Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G190900 Phaseolus vulgaris HOM05D008563 ORTHO05D009802 9.0e-75 283.5 142 100.0
VMungo1309G1047 Vigna mungo HOM05D008563 ORTHO05D009802 4.5e-42 174.9 145 71.7
Medtr2g058870 Medicago truncatula HOM05D008563 ORTHO05D009956 7.0e-19 97.8 150 45.3
Glyma.04G157900 Glycine max HOM05D008563 ORTHO05D009956 9.1e-19 97.4 147 51.0
Glyma.06G207600 Glycine max HOM05D008563 ORTHO05D009802 1.6e-18 96.7 148 50.7
Lj1g0007009 Lotus japonicus HOM05D008563 ORTHO05D009802 2.7e-18 95.9 144 45.1
Ca_02709_v3 Cicer arietinum L. HOM05D008563 ORTHO05D009956 1.1e-16 90.5 152 44.1
TPR.G15318 Trifolium pratense HOM05D008563 ORTHO05D009802 1.6e-15 86.7 157 42.0
Psat5g232520 Pisum sativum HOM05D008563 ORTHO05D009802 4.4e-13 78.6 84 56.0
VMungo1215G2057 Vigna mungo HOM05D024738 ORTHO05D009802 4.4e-13 78.6 130 40.0
Duzib084G1352 Durio zibethinus HOM05D008563 ORTHO05D009802 5.7e-13 78.2 148 39.2
TPR.G2004 Trifolium pratense HOM05D008563 ORTHO05D009802 1.7e-12 76.6 129 44.2
Solyc06g069340.1 Solanum lycopersicum HOM05D014920 ORTHO05D009802 2.8e-12 75.9 127 43.3
Phvul.003G181300 Phaseolus vulgaris HOM05D024738 ORTHO05D009802 9.2e-11 70.9 134 38.8
Sopen06g026600 Solanum pennellii HOM05D014920 ORTHO05D009802 2.7e-10 69.3 95 49.5
PGSC0003DMG400025096 Solanum tuberosum HOM05D011353 ORTHO05D009802 7.8e-10 67.8 70 55.7
Thecc.03G112200 Theobroma cacao HOM05D008563 ORTHO05D009802 1.0e-09 67.4 144 35.4
Gorai.008G201100 Gossypium raimondii HOM05D008563 ORTHO05D009802 1.3e-09 67.0 73 57.5
CSS0016849 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 2.3e-09 66.2 139 39.6
Gohir.D12G187700 Gossypium hirsutum HOM05D008563 ORTHO05D009802 2.9e-09 65.9 73 57.5
Sopen05g006040 Solanum pennellii HOM05D011353 ORTHO05D009802 6.6e-09 64.7 70 57.1
CAN.G184.15 Capsicum annuum HOM05D011353 ORTHO05D009802 8.6e-09 64.3 105 40.0
Peaxi162Scf00188g00068 Petunia axillaris HOM05D011353 ORTHO05D009802 1.1e-08 63.9 126 39.7
Solyc05g010270.1 Solanum lycopersicum HOM05D011353 ORTHO05D009802 1.1e-08 63.9 70 57.1
CSS0048960 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 1.5e-08 63.5 139 38.8
TPR.G3280 Trifolium pratense HOM05D008889 ORTHO05D009956 1.5e-08 63.5 125 39.2
Duzib133G1477 Durio zibethinus HOM05D008889 ORTHO05D009956 1.9e-08 63.2 98 37.8
Oeu024138.1 Olea europaea HOM05D011353 ORTHO05D009956 3.3e-08 62.4 69 56.5
PGSC0003DMG400004059 Solanum tuberosum HOM05D014920 ORTHO05D009802 3.3e-08 62.4 139 38.1
Cc11_g11230 Coffea canephora HOM05D011353 ORTHO05D009956 4.3e-08 62.0 152 36.8
Psat4g045520 Pisum sativum HOM05D008563 ORTHO05D009802 4.3e-08 62.0 132 40.9
Sed0012187 Sechium edule HOM05D008563 ORTHO05D009802 5.6e-08 61.6 145 36.6
