Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G177300 Phaseolus vulgaris HOM05D000922 ORTHO05D007418 0.0e+00 1958.0 1017 100.0
VMungo1309G1607 Vigna mungo HOM05D000922 ORTHO05D007418 0.0e+00 1699.5 1018 87.0
Glyma.04G184600 Glycine max HOM05D000922 ORTHO05D007418 0.0e+00 1519.2 1042 78.5
Glyma.06G181100 Glycine max HOM05D000922 ORTHO05D007418 0.0e+00 1447.6 1029 75.7
Ca_16166_v3 Cicer arietinum L. HOM05D000922 ORTHO05D007418 0.0e+00 1248.0 1026 67.5
TPR.G20687 Trifolium pratense HOM05D000922 ORTHO05D007418 0.0e+00 1203.3 1029 64.6
Lj1g0015886 Lotus japonicus HOM05D000922 ORTHO05D007418 0.0e+00 1196.4 1032 65.4
Medtr3g077620 Medicago truncatula HOM05D000922 ORTHO05D007418 0.0e+00 1195.3 1027 65.1
Psat0ss3962g0400 Pisum sativum HOM05D000922 ORTHO05D007418 0.0e+00 1162.1 1018 63.7
arahy.Tifrunner.gnm1.ann1.9TFG5W Arachis hypogaea HOM05D000922 ORTHO05D007418 0.0e+00 1092.8 1132 57.9
arahy.Tifrunner.gnm1.ann1.F0ZNJX Arachis hypogaea HOM05D000922 ORTHO05D007418 0.0e+00 1085.5 1132 57.3
Lalb_Chr23g0273281 Lupinus albus HOM05D000922 ORTHO05D007418 1.9e-267 926.4 559 82.1
Prupe.5G171800 Prunus persica HOM05D000922 ORTHO05D007418 8.6e-244 847.8 1157 46.3
QL10p011002 Quercus lobata HOM05D000922 ORTHO05D007418 5.5e-243 845.1 1103 48.1
FvH4_5g05470 Fragaria vesca HOM05D000922 ORTHO05D007418 1.6e-242 843.6 1145 46.8
FAN18G1332 Fragaria x ananassa HOM05D000922 ORTHO05D007418 6.1e-242 841.6 1138 46.9
GSVIVG01007724001 Vitis vinifera HOM05D000922 ORTHO05D007418 8.0e-242 841.3 1038 49.2
CiPaw.11G024700 Carya illinoinensis HOM05D000922 ORTHO05D007418 1.0e-241 840.9 1153 46.1
RcHm_v2.0_Chr7g0193371 Rosa chinensis HOM05D000922 ORTHO05D007418 3.0e-241 839.3 1140 46.1
MD06G1172500 Malus domestica HOM05D000922 ORTHO05D007418 1.2e-240 837.4 1168 46.6
FAN08G1289 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.5e-240 837.0 1120 47.6
CANSAT80G2096 Cannabis sativa HOM05D000922 ORTHO05D007418 4.4e-240 835.5 1163 46.7
Cfa019149 Carpinus fangiana HOM05D000922 ORTHO05D007418 1.2e-237 827.4 1180 45.3
Manes.14G064400 Manihot esculenta HOM05D000922 ORTHO05D007418 1.1e-235 820.8 1110 46.8
Atru.chr9.2494 Acer truncatum HOM05D000922 ORTHO05D007418 9.8e-232 807.7 1145 45.4
Haze_07516 Corylus avellana HOM05D000922 ORTHO05D007418 1.3e-231 807.4 1217 44.3
Thecc.03G014400 Theobroma cacao HOM05D000922 ORTHO05D007418 4.9e-231 805.4 1061 47.5
MD14G1178400 Malus domestica HOM05D000922 ORTHO05D007418 2.4e-230 803.1 1157 44.9
Duzib205G1607 Durio zibethinus HOM05D000922 ORTHO05D007418 3.2e-230 802.7 1010 49.2
FAN13G2825 Fragaria x ananassa HOM05D000922 ORTHO05D007418 9.2e-230 801.2 1181 43.9
Potri.012G082500 Populus trichocarpa HOM05D000922 ORTHO05D007418 9.2e-230 801.2 1094 46.9
Gohir.D12G275700 Gossypium hirsutum HOM05D000922 ORTHO05D007418 1.2e-229 800.8 1049 48.3
FAN18G2587 Fragaria x ananassa HOM05D000922 ORTHO05D007418 6.0e-229 798.5 1223 43.7
Gorai.008G296200 Gossypium raimondii HOM05D000922 ORTHO05D007418 5.0e-228 795.4 1049 48.0
