Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G214600 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 3.4e-170 601.7 328 100.0
VMungo1309G2255 Vigna mungo HOM05D009013 ORTHO05D009761 4.9e-140 501.5 328 86.6
Glyma.09G085700 Glycine max HOM05D009013 ORTHO05D009761 4.3e-120 435.3 340 75.9
Glyma.15G195700 Glycine max HOM05D009013 ORTHO05D009761 8.1e-103 377.9 344 68.0
Lj6g0000102 Lotus japonicus HOM05D009013 ORTHO05D009761 9.7e-64 248.1 359 51.5
Lalb_Chr07g0186121 Lupinus albus HOM05D009013 ORTHO05D009761 6.1e-58 228.8 343 50.7
Lalb_Chr12g0204801 Lupinus albus HOM05D009013 ORTHO05D009761 1.3e-55 221.1 341 47.5
Lj4g0005206 Lotus japonicus HOM05D009013 ORTHO05D009761 2.6e-53 213.4 346 49.1
Glyma.08G121600 Glycine max HOM05D009013 ORTHO05D009761 5.2e-49 199.1 339 47.2
Glyma.05G164200 Glycine max HOM05D009013 ORTHO05D009761 1.7e-47 194.1 332 44.3
Lalb_Chr23g0275971 Lupinus albus HOM05D009013 ORTHO05D009761 2.2e-47 193.7 340 42.9
Lalb_Chr08g0233301 Lupinus albus HOM05D009013 ORTHO05D009761 4.8e-47 192.6 328 43.9
Medtr2g049330 Medicago truncatula HOM05D009013 ORTHO05D009761 2.6e-45 186.8 301 45.5
TPR.G22001 Trifolium pratense HOM05D009013 ORTHO05D009761 1.7e-44 184.1 307 46.3
Lalb_Chr13g0295461 Lupinus albus HOM05D009013 ORTHO05D009761 2.2e-44 183.7 339 44.0
VMungo0251G0903 Vigna mungo HOM05D009013 ORTHO05D009761 8.0e-42 175.3 337 44.5
arahy.Tifrunner.gnm1.ann1.5V604V Arachis hypogaea HOM05D009013 ORTHO05D009761 5.2e-41 172.6 337 44.8
Phvul.002G244200 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 5.2e-41 172.6 335 42.1
Psat1g020440 Pisum sativum HOM05D009013 ORTHO05D009761 2.0e-40 170.6 480 35.4
arahy.Tifrunner.gnm1.ann1.3YWF5K Arachis hypogaea HOM05D009013 ORTHO05D009761 5.0e-36 156.0 336 42.6
CiPaw.10G096600 Carya illinoinensis HOM05D009013 ORTHO05D009761 4.4e-32 142.9 363 38.8
TPR.G31355 Trifolium pratense HOM05D009013 ORTHO05D009761 1.3e-31 141.4 341 41.1
Psat1g018200 Pisum sativum HOM05D009013 ORTHO05D009761 1.2e-29 134.8 335 37.0
Haze_05479 Corylus avellana HOM05D009013 ORTHO05D009761 2.0e-29 134.0 367 37.6
Medtr6g068870 Medicago truncatula HOM05D009013 ORTHO05D009761 3.5e-29 133.3 325 37.2
Dinv03635 Davidia involucrata HOM05D009013 ORTHO05D009761 4.2e-27 126.3 379 35.6
QL05p060720 Quercus lobata HOM05D009013 ORTHO05D009761 6.1e-26 122.5 377 34.7
Cfa001036 Carpinus fangiana HOM05D009013 ORTHO05D009761 5.2e-25 119.4 364 36.0
Ca_25278_v3 Cicer arietinum L. HOM05D009013 ORTHO05D009761 1.4e-22 111.3 339 34.2
CiPaw.09G129900 Carya illinoinensis HOM05D009013 ORTHO05D009761 6.6e-20 102.4 531 27.3
Potri.011G077700 Populus trichocarpa HOM05D009852 ORTHO05D009761 7.3e-19 99.0 374 31.8
Glyma.13G051300 Glycine max HOM05D009013 ORTHO05D009761 9.5e-19 98.6 53 84.9
Ciclev10017480m.g Citrus clementina HOM05D009852 ORTHO05D009761 1.6e-18 97.8 340 34.1
DCAR_003953 Daucus carota HOM05D009013 ORTHO05D009761 2.1e-18 97.4 372 30.1
Prupe.4G073200 Prunus persica HOM05D014736 ORTHO05D009761 6.1e-18 95.9 348 34.5
TWI73G0525 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 4.4e-16 89.7 364 30.8
Atru.chr10.1414 Acer truncatum HOM05D009852 ORTHO05D009761 2.9e-15 87.0 320 33.1
Manes.15G116600 Manihot esculenta HOM05D009852 ORTHO05D009761 1.8e-14 84.3 393 32.1
CANSAT35G0309 Cannabis sativa HOM05D009013 ORTHO05D009761 4.1e-14 83.2 333 34.2
Hma1.2p1_0015F.1_g010420 Hydrangea macrophylla HOM05D009013 ORTHO05D009761 2.3e-12 77.4 331 29.9
MD10G1268000 Malus domestica HOM05D014736 ORTHO05D009761 2.3e-12 77.4 262 30.2
Thecc.06G158200 Theobroma cacao HOM05D009852 ORTHO05D009761 2.3e-12 77.4 342 32.5
