Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G202100 Phaseolus vulgaris HOM05D007161 ORTHO05D009103 4.6e-77 291.6 199 100.0
Glyma.04G161600 Glycine max HOM05D007161 ORTHO05D009103 2.7e-61 239.2 200 88.0
Glyma.06G204200 Glycine max HOM05D007161 ORTHO05D009103 1.2e-56 223.8 201 85.1
arahy.Tifrunner.gnm1.ann1.KM320G Arachis hypogaea HOM05D007161 ORTHO05D009103 1.8e-52 209.9 199 78.4
arahy.Tifrunner.gnm1.ann1.N0KAAL Arachis hypogaea HOM05D007161 ORTHO05D009103 1.1e-51 207.2 199 77.4
Ca_14363_v3 Cicer arietinum L. HOM05D007161 ORTHO05D009103 2.5e-46 189.5 199 75.4
Psat5g207080 Pisum sativum HOM05D007161 ORTHO05D009103 8.0e-45 184.5 200 76.0
Medtr3g026020 Medicago truncatula HOM05D007161 ORTHO05D009103 7.0e-41 171.4 199 73.4
TPR.G12153 Trifolium pratense HOM05D007161 ORTHO05D009103 7.7e-40 167.9 202 73.8
Dinv22772 Davidia involucrata HOM05D007161 ORTHO05D009103 1.3e-39 167.2 191 70.7
Haze_07737 Corylus avellana HOM05D007161 ORTHO05D009103 1.9e-38 163.3 167 78.4
Gohir.A07G068000 Gossypium hirsutum HOM05D007161 ORTHO05D009103 1.9e-38 163.3 203 71.4
Thecc.03G103000 Theobroma cacao HOM05D007161 ORTHO05D009103 1.9e-38 163.3 199 73.4
Gohir.D07G072600 Gossypium hirsutum HOM05D007161 ORTHO05D009103 2.5e-38 162.9 203 71.4
Ciclev10022373m.g Citrus clementina HOM05D007161 ORTHO05D009103 9.4e-38 161.0 174 73.0
Cfa019345 Carpinus fangiana HOM05D007161 ORTHO05D009103 1.6e-37 160.2 167 77.8
Gorai.001G076800 Gossypium raimondii HOM05D007161 ORTHO05D009103 1.6e-37 160.2 203 70.9
QL10p019814 Quercus lobata HOM05D007161 ORTHO05D009103 2.1e-37 159.8 188 72.9
CANSAT56G0131 Cannabis sativa HOM05D007161 ORTHO05D009103 5.2e-36 155.2 172 73.3
Manes.06G083700 Manihot esculenta HOM05D007161 ORTHO05D009103 6.8e-36 154.8 157 80.3
Lj1g0027416 Lotus japonicus HOM05D007161 ORTHO05D009103 1.2e-35 154.1 195 71.8
COL.COLO4_24339 Corchorus olitorius HOM05D007161 ORTHO05D009103 2.2e-34 149.8 158 79.7
Nn4g23440 Nelumbo nucifera HOM05D007161 ORTHO05D009103 5.4e-33 145.2 194 67.0
GSVIVG01008106001 Vitis vinifera HOM05D007161 ORTHO05D009103 7.0e-33 144.8 161 77.0
MSTRG.4482 Avicennia marina HOM05D007161 ORTHO05D009103 2.0e-32 143.3 165 70.3
Nitab4.5_0001485g0090 Nicotiana tabacum HOM05D007161 ORTHO05D009103 2.0e-32 143.3 176 68.2
CsaV3_1G006050 Cucumis sativus L. HOM05D007161 ORTHO05D009103 2.7e-32 142.9 165 74.5
CiPaw.11G054500 Carya illinoinensis HOM05D007161 ORTHO05D009103 1.0e-31 141.0 174 71.8
Sopen03g034090 Solanum pennellii HOM05D007161 ORTHO05D009103 1.7e-31 140.2 175 65.1
Atru.chr9.557 Acer truncatum HOM05D007161 ORTHO05D009103 2.2e-31 139.8 166 73.5
ClCG04G011740 Citrullus lanatus HOM05D007161 ORTHO05D009103 2.2e-31 139.8 192 67.2
MELO3C002036.2 Cucumis melo HOM05D007161 ORTHO05D009103 2.9e-31 139.4 165 73.9
Duzib084G1357 Durio zibethinus HOM05D007161 ORTHO05D009103 3.8e-31 139.0 200 67.5
Potri.015G058600 Populus trichocarpa HOM05D007161 ORTHO05D009103 3.8e-31 139.0 157 77.1
PGSC0003DMG400024633 Solanum tuberosum HOM05D007161 ORTHO05D009103 1.9e-30 136.7 175 65.1
Hund02576 Selenicereus undatus HOM05D007161 ORTHO05D009103 2.5e-30 136.3 165 70.9