Potri.015G078300 Populus trichocarpa HOM05D000922 ORTHO05D007418 3.6e-226 789.3 1079 46.2
Sabra12G0059200 Salix brachista HOM05D000922 ORTHO05D007418 4.0e-225 785.8 1080 46.3
CSS0017974 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D007418 6.8e-225 785.0 1158 44.0
Sabra15G0102900 Salix brachista HOM05D000922 ORTHO05D007418 1.1e-222 777.7 1082 46.8
Ciclev10018588m.g Citrus clementina HOM05D000922 ORTHO05D007418 7.0e-222 775.0 1142 44.0
FAN04G3074 Fragaria x ananassa HOM05D000922 ORTHO05D007418 9.2e-222 774.6 953 48.9
Hma1.2p1_2469F.1_g322680 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 4.6e-221 772.3 1141 44.2
Lj9A446G57 Lonicera japonica HOM05D000922 ORTHO05D007418 2.3e-220 770.0 1068 45.3
Duzib068G1349 Durio zibethinus HOM05D000922 ORTHO05D007418 3.9e-220 769.2 1057 46.5
Eucgr.B00297 Eucalyptus grandis HOM05D000922 ORTHO05D007418 8.9e-217 758.1 1051 46.1
Hma1.2p1_2165F.1_g315780 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 8.9e-217 758.1 828 51.4
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 2.3e-212 743.4 1126 42.2
TAR622G0946 Trochodendron aralioides HOM05D000922 ORTHO05D007418 8.6e-212 741.5 1163 43.0
DCAR_016480 Daucus carota HOM05D000922 ORTHO05D007418 2.8e-210 736.5 1142 42.4
TWI23G1000 Tripterygium wilfordii HOM05D000922 ORTHO05D007418 8.1e-210 734.9 1099 43.7
vmacro19399 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 6.8e-209 731.9 562 64.2
PGR083G1532 Punica granatum HOM05D000922 ORTHO05D007418 9.9e-208 728.0 1084 43.1
ClCG06G017060 Citrullus lanatus HOM05D000922 ORTHO05D007418 1.7e-207 727.2 1155 42.8
Cc04_g12110 Coffea canephora HOM05D000922 ORTHO05D007418 2.5e-203 713.4 1061 43.5
Thhalv10010097m.g Eutrema salsugineum HOM05D000922 ORTHO05D007418 8.1e-202 708.4 1035 42.9
Aa31LG4G16800 Aethionema arabicum HOM05D000922 ORTHO05D007418 4.4e-200 702.6 1014 43.8
Nn4g22714 Nelumbo nucifera HOM05D000922 ORTHO05D007418 4.4e-200 702.6 855 48.4
Migut.O00098 Erythranthe guttata HOM05D000922 ORTHO05D007418 2.9e-199 699.9 1079 42.5
CARHR156940 Cardamine hirsuta HOM05D000922 ORTHO05D007418 1.4e-198 697.6 1064 41.9
BcaB05g22925 Brassica carinata HOM05D000922 ORTHO05D007418 7.8e-197 691.8 1003 42.8
Sp5g13830 Schrenkiella parvula HOM05D000922 ORTHO05D007418 3.9e-196 689.5 1044 42.2
PSO478G1387 Papaver somniferum HOM05D000922 ORTHO05D007418 5.1e-196 689.1 1066 42.0
Aqoxy3G02884 Aquilegia oxysepala HOM05D000922 ORTHO05D007418 1.9e-195 687.2 1119 40.8
Carub.0005s1432 Capsella rubella HOM05D000922 ORTHO05D007418 5.6e-195 685.6 1080 41.7
Lsat_1_v5_gn_5_15041 Lactuca sativa HOM05D000922 ORTHO05D007418 7.3e-195 685.3 1031 41.4
Nitab4.5_0001514g0050 Nicotiana tabacum HOM05D000922 ORTHO05D007418 9.6e-195 684.9 1110 41.6
PSO017G6576 Papaver somniferum HOM05D000922 ORTHO05D007418 1.6e-194 684.1 836 47.2
Sed0021678 Sechium edule HOM05D000922 ORTHO05D007418 2.1e-194 683.7 1110 42.0
AL5G27540 Arabidopsis lyrata HOM05D000922 ORTHO05D007418 3.6e-194 682.9 1051 42.0
