Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G181400 Phaseolus vulgaris HOM05D006272 ORTHO05D007989 3.5e-126 454.9 222 100.0
VMungo1309G0353 Vigna mungo HOM05D006272 ORTHO05D007989 7.4e-116 420.6 222 92.3
Glyma.06G185200 Glycine max HOM05D006272 ORTHO05D007989 1.1e-100 370.2 219 83.6
Glyma.04G179400 Glycine max HOM05D006272 ORTHO05D007989 3.8e-96 355.1 224 79.9
TPR.G15079 Trifolium pratense HOM05D006272 ORTHO05D007989 1.7e-88 329.7 227 76.7
Medtr3g078320 Medicago truncatula HOM05D006272 ORTHO05D007989 2.6e-84 315.8 227 73.6
Ca_16206_v3 Cicer arietinum L. HOM05D006272 ORTHO05D007989 4.4e-84 315.1 230 74.8
Lalb_Chr23g0273081 Lupinus albus HOM05D006272 ORTHO05D007989 5.7e-84 314.7 227 74.0
Psat5g113800 Pisum sativum HOM05D006272 ORTHO05D007989 1.4e-82 310.1 224 71.9
Lj1g0014498 Lotus japonicus HOM05D006272 ORTHO05D007989 1.0e-80 303.9 232 72.8
Haze_07447 Corylus avellana HOM05D006272 ORTHO05D007989 5.5e-79 298.1 223 69.1
Manes.14G069600 Manihot esculenta HOM05D006272 ORTHO05D007989 1.6e-78 296.6 227 67.0
Potri.015G072000 Populus trichocarpa HOM05D006272 ORTHO05D007989 6.7e-77 291.2 222 65.8
CANSAT80G1784 Cannabis sativa HOM05D006272 ORTHO05D007989 2.0e-76 289.7 224 66.5
CAN.G2099.3 Capsicum annuum HOM05D006272 ORTHO05D007989 1.3e-75 287.0 229 67.2
QL10p013391 Quercus lobata HOM05D006272 ORTHO05D007989 4.8e-75 285.0 226 66.4
Eucgr.B00343 Eucalyptus grandis HOM05D006272 ORTHO05D007989 1.8e-74 283.1 227 65.2
Ciclev10022132m.g Citrus clementina HOM05D006272 ORTHO05D007989 4.1e-74 282.0 225 65.8
arahy.Tifrunner.gnm1.ann1.I0QXBL Arachis hypogaea HOM05D006272 ORTHO05D007989 1.6e-73 280.0 215 70.2
CiPaw.12G023800 Carya illinoinensis HOM05D006272 ORTHO05D007989 1.6e-73 280.0 226 65.0
Duzib205G0574 Durio zibethinus HOM05D006272 ORTHO05D007989 5.9e-73 278.1 222 65.8
Prupe.5G178100 Prunus persica HOM05D006272 ORTHO05D007989 5.9e-73 278.1 208 67.8
Sabra15G0096800 Salix brachista HOM05D006272 ORTHO05D007989 1.3e-72 276.9 224 63.4
Sopen03g033040 Solanum pennellii HOM05D006272 ORTHO05D007989 3.8e-72 275.4 222 66.2
Solyc03g113990.3 Solanum lycopersicum HOM05D006272 ORTHO05D007989 8.5e-72 274.2 219 64.8
Actinidia19083 Actinidia chinensis HOM05D006272 ORTHO05D007989 1.5e-71 273.5 167 77.8
Gohir.D03G150700 Gossypium hirsutum HOM05D006272 ORTHO05D007989 1.5e-71 273.5 199 70.4
PGSC0003DMG400024586 Solanum tuberosum HOM05D006272 ORTHO05D007989 3.2e-71 272.3 225 63.1
vmacro16592 Vaccinium macrocarpon HOM05D006272 ORTHO05D007989 4.2e-71 271.9 167 77.2
MD06G1180000 Malus domestica HOM05D006272 ORTHO05D007989 1.2e-70 270.4 225 63.6
COL.COLO4_04328 Corchorus olitorius HOM05D006272 ORTHO05D007989 1.6e-70 270.0 176 73.9