Gohir.D05G154000 Gossypium hirsutum HOM05D009852 ORTHO05D009761 3.9e-12 76.6 343 31.5
Manes.17G064400 Manihot esculenta HOM05D009852 ORTHO05D009761 3.9e-12 76.6 401 29.7
Oeu021526.1 Olea europaea HOM05D012266 ORTHO05D011876 6.6e-12 75.9 365 30.4
Gorai.009G158300 Gossypium raimondii HOM05D009852 ORTHO05D009761 8.6e-12 75.5 343 31.5
TWI09G0214 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 4.3e-11 73.2 369 28.7
TWI09G1113 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 4.3e-11 73.2 369 28.7
MELO3C007172.2 Cucumis melo HOM05D022667 ORTHO05D009761 7.3e-11 72.4 334 29.6
CSS0045433 Camellia sinensis var. sinensis HOM05D014645 ORTHO05D009761 9.5e-11 72.0 471 25.3
CsaV3_6G051330 Cucumis sativus L. HOM05D022667 ORTHO05D009761 1.2e-10 71.6 328 29.6
Rhsim02G0193600 Rhododendron simsii HOM05D014645 ORTHO05D009761 1.2e-10 71.6 377 29.2
Gorai.010G164100 Gossypium raimondii HOM05D009852 ORTHO05D009761 4.7e-10 69.7 336 32.4
Sed0023686 Sechium edule HOM05D022667 ORTHO05D009761 6.2e-10 69.3 328 27.4
Oeu046855.1 Olea europaea HOM05D012266 ORTHO05D011876 1.0e-09 68.6 369 30.1
DCAR_007913 Daucus carota HOM05D009013 ORTHO05D009761 2.3e-09 67.4 304 26.3
Gohir.D06G140600 Gossypium hirsutum HOM05D009852 ORTHO05D009761 4.0e-09 66.6 336 32.1
Potri.001G354600 Populus trichocarpa HOM05D009852 ORTHO05D009761 4.0e-09 66.6 357 31.7
arahy.Tifrunner.gnm1.ann1.KKL43J Arachis hypogaea HOM05D051477 ORTHO05D009761 6.8e-09 65.9 136 36.0
arahy.Tifrunner.gnm1.ann1.KTB3LS Arachis hypogaea HOM05D051477 ORTHO05D009761 6.8e-09 65.9 136 36.0
MD05G1292200 Malus domestica HOM05D014736 ORTHO05D009761 1.2e-08 65.1 229 29.7
Gohir.D10G032500 Gossypium hirsutum HOM05D009852 ORTHO05D009761 1.5e-08 64.7 89 43.8
Gorai.011G034400 Gossypium raimondii HOM05D009852 ORTHO05D009761 1.5e-08 64.7 89 43.8
Sed0006555 Sechium edule HOM05D022667 ORTHO05D009761 1.5e-08 64.7 341 28.4
BcaC02g11497 Brassica carinata HOM05D008719 ORTHO05D010898 2.6e-08 63.9 95 42.1
ClCG01G024180 Citrullus lanatus HOM05D022667 ORTHO05D009761 2.6e-08 63.9 331 27.2
Duzib160G0535 Durio zibethinus HOM05D009852 ORTHO05D009761 2.6e-08 63.9 355 31.5
Gohir.A05G151600 Gossypium hirsutum HOM05D009852 ORTHO05D009761 2.6e-08 63.9 342 31.9
FAN11G2258 Fragaria x ananassa HOM05D014736 ORTHO05D009761 4.4e-08 63.2 76 43.4
FvH4_3g06440 Fragaria vesca HOM05D014736 ORTHO05D009761 7.5e-08 62.4 76 43.4
BolC4t27834H Brassica oleracea HOM05D008719 ORTHO05D010898 6.4e-07 59.3 70 48.6
Actinidia07666 Actinidia chinensis HOM05D014645 ORTHO05D009761 8.3e-07 58.9 115 39.1
C04p14710 Brassica napus HOM05D008719 ORTHO05D010898 8.3e-07 58.9 126 37.3
COL.COLO4_22804 Corchorus olitorius HOM05D009852 ORTHO05D009761 8.3e-07 58.9 308 31.2
PSO675G7770 Papaver somniferum HOM05D022831 ORTHO05D023597 1.4e-06 58.2 76 43.4
Duzib192G0106 Durio zibethinus HOM05D009852 ORTHO05D009761 1.9e-06 57.8 348 31.6
Thhalv10017155m.g Eutrema salsugineum HOM05D008719 ORTHO05D010898 1.9e-06 57.8 328 28.7
RcHm_v2.0_Chr5g0012861 Rosa chinensis HOM05D014736 ORTHO05D009761 1.9e-06 57.8 47 55.3
SalBow8G3146 Salvia bowleyana HOM05D012266 ORTHO05D011876 1.9e-06 57.8 340 28.5
Duzib235G1088 Durio zibethinus HOM05D009852 ORTHO05D009761 2.4e-06 57.4 407 29.7
AT1G29530 Arabidopsis thaliana HOM05D008719 ORTHO05D010898 7.0e-06 55.8 332 28.6
AUR62035804 Chenopodium quinoa HOM05D018558 ORTHO05D018254 7.0e-06 55.8 337 28.2
AL4G30240 Arabidopsis lyrata HOM05D008719 ORTHO05D010898 9.2e-06 55.5 93 37.6
CSS0047309 Camellia sinensis var. sinensis HOM05D014645 ORTHO05D009761 9.2e-06 55.5 440 25.9
PSO541G1916 Papaver somniferum HOM05D022831 ORTHO05D023597 9.2e-06 55.5 76 42.1


User provided reference genes

Program Settings