Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G186200 Phaseolus vulgaris HOM05D007067 ORTHO05D008864 5.1e-102 374.4 187 100.0
Glyma.06G195200 Glycine max HOM05D007067 ORTHO05D008864 1.2e-82 310.1 182 83.5
Glyma.04G167400 Glycine max HOM05D007067 ORTHO05D008864 3.4e-82 308.5 182 84.6
Lj1g0007284 Lotus japonicus HOM05D007067 ORTHO05D008864 6.3e-76 287.7 187 77.5
Ca_27682_v3 Cicer arietinum L. HOM05D007067 ORTHO05D008864 4.5e-74 281.6 187 75.9
TPR.G11876 Trifolium pratense HOM05D007067 ORTHO05D008864 4.5e-74 281.6 188 77.1
Lalb_Chr08g0235641 Lupinus albus HOM05D007067 ORTHO05D008864 8.5e-73 277.3 193 75.6
arahy.Tifrunner.gnm1.ann1.JMB3VF Arachis hypogaea HOM05D007067 ORTHO05D008864 1.4e-72 276.6 187 76.5
arahy.Tifrunner.gnm1.ann1.V8ZK3N Arachis hypogaea HOM05D007067 ORTHO05D008864 4.7e-71 271.6 187 75.9
Medtr3g435320 Medicago truncatula HOM05D007067 ORTHO05D008864 4.7e-71 271.6 188 76.1
Psat5g201280 Pisum sativum HOM05D007067 ORTHO05D008864 6.1e-71 271.2 188 74.5
Prupe.5G195500 Prunus persica HOM05D007067 ORTHO05D008864 1.0e-65 253.8 191 69.1
MD06G1195600 Malus domestica HOM05D007067 ORTHO05D008864 1.9e-64 249.6 188 68.6
Cfa018925 Carpinus fangiana HOM05D007067 ORTHO05D008864 6.1e-63 244.6 187 69.0
MD14G1202700 Malus domestica HOM05D007067 ORTHO05D008864 1.8e-62 243.0 189 68.3
RcHm_v2.0_Chr7g0181701 Rosa chinensis HOM05D007067 ORTHO05D008864 1.3e-60 236.9 192 67.2
FAN08G0270 Fragaria x ananassa HOM05D007067 ORTHO05D008864 1.7e-60 236.5 192 67.2
FAN13G0188 Fragaria x ananassa HOM05D007067 ORTHO05D008864 1.7e-60 236.5 192 67.2
FAN18G1220 Fragaria x ananassa HOM05D007067 ORTHO05D008864 1.7e-60 236.5 192 67.2
QL10p017305 Quercus lobata HOM05D007067 ORTHO05D008864 1.7e-60 236.5 187 66.3
Cc04_g16320 Coffea canephora HOM05D007067 ORTHO05D008864 2.8e-60 235.7 188 66.0
CiPaw.11G046200 Carya illinoinensis HOM05D007067 ORTHO05D008864 1.4e-59 233.4 182 67.0
GSVIVG01004672001 Vitis vinifera HOM05D007067 ORTHO05D008864 1.8e-59 233.0 182 65.4
GSVIVG01005334001 Vitis vinifera HOM05D007067 ORTHO05D008864 1.8e-59 233.0 182 65.4
CSS0040643 Camellia sinensis var. sinensis HOM05D007067 ORTHO05D008864 3.1e-59 232.3 188 66.5
Nitab4.5_0003381g0030 Nicotiana tabacum HOM05D007067 ORTHO05D008864 5.9e-58 228.0 187 64.7
TAR622G0622 Trochodendron aralioides HOM05D007067 ORTHO05D008864 5.9e-58 228.0 190 66.3
Nitab4.5_0005226g0040 Nicotiana tabacum HOM05D007067 ORTHO05D008864 1.3e-57 226.9 189 65.6
Actinidia04879 Actinidia chinensis HOM05D007067 ORTHO05D008864 3.8e-57 225.3 182 61.0
Rhsim08G0153200 Rhododendron simsii HOM05D007067 ORTHO05D008864 8.5e-57 224.2 188 64.9
Nn3g17293 Nelumbo nucifera HOM05D007067 ORTHO05D008864 1.1e-56 223.8 188 63.3
CAN.G846.12 Capsicum annuum HOM05D007067 ORTHO05D008864 1.5e-56 223.4 187 63.1
SalBow3G2729 Salvia bowleyana HOM05D007067 ORTHO05D008864 1.9e-56 223.0 187 65.2
TWI60G1483 Tripterygium wilfordii HOM05D007067 ORTHO05D008864 4.2e-56 221.9 182 65.4
Manes.06G091000 Manihot esculenta HOM05D007067 ORTHO05D008864 2.1e-55 219.5 183 63.4
vmacro17532 Vaccinium macrocarpon HOM05D007067 ORTHO05D008864 4.7e-55 218.4 186 62.9
CDE02G3919 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 6.1e-55 218.0 189 61.4