THA.LOC104801155 Tarenaya hassleriana HOM05D007161 ORTHO05D009103 4.2e-30 135.6 166 71.7
Sed0004238 Sechium edule HOM05D007161 ORTHO05D009103 5.5e-30 135.2 163 73.0
PGR083G0667 Punica granatum HOM05D007161 ORTHO05D009103 7.2e-30 134.8 172 69.8
Eucgr.B00604 Eucalyptus grandis HOM05D007161 ORTHO05D009103 1.6e-29 133.7 179 69.8
MSTRG.9598 Avicennia marina HOM05D007161 ORTHO05D009103 3.6e-29 132.5 169 70.4
Lalb_Chr12g0199331 Lupinus albus HOM05D007161 ORTHO05D009103 3.6e-29 132.5 197 67.0
Sabra15G0084100 Salix brachista HOM05D007161 ORTHO05D009103 8.0e-29 131.3 194 66.0
TWI81G0640 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 8.0e-29 131.3 161 73.9
Prupe.5G206100 Prunus persica HOM05D007161 ORTHO05D009103 1.0e-28 131.0 166 69.3
Solyc03g115020.3 Solanum lycopersicum HOM05D007161 ORTHO05D009103 3.0e-28 129.4 172 64.5
CAN.G1228.16 Capsicum annuum HOM05D007161 ORTHO05D009103 6.8e-28 128.3 167 65.9
EL10Ac5g11145 Beta vulgaris HOM05D007161 ORTHO05D009103 2.6e-27 126.3 162 71.0
Oeu017188.1 Olea europaea HOM05D007161 ORTHO05D009103 3.4e-27 125.9 143 74.1
TAR629G0203 Trochodendron aralioides HOM05D007161 ORTHO05D009103 7.5e-27 124.8 187 62.6
ATR0177G008 Amborella trichopoda HOM05D007161 ORTHO05D009103 1.3e-26 124.0 191 60.2
TWI60G0438 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 3.7e-26 122.5 159 74.2
MD14G1212800 Malus domestica HOM05D007161 ORTHO05D009103 2.4e-25 119.8 195 60.5
CDE05G0262 Ceratophyllum demersum HOM05D007161 ORTHO05D009103 4.1e-25 119.0 169 68.0
MD06G1225900 Malus domestica HOM05D007161 ORTHO05D009103 4.1e-25 119.0 195 61.0
Cc00_g12110 Coffea canephora HOM05D007161 ORTHO05D009103 1.6e-24 117.1 157 67.5
Peaxi162Scf00201g00331 Petunia axillaris HOM05D007161 ORTHO05D009103 2.0e-24 116.7 169 64.5
Rhsim08G0144900 Rhododendron simsii HOM05D007161 ORTHO05D009103 2.0e-24 116.7 160 69.4
Sc11g0004490 Simmondsia chinensis HOM05D007161 ORTHO05D009103 2.7e-24 116.3 162 64.8
Ah.02g114100 Amaranthus hybridus HOM05D007161 ORTHO05D009103 1.0e-23 114.4 164 65.9
CSS0029825 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 1.7e-23 113.6 139 74.8
RcHm_v2.0_Chr7g0183201 Rosa chinensis HOM05D007161 ORTHO05D009103 2.3e-23 113.2 163 68.1
CSS0009196 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 2.9e-23 112.8 139 74.8
A03p03560 Brassica napus HOM05D007161 ORTHO05D009103 3.3e-22 109.4 163 65.0
BraA03t09706Z Brassica rapa HOM05D007161 ORTHO05D009103 3.3e-22 109.4 163 65.0
Sp6g34900 Schrenkiella parvula HOM05D007161 ORTHO05D009103 3.3e-22 109.4 163 65.0
C03p04010 Brassica napus HOM05D007161 ORTHO05D009103 5.6e-22 108.6 163 65.0
BolC3t12938H Brassica oleracea HOM05D007161 ORTHO05D009103 7.3e-22 108.2 163 65.0
BcaB01g05640 Brassica carinata HOM05D007161 ORTHO05D009103 9.5e-22 107.8 163 65.0
vmacro17616 Vaccinium macrocarpon HOM05D007161 ORTHO05D009103 9.5e-22 107.8 211 56.4
ECA246G0920 Erigeron canadensis HOM05D007161 ORTHO05D009103 1.2e-21 107.5 161 65.2
Lsat_1_v5_gn_5_22381 Lactuca sativa HOM05D007161 ORTHO05D009103 1.2e-21 107.5 161 67.1
BcaB01g05681 Brassica carinata HOM05D007161 ORTHO05D009103 1.6e-21 107.1 164 65.9
