Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 2.2e-51 205.3 102 100.0
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 3.6e-49 198.0 102 96.1
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 3.0e-48 194.9 102 91.2
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 1.5e-47 192.6 103 94.2
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 2.6e-47 191.8 103 93.2
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 1.3e-46 189.5 102 90.2
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 1.3e-46 189.5 102 90.2
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 2.8e-46 188.3 103 91.3
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 6.3e-46 187.2 102 86.3
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 5.9e-44 180.6 102 82.4
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 1.1e-42 176.4 107 76.6
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 2.5e-42 175.3 107 76.6
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 4.2e-42 174.5 101 79.2
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 4.2e-42 174.5 101 79.2
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 4.2e-42 174.5 101 79.2
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 5.5e-42 174.1 107 77.6
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 2.1e-41 172.2 101 78.2
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 2.7e-41 171.8 102 76.5
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 8.0e-41 170.2 102 74.5
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 1.4e-40 169.5 101 79.2
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 1.8e-40 169.1 101 76.2
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 5.2e-40 167.5 101 75.2
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 5.2e-40 167.5 102 73.5
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 5.2e-40 167.5 101 75.2
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 5.2e-40 167.5 101 76.2
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 6.7e-40 167.2 101 75.2
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 2.6e-39 165.2 102 74.5
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 7.5e-39 163.7 105 72.4
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 9.7e-39 163.3 96 76.0
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 9.7e-39 163.3 101 74.3
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 2.8e-38 161.8 97 75.3
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 2.8e-38 161.8 104 74.0
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 8.2e-38 160.2 100 72.0
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 1.1e-37 159.8 101 71.3
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 1.8e-37 159.1 108 71.3
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 1.8e-37 159.1 108 71.3
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 2.4e-37 158.7 81 97.5
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 3.1e-37 158.3 100 74.0
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 3.1e-37 158.3 100 71.0
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 5.3e-37 157.5 107 71.0
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 1.2e-36 156.4 108 67.6
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 1.6e-36 156.0 100 70.0
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 2.0e-36 155.6 102 70.6
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 2.0e-36 155.6 101 69.3
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 2.7e-36 155.2 101 72.3
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 2.7e-36 155.2 107 70.1
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 5.9e-36 154.1 93 75.3
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 5.9e-36 154.1 101 69.3
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 7.7e-36 153.7 97 72.2
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 1.0e-35 153.3 97 71.1
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 1.0e-35 153.3 97 68.0
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 1.3e-35 152.9 96 72.9
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 1.3e-35 152.9 97 69.1
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 1.7e-35 152.5 101 69.3
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 2.2e-35 152.1 96 72.9
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 2.2e-35 152.1 96 72.9
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 2.2e-35 152.1 96 72.9
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 2.2e-35 152.1 101 68.3
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 2.2e-35 152.1 97 69.1
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 2.2e-35 152.1 101 68.3
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 2.2e-35 152.1 110 67.3
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 2.9e-35 151.8 101 68.3
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 2.9e-35 151.8 95 73.7
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 2.9e-35 151.8 93 75.3
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 2.9e-35 151.8 93 72.0
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 3.8e-35 151.4 100 69.0
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 5.0e-35 151.0 93 72.0
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 6.5e-35 150.6 100 69.0
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 1.1e-34 149.8 97 68.0
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 5.5e-34 147.5 103 69.9
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 5.5e-34 147.5 103 69.9
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 7.2e-34 147.1 100 68.0
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 9.4e-34 146.7 103 69.9
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 1.2e-33 146.4 80 90.0
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 1.6e-33 146.0 101 66.3
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 1.6e-33 146.0 98 71.4
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 2.1e-33 145.6 137 54.7
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 3.6e-33 144.8 96 74.0
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 4.7e-33 144.4 145 53.1
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 4.7e-33 144.4 103 68.9
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 4.7e-33 144.4 103 69.9
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 6.1e-33 144.1 96 68.8
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 6.1e-33 144.1 99 68.7
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 8.0e-33 143.7 101 70.3
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 1.4e-32 142.9 96 68.8
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 1.8e-32 142.5 103 68.0
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 1.8e-32 142.5 90 72.2
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 5.2e-32 141.0 95 69.5
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 6.8e-32 140.6 86 74.4
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 4.4e-31 137.9 104 63.5
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 2.8e-30 135.2 96 64.6
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 2.8e-30 135.2 80 80.0
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 3.1e-29 131.7 80 76.2
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 3.1e-29 131.7 80 76.2
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 4.1e-29 131.3 86 74.4
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 1.6e-28 129.4 99 64.6
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 3.5e-28 128.3 88 70.5
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 5.0e-27 124.4 91 62.6
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 8.6e-27 123.6 91 63.7
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 1.1e-26 123.2 95 67.4
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 3.3e-26 121.7 88 63.6
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 3.4e-23 111.7 95 53.7
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 9.8e-23 110.2 82 64.6
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 8.3e-22 107.1 77 66.2
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 1.1e-21 106.7 74 66.2
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 2.4e-21 105.5 87 60.9
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 1.2e-20 103.2 87 52.9
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 2.7e-20 102.1 71 70.4
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 1.9e-18 95.9 56 76.8
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 3.3e-18 95.1 58 72.4
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 3.6e-17 91.7 71 57.7
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 2.3e-16 89.0 55 70.9
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 1.2e-12 76.6 52 65.4
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 1.0e-11 73.6 53 69.8
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 4.3e-10 68.2 53 62.3
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 1.6e-09 66.2 50 62.0


User provided reference genes

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