MD14G1185400 Malus domestica HOM05D006272 ORTHO05D007989 1.6e-70 270.0 167 77.2
Thecc.03G005700 Theobroma cacao HOM05D006272 ORTHO05D007989 1.6e-70 270.0 232 61.2
RcHm_v2.0_Chr7g0179601 Rosa chinensis HOM05D006272 ORTHO05D007989 2.1e-70 269.6 172 75.0
GSVIVG01007814001 Vitis vinifera HOM05D006272 ORTHO05D007989 2.1e-70 269.6 201 70.6
Ah.11g046120 Amaranthus hybridus HOM05D006272 ORTHO05D007989 3.6e-70 268.9 227 61.2
Atru.chr9.2416 Acer truncatum HOM05D006272 ORTHO05D007989 4.7e-70 268.5 227 62.6
Rhsim12G0162200 Rhododendron simsii HOM05D006272 ORTHO05D007989 4.7e-70 268.5 188 71.3
CsaV3_1G001760 Cucumis sativus L. HOM05D006272 ORTHO05D007989 8.0e-70 267.7 166 75.3
CSS0043549 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 1.0e-69 267.3 220 61.8
FvH4_5g16490 Fragaria vesca HOM05D006272 ORTHO05D007989 1.4e-69 266.9 191 69.1
ClCG06G016760 Citrullus lanatus HOM05D006272 ORTHO05D007989 4.0e-69 265.4 208 64.4
Nitab4.5_0006432g0010 Nicotiana tabacum HOM05D006272 ORTHO05D007989 4.0e-69 265.4 217 64.1
MSTRG.4383 Avicennia marina HOM05D006272 ORTHO05D007989 5.2e-69 265.0 167 73.7
Gohir.A03G017300 Gossypium hirsutum HOM05D006272 ORTHO05D007989 5.2e-69 265.0 161 78.3
EL10Ac5g10820 Beta vulgaris HOM05D006272 ORTHO05D007989 6.8e-69 264.6 212 63.7
PGR083G1342 Punica granatum HOM05D006272 ORTHO05D007989 1.5e-68 263.5 197 67.5
Gorai.003G157900 Gossypium raimondii HOM05D006272 ORTHO05D007989 2.0e-68 263.1 157 79.6
MD06G1180300 Malus domestica HOM05D006272 ORTHO05D007989 2.0e-68 263.1 233 61.4
Aqoxy3G03085 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 3.4e-68 262.3 219 61.2
Sc12g0005560 Simmondsia chinensis HOM05D006272 ORTHO05D007989 4.4e-68 261.9 164 75.6
Carub.0008s1010 Capsella rubella HOM05D006272 ORTHO05D007989 7.5e-68 261.2 221 63.3
Cc04_g13100 Coffea canephora HOM05D006272 ORTHO05D007989 7.5e-68 261.2 157 76.4
Migut.D01790 Erythranthe guttata HOM05D006272 ORTHO05D007989 7.5e-68 261.2 189 66.1
HanXRQChr16g0503601 Helianthus annuus HOM05D006272 ORTHO05D007989 9.8e-68 260.8 178 67.4
Sed0009129 Sechium edule HOM05D006272 ORTHO05D007989 1.7e-67 260.0 224 62.1
ECA232G4277 Erigeron canadensis HOM05D006272 ORTHO05D007989 3.7e-67 258.8 191 64.4
Cfa019077 Carpinus fangiana HOM05D006272 ORTHO05D007989 4.8e-67 258.5 200 66.5
Os04g0668800 Oryza sativa ssp. japonica HOM05D006272 ORTHO05D007989 4.8e-67 258.5 162 72.8
TAR622G0996 Trochodendron aralioides HOM05D006272 ORTHO05D007989 6.3e-67 258.1 214 63.1
Oeu041583.1 Olea europaea HOM05D006272 ORTHO05D007989 1.8e-66 256.5 154 77.3
THA.LOC104809256 Tarenaya hassleriana HOM05D006272 ORTHO05D007989 1.8e-66 256.5 214 62.1