MSTRG.9621 Avicennia marina HOM05D007067 ORTHO05D008864 1.4e-54 216.9 189 60.3
Potri.012G068500 Populus trichocarpa HOM05D007067 ORTHO05D008864 1.8e-54 216.5 181 61.9
MBI02_g12272_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 8.8e-54 214.2 185 60.0
DCAR_016569 Daucus carota HOM05D007067 ORTHO05D008864 2.0e-53 213.0 186 63.4
MELO3C017182.2 Cucumis melo HOM05D007067 ORTHO05D008864 2.6e-53 212.6 181 60.8
EL10Ac5g11044 Beta vulgaris HOM05D007067 ORTHO05D008864 4.4e-53 211.8 187 59.4
Aqoxy3G00483 Aquilegia oxysepala HOM05D007067 ORTHO05D008864 9.8e-53 210.7 188 60.1
CsaV3_1G002440 Cucumis sativus L. HOM05D007067 ORTHO05D008864 1.3e-52 210.3 181 60.8
Hma1.2p1_0637F.1_g193620 Hydrangea macrophylla HOM05D007067 ORTHO05D008864 1.4e-51 206.8 129 78.3
Sabra12G0047100 Salix brachista HOM05D007067 ORTHO05D008864 3.1e-51 205.7 182 61.0
PSO063G5395 Papaver somniferum HOM05D007067 ORTHO05D008864 4.1e-51 205.3 188 59.6
CANSAT56G4102 Cannabis sativa HOM05D007067 ORTHO05D008864 7.0e-51 204.5 185 61.6
ClCG06G016120 Citrullus lanatus HOM05D007067 ORTHO05D008864 7.0e-51 204.5 181 58.6
Eucgr.K02487 Eucalyptus grandis HOM05D007067 ORTHO05D008864 7.0e-51 204.5 181 58.6
PSO832G0421 Papaver somniferum HOM05D007067 ORTHO05D008864 7.0e-51 204.5 188 59.6
Solyc12g036170.2 Solanum lycopersicum HOM05D007067 ORTHO05D008864 9.1e-51 204.1 161 65.8
Sopen12g016290 Solanum pennellii HOM05D007067 ORTHO05D008864 2.0e-50 203.0 184 59.8
PGSC0003DMG400021933 Solanum tuberosum HOM05D007067 ORTHO05D008864 3.5e-50 202.2 182 59.3
Lj5A109T72 Lonicera japonica HOM05D007067 ORTHO05D008864 4.5e-50 201.8 152 66.4
Sed0012968 Sechium edule HOM05D007067 ORTHO05D008864 4.5e-50 201.8 182 58.8
Peaxi162Scf00106g00326 Petunia axillaris HOM05D007067 ORTHO05D008864 1.0e-49 200.7 169 62.7
HanXRQChr05g0156061 Helianthus annuus HOM05D007067 ORTHO05D008864 1.3e-49 200.3 188 60.6
Duzib205G1209 Durio zibethinus HOM05D007067 ORTHO05D008864 1.7e-49 199.9 188 59.0
Migut.D01803 Erythranthe guttata HOM05D007067 ORTHO05D008864 1.7e-49 199.9 185 58.4
Cpa.g.sc111.20 Carica papaya HOM05D007067 ORTHO05D008864 8.5e-49 197.6 182 58.2
Thecc.03G091100 Theobroma cacao HOM05D007067 ORTHO05D008864 1.1e-48 197.2 186 57.0
AUR62008437 Chenopodium quinoa HOM05D007067 ORTHO05D008864 1.9e-48 196.4 134 71.6
ECA246G0430 Erigeron canadensis HOM05D007067 ORTHO05D008864 5.5e-48 194.9 192 56.8
Dinv38731 Davidia involucrata HOM05D007067 ORTHO05D008864 7.2e-48 194.5 187 56.7
Atru.chr9.195 Acer truncatum HOM05D007067 ORTHO05D008864 1.6e-47 193.4 184 59.2
CDE09G1053 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 1.6e-47 193.4 122 74.6
Gohir.D03G093800 Gossypium hirsutum HOM05D007067 ORTHO05D008864 2.3e-46 189.5 182 58.2
Gorai.003G097800 Gossypium raimondii HOM05D007067 ORTHO05D008864 2.3e-46 189.5 182 58.2
Gohir.A03G067300 Gossypium hirsutum HOM05D007067 ORTHO05D008864 1.2e-45 187.2 182 57.7
Lsat_1_v5_gn_5_20880 Lactuca sativa HOM05D007067 ORTHO05D008864 1.2e-45 187.2 127 75.6
Eucgr.K02485 Eucalyptus grandis HOM05D007067 ORTHO05D008864 9.8e-45 184.1 168 56.0
unitig_0.g778 Utricularia gibba HOM05D007067 ORTHO05D008864 1.3e-44 183.7 194 53.6
THA.LOC104808257 Tarenaya hassleriana HOM05D007067 ORTHO05D008864 2.8e-44 182.6 190 54.7