unitig_21.g20864 Utricularia gibba HOM05D011353 ORTHO05D009956 5.6e-08 61.6 91 46.2
Sed0005169 Sechium edule HOM05D008563 ORTHO05D009802 7.3e-08 61.2 137 36.5
Gohir.D03G099300 Gossypium hirsutum HOM05D008563 ORTHO05D009802 9.5e-08 60.8 152 35.5
Oeu054579.1 Olea europaea HOM05D011353 ORTHO05D009956 1.2e-07 60.5 69 56.5
Phvul.008G023501 Phaseolus vulgaris HOM05D008889 ORTHO05D009956 1.6e-07 60.1 122 40.2
COL.COLO4_28804 Corchorus olitorius HOM05D008563 ORTHO05D009802 3.6e-07 58.9 137 36.5
Gorai.003G104300 Gossypium raimondii HOM05D008563 ORTHO05D009802 4.7e-07 58.5 152 36.2
COL.COLO4_27749 Corchorus olitorius HOM05D018013 ORTHO05D013371 1.0e-06 57.4 152 36.2
A07p12790 Brassica napus HOM05D008861 ORTHO05D011066 1.4e-06 57.0 138 36.2
BraA07t29056Z Brassica rapa HOM05D008861 ORTHO05D011066 1.4e-06 57.0 138 36.2
Migut.E00267 Erythranthe guttata HOM05D011353 ORTHO05D009956 1.4e-06 57.0 128 35.2
DCAR_011590 Daucus carota HOM05D065511 ORTHO05D009802 1.8e-06 56.6 134 38.8
Medtr7g017790 Medicago truncatula HOM05D008889 ORTHO05D009956 1.8e-06 56.6 121 38.0
RcHm_v2.0_Chr7g0184051 Rosa chinensis HOM05D021981 ORTHO05D009802 1.8e-06 56.6 147 34.0
unitig_744.g24288 Utricularia gibba HOM05D009227 ORTHO05D009956 1.8e-06 56.6 89 44.9
Actinidia35060 Actinidia chinensis HOM05D014692 ORTHO05D014734 2.3e-06 56.2 75 48.0
CiPaw.04G050600 Carya illinoinensis HOM05D008889 ORTHO05D009956 2.3e-06 56.2 75 46.7
Gohir.A08G052300 Gossypium hirsutum HOM05D008889 ORTHO05D009956 2.3e-06 56.2 72 41.7
Gohir.D08G061900 Gossypium hirsutum HOM05D009227 ORTHO05D009956 2.3e-06 56.2 72 41.7
Gorai.004G064000 Gossypium raimondii HOM05D009227 ORTHO05D009956 2.3e-06 56.2 72 41.7
Medtr4g112870 Medicago truncatula HOM05D008563 ORTHO05D009802 2.3e-06 56.2 139 36.0
Ca_23534_v3 Cicer arietinum L. HOM05D008889 ORTHO05D009956 3.0e-06 55.8 124 39.5
Lalb_Chr10g0092501 Lupinus albus HOM05D008889 ORTHO05D009956 3.0e-06 55.8 124 39.5
MD17G1069000 Malus domestica HOM05D008889 ORTHO05D009956 4.0e-06 55.5 76 47.4
CSS0034251 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 5.2e-06 55.1 134 38.1
CSS0042453 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 5.2e-06 55.1 134 38.1
Oeu048107.1 Olea europaea HOM05D026131 ORTHO05D009956 5.2e-06 55.1 75 48.0
Cpa.g.sc3.202 Carica papaya HOM05D014920 ORTHO05D009802 6.8e-06 54.7 80 45.0
TWI60G1323 Tripterygium wilfordii HOM05D008889 ORTHO05D009956 6.8e-06 54.7 67 58.2
Lj4g0009196 Lotus japonicus HOM05D008563 ORTHO05D009802 8.9e-06 54.3 130 36.9
Lalb_Chr04g0258271 Lupinus albus HOM05D008889 ORTHO05D009956 8.9e-06 54.3 122 38.5
Sp2g18210 Schrenkiella parvula HOM05D009227 ORTHO05D009956 8.9e-06 54.3 128 35.9


User provided reference genes

Program Settings