FAN18G3972 Fragaria x ananassa HOM05D006272 ORTHO05D007989 4.1e-66 255.4 210 62.9
arahy.Tifrunner.gnm1.ann1.LZB4LR Arachis hypogaea HOM05D006272 ORTHO05D007989 9.1e-66 254.2 203 66.5
CDE04G2481 Ceratophyllum demersum HOM05D006272 ORTHO05D006222 9.1e-66 254.2 153 77.8
CSS0019620 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 1.2e-65 253.8 207 62.3
FAN04G2131 Fragaria x ananassa HOM05D006272 ORTHO05D007989 1.6e-65 253.4 177 70.1
FAN13G1305 Fragaria x ananassa HOM05D006272 ORTHO05D007989 1.6e-65 253.4 177 70.1
Lsat_1_v5_gn_4_72700 Lactuca sativa HOM05D006272 ORTHO05D007989 2.7e-65 252.7 164 72.6
PSO832G1007 Papaver somniferum HOM05D006272 ORTHO05D007989 5.9e-65 251.5 245 56.3
Aqoxy3G03086 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 1.0e-64 250.8 203 63.5
AUR62031036 Chenopodium quinoa HOM05D006272 ORTHO05D007989 1.0e-64 250.8 156 75.0
AUR62008277 Chenopodium quinoa HOM05D006272 ORTHO05D007989 1.3e-64 250.4 167 70.1
Lj5A121G99 Lonicera japonica HOM05D006272 ORTHO05D007989 1.7e-64 250.0 182 69.2
SGA_v2.0_scaffold114G31850 Striga asiatica HOM05D006272 ORTHO05D007989 1.7e-64 250.0 169 71.0
Zm00001eb433220 Zea mays HOM05D006272 ORTHO05D007989 1.7e-64 250.0 182 66.5
BcaC04g20846 Brassica carinata HOM05D006272 ORTHO05D007989 2.9e-64 249.2 200 63.0
BolC9t56708H Brassica oleracea HOM05D006272 ORTHO05D007989 2.9e-64 249.2 200 63.0
BraSC37t46149Z Brassica rapa HOM05D006272 ORTHO05D007989 5.0e-64 248.4 200 62.5
MELO3C017116.2 Cucumis melo HOM05D006272 ORTHO05D007989 8.5e-64 247.7 153 74.5
Thhalv10014644m.g Eutrema salsugineum HOM05D006272 ORTHO05D007989 8.5e-64 247.7 191 64.9
Aa31LG3G6090 Aethionema arabicum HOM05D006272 ORTHO05D007989 1.9e-63 246.5 217 61.3
AL8G24090 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 2.5e-63 246.1 220 60.5
Nn4g22890 Nelumbo nucifera HOM05D006272 ORTHO05D007524 4.2e-63 245.4 213 59.6
AT5G50100 Arabidopsis thaliana HOM05D006272 ORTHO05D007989 9.5e-63 244.2 221 59.7
Sp6g11960 Schrenkiella parvula HOM05D006272 ORTHO05D007989 2.7e-62 242.7 201 63.7
BcaB08g35362 Brassica carinata HOM05D006272 ORTHO05D007989 1.0e-61 240.7 188 65.4
C09p38510 Brassica napus HOM05D006272 ORTHO05D007989 3.0e-61 239.2 187 63.6
Peaxi162Scf00017g02427 Petunia axillaris HOM05D006272 ORTHO05D007989 6.8e-61 238.0 227 57.7
A10p08550 Brassica napus HOM05D006272 ORTHO05D007989 1.5e-60 236.9 187 63.1
unitig_46.g18473 Utricularia gibba HOM05D004430 ORTHO05D007989 2.0e-60 236.5 177 64.4
PSO063G7353 Papaver somniferum HOM05D006272 ORTHO05D007989 4.4e-60 235.3 232 55.6
Hund09410 Selenicereus undatus HOM05D006272 ORTHO05D007989 5.7e-60 235.0 200 62.0
Nitab4.5_0001422g0120 Nicotiana tabacum HOM05D006272 ORTHO05D007989 1.3e-59 233.8 198 63.1
