Peaxi162Scf00289g00310 Petunia axillaris HOM05D007471 ORTHO05D009481 2.0e-13 80.5 92 44.6
ClCG02G003080 Citrullus lanatus HOM05D007471 ORTHO05D009481 2.8e-12 76.6 77 48.1
FAN05G5088 Fragaria x ananassa HOM05D000100 ORTHO05D000052 1.3e-09 67.8 68 50.0
Ah.10g032600 Amaranthus hybridus HOM05D007471 ORTHO05D009481 2.1e-07 60.5 66 43.9
Lsat_1_v5_gn_3_93600 Lactuca sativa HOM05D007471 ORTHO05D233800 8.8e-06 55.1 86 36.0


User provided reference genes

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