Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G208700 Phaseolus vulgaris HOM05D001921 ORTHO05D001784 7.8e-56 220.3 118 100.0
VMungo1309G0884 Vigna mungo HOM05D001921 ORTHO05D001784 5.4e-41 171.0 116 84.5
Glyma.15G203400 Glycine max HOM05D001921 ORTHO05D001784 1.6e-37 159.5 117 78.6
Glyma.09G097200 Glycine max HOM05D001921 ORTHO05D001784 8.9e-36 153.7 125 73.6
Psat1g022640 Pisum sativum HOM05D001921 ORTHO05D001784 6.7e-15 84.3 146 41.1
Psat4g034000 Pisum sativum HOM05D001921 ORTHO05D001784 4.3e-14 81.6 138 47.8
Lalb_Chr07g0179601 Lupinus albus HOM05D001921 ORTHO05D001784 2.1e-13 79.3 136 44.9
Cfa020875 Carpinus fangiana HOM05D001921 ORTHO05D001784 4.8e-13 78.2 122 45.1
Ca_03892_v3 Cicer arietinum L. HOM05D001921 ORTHO05D001784 6.2e-13 77.8 112 47.3
Medtr2g461300 Medicago truncatula HOM05D001921 ORTHO05D001784 6.2e-13 77.8 147 40.1
Haze_19306 Corylus avellana HOM05D001921 ORTHO05D001784 1.8e-12 76.3 119 46.2
Lalb_Chr11g0072831 Lupinus albus HOM05D001921 ORTHO05D001784 1.8e-12 76.3 133 46.6
Glyma.17G104300 Glycine max HOM05D001921 ORTHO05D001784 3.1e-12 75.5 164 39.0
Lj4g0015946 Lotus japonicus HOM05D001921 ORTHO05D001784 4.0e-12 75.1 143 39.9
Phvul.003G175500 Phaseolus vulgaris HOM05D001921 ORTHO05D001784 4.0e-12 75.1 164 40.2
Gohir.D06G095900 Gossypium hirsutum HOM05D001921 ORTHO05D001784 6.9e-12 74.3 147 40.8
Gorai.010G110500 Gossypium raimondii HOM05D001921 ORTHO05D001784 9.0e-12 73.9 110 46.4
Ca_21607_v3 Cicer arietinum L. HOM05D001921 ORTHO05D001784 2.6e-11 72.4 180 37.8
TPR.G15777 Trifolium pratense HOM05D001921 ORTHO05D001784 4.5e-11 71.6 170 38.2
Glyma.13G156700 Glycine max HOM05D001921 ORTHO05D001784 9.9e-11 70.5 168 35.1
Lj6g0019201 Lotus japonicus HOM05D001921 ORTHO05D001784 9.9e-11 70.5 65 58.5
Medtr4g116830 Medicago truncatula HOM05D001921 ORTHO05D001784 9.9e-11 70.5 172 37.8
Duzib187G0406 Durio zibethinus HOM05D001921 ORTHO05D001784 1.7e-10 69.7 127 41.7
COL.COLO4_18732 Corchorus olitorius HOM05D001921 ORTHO05D001784 2.2e-10 69.3 128 43.0
Gohir.A06G095800 Gossypium hirsutum HOM05D001921 ORTHO05D001784 4.9e-10 68.2 147 38.8
VMungo1215G2840 Vigna mungo HOM05D001921 ORTHO05D001784 6.4e-10 67.8 163 38.0
Thecc.09G037400 Theobroma cacao HOM05D001921 ORTHO05D001784 8.4e-10 67.4 127 43.3
Hma1.2p1_0028F.1_g017215 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 1.9e-09 66.2 113 50.4
QL02p091546 Quercus lobata HOM05D001921 ORTHO05D001784 2.4e-09 65.9 139 41.0
Dinv03521 Davidia involucrata HOM05D001921 ORTHO05D001784 3.2e-09 65.5 131 43.5
Hma1.2p1_2976F.1_g331170 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 3.2e-09 65.5 113 51.3
Nn8g39748 Nelumbo nucifera HOM05D001921 ORTHO05D001784 3.2e-09 65.5 132 44.7
TPR.G22804 Trifolium pratense HOM05D001921 ORTHO05D001784 3.2e-09 65.5 114 41.2
Cpa.g.sc46.103 Carica papaya HOM05D001921 ORTHO05D001784 4.2e-09 65.1 138 37.7
Thecc.09G018900 Theobroma cacao HOM05D001921 ORTHO05D001784 5.5e-09 64.7 109 42.2
RcHm_v2.0_Chr2g0086511 Rosa chinensis HOM05D001921 ORTHO05D001784 7.1e-09 64.3 147 40.1
Dinv41418 Davidia involucrata HOM05D001921 ORTHO05D001784 9.3e-09 63.9 110 40.0
Prupe.7G253300 Prunus persica HOM05D001921 ORTHO05D001784 9.3e-09 63.9 97 45.4
Sc14g0000060 Simmondsia chinensis HOM05D001921 ORTHO05D001784 1.2e-08 63.5 105 42.9
Duzib187G0974 Durio zibethinus HOM05D001921 ORTHO05D001784 1.6e-08 63.2 56 58.9