DCAR_021559 Daucus carota HOM05D006272 ORTHO05D007989 4.1e-58 228.8 148 73.6
Cpa.g.c38966 Carica papaya HOM05D006272 ORTHO05D007989 5.4e-58 228.4 125 84.0
Mapoly0071s0065 Marchantia polymorpha HOM05D006272 ORTHO05D007989 2.7e-57 226.1 171 62.0
FAN08G1485 Fragaria x ananassa HOM05D006272 ORTHO05D007989 4.5e-57 225.3 181 64.1
HPP92_028587 Vanilla planifolia HOM05D006272 ORTHO05D007989 6.6e-56 221.5 152 68.4
ATR1149G021 Amborella trichopoda HOM05D006272 ORTHO05D007989 8.6e-56 221.1 147 70.1
MBI15_g12943_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 2.0e-52 209.9 177 60.5
Pp3c1_15150 Physcomitrium patens HOM05D006272 ORTHO05D007989 2.6e-52 209.5 191 55.0
CSS0030983 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 4.4e-52 208.8 139 74.1
TWI15G0925 Tripterygium wilfordii HOM05D006272 ORTHO05D007989 3.0e-48 196.1 178 60.7
CBR_g17090 Chara braunii HOM05D006272 ORTHO05D007989 3.3e-47 192.6 152 53.9
Sed0028033 Sechium edule HOM05D006272 ORTHO05D007989 1.3e-43 180.6 119 72.3
CARHR258530 Cardamine hirsuta HOM05D006272 ORTHO05D007989 7.0e-42 174.9 197 51.3
SMO134G0173 Selaginella moellendorffii HOM05D006272 ORTHO05D007989 3.0e-40 169.5 111 65.8
SalBow3G0460 Salvia bowleyana HOM05D006272 ORTHO05D007989 4.0e-37 159.1 93 80.6
Hma1.2p1_1643F.1_g295250 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 1.4e-34 150.6 157 55.4
Hma1.2p1_2351F.1_g320495 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 1.4e-34 150.6 157 55.4
AL8G10070 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 3.5e-33 146.0 93 75.3
Cre03.g145587 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 3.9e-32 142.5 168 42.9
PRCOL_00006774 Prasinoderma coloniale HOM05D006272 ORTHO05D007989 1.5e-31 140.6 136 47.8
MCO16G260 Micromonas commoda HOM05D006272 ORTHO05D007989 2.1e-30 136.7 128 46.1
QL12p034838 Quercus lobata HOM05D006272 ORTHO05D007989 3.1e-29 132.9 82 75.6
Cpa.g.c35589.1 Carica papaya HOM05D006272 ORTHO05D007989 2.1e-25 120.2 139 51.1
MBI15_g10564_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 4.6e-25 119.0 102 59.8
Dinv09172 Davidia involucrata HOM05D006272 ORTHO05D007989 1.0e-24 117.9 130 51.5
Gohir.A03G017120 Gossypium hirsutum HOM05D006272 ORTHO05D007989 1.7e-24 117.1 81 70.4
SalBow3G4540 Salvia bowleyana HOM05D006272 ORTHO05D007989 4.0e-21 105.9 101 54.5
Cre02.g095077 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 4.6e-17 92.4 151 32.5
TPR.G22672 Trifolium pratense HOM05D006272 ORTHO05D007989 8.4e-11 71.6 38 86.8
PRCOL_00004884 Prasinoderma coloniale HOM05D006272 ORTHO05D030206 8.7e-08 61.6 164 26.8


User provided reference genes

Program Settings