ATR0564G121 Amborella trichopoda HOM05D007067 ORTHO05D008864 1.8e-43 179.9 199 54.3
C08p43060 Brassica napus HOM05D007067 ORTHO05D008864 5.4e-43 178.3 142 64.8
PGR044G1431 Punica granatum HOM05D007067 ORTHO05D008864 7.0e-43 177.9 181 55.2
BcaB07g31890 Brassica carinata HOM05D007067 ORTHO05D008864 9.1e-43 177.6 182 54.9
AL1G31200 Arabidopsis lyrata HOM05D007067 ORTHO05D008864 1.2e-42 177.2 183 56.8
AT1G18730 Arabidopsis thaliana HOM05D007067 ORTHO05D008864 1.2e-42 177.2 186 57.0
A09p59720 Brassica napus HOM05D007067 ORTHO05D008864 1.2e-42 177.2 127 70.1
BraA09t41348Z Brassica rapa HOM05D007067 ORTHO05D008864 1.2e-42 177.2 127 70.1
Peaxi162Scf00106g00037 Petunia axillaris HOM05D007067 ORTHO05D008864 1.2e-42 177.2 117 76.9
A06p14840 Brassica napus HOM05D007067 ORTHO05D008864 1.6e-42 176.8 127 70.1
C05p17040 Brassica napus HOM05D007067 ORTHO05D008864 1.6e-42 176.8 127 70.1
BolC5t30410H Brassica oleracea HOM05D007067 ORTHO05D008864 1.6e-42 176.8 127 70.1
BraA06t24606Z Brassica rapa HOM05D007067 ORTHO05D008864 1.6e-42 176.8 127 70.1
Thhalv10008902m.g Eutrema salsugineum HOM05D007067 ORTHO05D008864 1.6e-42 176.8 127 70.1
Sp1g16740 Schrenkiella parvula HOM05D007067 ORTHO05D008864 1.6e-42 176.8 182 57.7
Carub.0001s1838 Capsella rubella HOM05D007067 ORTHO05D008864 2.7e-42 176.0 184 56.0
BcaC05g25773 Brassica carinata HOM05D007067 ORTHO05D008864 3.5e-42 175.6 183 56.3
CARHR019370 Cardamine hirsuta HOM05D007067 ORTHO05D008864 4.5e-42 175.3 127 69.3
BcaB03g14481 Brassica carinata HOM05D007067 ORTHO05D008864 7.7e-42 174.5 127 69.3
BolC8t51861H Brassica oleracea HOM05D007067 ORTHO05D008864 2.5e-40 169.5 128 68.8
MBI02_g23462_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 9.5e-40 167.5 184 50.5
Zm00001eb254450 Zea mays HOM05D007067 ORTHO05D008864 6.1e-39 164.9 139 60.4
AUR62021654 Chenopodium quinoa HOM05D007067 ORTHO05D008864 1.4e-38 163.7 148 60.8
Aa31LG7G3520 Aethionema arabicum HOM05D007067 ORTHO05D008864 6.8e-38 161.4 117 64.1
Os02g0744000 Oryza sativa ssp. japonica HOM05D007067 ORTHO05D008864 3.2e-35 152.5 118 64.4
COL.COLO4_28333 Corchorus olitorius HOM05D007067 ORTHO05D008864 3.9e-33 145.6 186 48.4
FvH4_5g14690 Fragaria vesca HOM05D007067 ORTHO05D008864 3.6e-31 139.0 124 58.9
BcaC07g41296 Brassica carinata HOM05D007067 ORTHO05D008864 1.8e-30 136.7 92 69.6
SEGI_39094 Sequoiadendron giganteum HOM05D007067 ORTHO05D008864 9.8e-29 131.0 148 50.0
Ciclev10022880m.g Citrus clementina HOM05D007067 ORTHO05D008864 9.2e-27 124.4 116 57.8
Rhsim08G0153500 Rhododendron simsii HOM05D007067 ORTHO05D008864 1.3e-25 120.6 188 42.6
CBR_g30507 Chara braunii HOM05D007067 ORTHO05D008864 1.8e-22 110.2 94 61.7
Mapoly0149s0008 Marchantia polymorpha HOM05D007067 ORTHO05D008864 6.0e-18 95.1 102 46.1
Haze_07309 Corylus avellana HOM05D007067 ORTHO05D008864 2.5e-16 89.7 187 38.0
Manes.06G090801 Manihot esculenta HOM05D007067 ORTHO05D008864 1.2e-15 87.4 113 46.9
Pp3c16_3930 Physcomitrium patens HOM05D007067 ORTHO05D008864 5.2e-14 82.0 94 47.9
Ah.11g048310 Amaranthus hybridus HOM05D007067 ORTHO05D008864 6.4e-12 75.1 100 45.0


User provided reference genes

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