FAN23G0500 Fragaria x ananassa HOM05D001921 ORTHO05D001784 1.6e-08 63.2 136 40.4
FAN26G0252 Fragaria x ananassa HOM05D001921 ORTHO05D001784 1.6e-08 63.2 137 40.1
MD02G1012300 Malus domestica HOM05D001921 ORTHO05D001784 1.6e-08 63.2 147 38.1
Sed0019454 Sechium edule HOM05D001921 ORTHO05D001784 2.1e-08 62.8 71 54.9
FvH4_1g01550 Fragaria vesca HOM05D001921 ORTHO05D001784 3.5e-08 62.0 138 39.1
Nn2g12262 Nelumbo nucifera HOM05D001921 ORTHO05D001784 4.6e-08 61.6 128 41.4
TWI34G0586 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 4.6e-08 61.6 96 44.8
Dinv42904 Davidia involucrata HOM05D001921 ORTHO05D001784 6.0e-08 61.2 115 38.3
Dinv43197 Davidia involucrata HOM05D001921 ORTHO05D001784 6.0e-08 61.2 115 38.3
EL10Ac6g15007 Beta vulgaris HOM05D001921 ORTHO05D001784 7.9e-08 60.8 146 34.2
MD15G1158100 Malus domestica HOM05D001921 ORTHO05D001784 1.0e-07 60.5 147 37.4
Rhsim03G0253600 Rhododendron simsii HOM05D001921 ORTHO05D001784 1.0e-07 60.5 110 36.4
Dinv03420 Davidia involucrata HOM05D001921 ORTHO05D001784 1.3e-07 60.1 126 36.5
FAN19G1379 Fragaria x ananassa HOM05D001921 ORTHO05D001784 1.8e-07 59.7 138 37.7
CiPaw.15G179300 Carya illinoinensis HOM05D001921 ORTHO05D001784 3.0e-07 58.9 98 38.8
CSS0005509 Camellia sinensis var. sinensis HOM05D001921 ORTHO05D001784 3.9e-07 58.5 118 40.7
FAN28G2602 Fragaria x ananassa HOM05D001921 ORTHO05D001784 3.9e-07 58.5 133 38.3
COL.COLO4_18922 Corchorus olitorius HOM05D001921 ORTHO05D001784 5.1e-07 58.2 111 41.4
Gohir.A06G095900 Gossypium hirsutum HOM05D001921 ORTHO05D001784 1.1e-06 57.0 62 56.5
Gohir.D06G096000 Gossypium hirsutum HOM05D001921 ORTHO05D001784 1.1e-06 57.0 62 54.8
Gohir.D06G102300 Gossypium hirsutum HOM05D001921 ORTHO05D001784 1.1e-06 57.0 109 38.5
Gohir.A06G100200 Gossypium hirsutum HOM05D001921 ORTHO05D001784 1.5e-06 56.6 109 39.4
Manes.16G126400 Manihot esculenta HOM05D001921 ORTHO05D001784 1.5e-06 56.6 117 39.3
CANSAT11G0699 Cannabis sativa HOM05D001921 ORTHO05D001784 1.9e-06 56.2 148 38.5
ClCG11G003650 Citrullus lanatus HOM05D001921 ORTHO05D001784 1.9e-06 56.2 110 38.2
Gohir.D07G034600 Gossypium hirsutum HOM05D001921 ORTHO05D001784 1.9e-06 56.2 119 37.0
Gorai.010G110700 Gossypium raimondii HOM05D001921 ORTHO05D001784 1.9e-06 56.2 62 53.2
Gorai.010G117300 Gossypium raimondii HOM05D001921 ORTHO05D001784 1.9e-06 56.2 109 39.4
Manes.06G040800 Manihot esculenta HOM05D001921 ORTHO05D001784 1.9e-06 56.2 76 46.1
CAN.G1045.40 Capsicum annuum HOM05D001921 ORTHO05D001784 3.3e-06 55.5 110 38.2
CiPaw.07G227300 Carya illinoinensis HOM05D001921 ORTHO05D001784 3.3e-06 55.5 113 38.1
DCAR_017895 Daucus carota HOM05D001921 ORTHO05D001784 4.3e-06 55.1 55 54.5
Thhalv10029029m.g Eutrema salsugineum HOM05D001921 ORTHO05D001784 4.3e-06 55.1 86 46.5
Gohir.A07G030700 Gossypium hirsutum HOM05D001921 ORTHO05D001784 4.3e-06 55.1 55 54.5
Haze_21460 Corylus avellana HOM05D001921 ORTHO05D001784 5.6e-06 54.7 66 50.0
PGR102G2943 Punica granatum HOM05D001921 ORTHO05D001784 5.6e-06 54.7 56 58.9
Sed0017709 Sechium edule HOM05D001921 ORTHO05D001784 7.4e-06 54.3 77 45.5
Actinidia38704 Actinidia chinensis HOM05D001921 ORTHO05D001784 9.6e-06 53.9 114 34.2
Haze_21461 Corylus avellana HOM05D001921 ORTHO05D001784 9.6e-06 53.9 52 53.8
TAR625G0682 Trochodendron aralioides HOM05D001921 ORTHO05D001784 9.6e-06 53.9 125 39.2


User provided reference genes

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