Carub.0006s0694 Capsella rubella HOM05D007161 ORTHO05D009103 3.6e-21 105.9 163 65.0
DCAR_011565 Daucus carota HOM05D007161 ORTHO05D009103 3.6e-21 105.9 162 64.8
Actinidia04818 Actinidia chinensis HOM05D007161 ORTHO05D009103 8.0e-21 104.8 156 66.0
Aqoxy3G03679 Aquilegia oxysepala HOM05D007161 ORTHO05D009103 1.4e-20 104.0 182 61.0
Oeu044879.1 Olea europaea HOM05D007161 ORTHO05D009103 3.0e-20 102.8 143 69.9
SalBow7G4182 Salvia bowleyana HOM05D007161 ORTHO05D009103 4.0e-20 102.4 172 59.9
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 5.2e-20 102.1 179 58.7
Thhalv10014904m.g Eutrema salsugineum HOM05D007161 ORTHO05D009103 5.2e-20 102.1 163 63.2
Nitab4.5_0007356g0010 Nicotiana tabacum HOM05D007161 ORTHO05D009103 8.9e-20 101.3 125 76.0
PSO017G0728 Papaver somniferum HOM05D007161 ORTHO05D009103 1.5e-19 100.5 167 64.1
SGA_v2.0_scaffold42G16039 Striga asiatica HOM05D007161 ORTHO05D009103 1.5e-19 100.5 164 63.4
PSO478G3435 Papaver somniferum HOM05D007161 ORTHO05D009103 2.0e-19 100.1 163 64.4
AUR62008547 Chenopodium quinoa HOM05D007161 ORTHO05D009103 2.6e-19 99.8 198 58.1
FvH4_5g13740 Fragaria vesca HOM05D007161 ORTHO05D009103 5.7e-19 98.6 164 64.0
FAN18G1870 Fragaria x ananassa HOM05D007161 ORTHO05D009103 5.7e-19 98.6 117 81.2
AT5G08050 Arabidopsis thaliana HOM05D007161 ORTHO05D009103 7.5e-19 98.2 164 62.8
FAN13G1189 Fragaria x ananassa HOM05D007161 ORTHO05D009103 7.5e-19 98.2 139 71.2
HanXRQChr08g0230491 Helianthus annuus HOM05D007161 ORTHO05D009103 9.8e-19 97.8 161 64.0
FAN08G2338 Fragaria x ananassa HOM05D007161 ORTHO05D009103 2.2e-18 96.7 127 74.8
SEGI_08112 Sequoiadendron giganteum HOM05D007161 ORTHO05D009103 2.9e-18 96.3 165 58.8
AUR62021546 Chenopodium quinoa HOM05D007161 ORTHO05D009103 3.7e-18 95.9 121 74.4
Os12g0575000 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 3.7e-18 95.9 199 55.8
AL6G18400 Arabidopsis lyrata HOM05D007161 ORTHO05D009103 8.3e-18 94.7 164 62.2
CARHR205130 Cardamine hirsuta HOM05D007161 ORTHO05D009103 1.4e-17 94.0 164 59.8
Mapoly0107s0029 Marchantia polymorpha HOM05D007161 ORTHO05D009103 1.8e-17 93.6 148 67.6
Migut.D01637 Erythranthe guttata HOM05D007161 ORTHO05D009103 5.4e-17 92.0 164 60.4
SMO139G0085 Selaginella moellendorffii HOM05D007161 ORTHO05D009103 5.4e-17 92.0 146 61.6
Aa31LG3G18490 Aethionema arabicum HOM05D007161 ORTHO05D009103 1.2e-16 90.9 89 77.5
HanXRQChr17g0550221 Helianthus annuus HOM05D007161 ORTHO05D009103 2.0e-16 90.1 64 73.4
Lj5C102G4 Lonicera japonica HOM05D007161 ORTHO05D009103 2.7e-16 89.7 163 62.0
Zm00001eb029520 Zea mays HOM05D007161 ORTHO05D009103 4.6e-16 89.0 162 58.6
AagrBONN_evm.TU.Sc2ySwM_344.2890 Anthoceros agrestis HOM05D007161 ORTHO05D009103 8.6e-15 84.7 117 73.5
Pp3c1_19210 Physcomitrium patens HOM05D007161 ORTHO05D009103 1.1e-12 77.8 170 52.9
Os11g0460900 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 4.0e-12 75.9 142 40.8
Peaxi162Scf00009g00010 Petunia axillaris HOM05D007161 ORTHO05D009103 3.5e-08 62.8 54 59.3
unitig_0.g5 Utricularia gibba HOM05D000887 ORTHO05D000908 8.6e-07 58.2 118 65.3


User provided reference genes

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