Sc04g0001750 Simmondsia chinensis HOM05D000922 ORTHO05D007418 2.4e-193 680.2 1127 41.6
MSTRG.23139 Avicennia marina HOM05D000922 ORTHO05D007418 3.1e-193 679.9 1122 40.9
AT3G48195 Arabidopsis thaliana HOM05D000922 ORTHO05D007418 9.9e-192 674.9 1013 43.8
EL10Ac5g10730 Beta vulgaris HOM05D000922 ORTHO05D007418 6.4e-191 672.2 1092 41.5
CAN.G1166.3 Capsicum annuum HOM05D000922 ORTHO05D007418 1.1e-190 671.4 865 45.5
BcaC09g49852 Brassica carinata HOM05D000922 ORTHO05D007418 2.4e-190 670.2 1013 42.2
Sopen03g031910 Solanum pennellii HOM05D000922 ORTHO05D007418 2.4e-190 670.2 880 45.6
BolC1t03155H Brassica oleracea HOM05D000922 ORTHO05D007418 1.6e-189 667.5 1012 42.2
MELO3C017091.2 Cucumis melo HOM05D000922 ORTHO05D007418 1.6e-189 667.5 1141 40.4
AUR62008194 Chenopodium quinoa HOM05D000922 ORTHO05D007418 2.7e-189 666.8 1034 42.4
Peaxi162Scf00089g01840 Petunia axillaris HOM05D000922 ORTHO05D007418 6.0e-189 665.6 857 45.3
HanXRQChr05g0155771 Helianthus annuus HOM05D000922 ORTHO05D007418 7.9e-189 665.2 1003 42.7
SGA_v2.0_scaffold90G27900 Striga asiatica HOM05D000922 ORTHO05D007418 7.9e-189 665.2 1048 41.5
BraA01t02462Z Brassica rapa HOM05D000922 ORTHO05D007418 1.8e-188 664.1 1031 41.9
A01p25510 Brassica napus HOM05D000922 ORTHO05D007418 6.7e-188 662.1 635 54.6
Peaxi162Scf00255g01019 Petunia axillaris HOM05D000922 ORTHO05D007418 3.3e-187 659.8 634 56.3
Hund02754 Selenicereus undatus HOM05D000922 ORTHO05D007418 1.3e-186 657.9 1112 40.8
AUR62030946 Chenopodium quinoa HOM05D000922 ORTHO05D007418 5.3e-185 652.5 1061 41.6
SalBow5G3118 Salvia bowleyana HOM05D000922 ORTHO05D007418 2.0e-184 650.6 961 42.9
SalBow5G1735 Salvia bowleyana HOM05D000922 ORTHO05D007418 7.9e-181 638.6 959 42.4
ATR1091G081 Amborella trichopoda HOM05D000922 ORTHO05D007418 1.9e-179 634.0 582 57.4
Oeu016401.1 Olea europaea HOM05D000922 ORTHO05D007418 6.2e-178 629.0 965 42.4
THA.LOC104798972 Tarenaya hassleriana HOM05D000922 ORTHO05D007418 3.4e-176 623.2 969 42.6
Ah.02g110580 Amaranthus hybridus HOM05D000922 ORTHO05D007418 3.8e-175 619.8 866 44.1
Gohir.A12G275000 Gossypium hirsutum HOM05D000922 ORTHO05D007418 6.9e-169 599.0 881 44.7
Solyc03g112830.4 Solanum lycopersicum HOM05D000922 ORTHO05D007418 8.5e-167 592.0 880 42.8
unitig_26.g9619 Utricularia gibba HOM05D000922 ORTHO05D007418 7.2e-166 589.0 1048 37.5
Os01g0549500 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D007418 1.1e-161 575.1 575 51.8
Dinv38573 Davidia involucrata HOM05D000922 ORTHO05D007418 1.8e-161 574.3 649 50.4
CDE06G1806 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 9.4e-158 562.0 492 58.1
HPP92_009707 Vanilla planifolia HOM05D000922 ORTHO05D007418 1.2e-152 545.0 769 42.9
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 8.5e-143 512.3 1136 35.2
Actinidia33077 Actinidia chinensis HOM05D000922 ORTHO05D007418 9.1e-129 465.7 392 62.0
Nitab4.5_0000025g0520 Nicotiana tabacum HOM05D000922 ORTHO05D007418 9.5e-126 455.7 1122 33.0
Zm00001eb162380 Zea mays HOM05D000922 ORTHO05D007418 2.8e-125 454.1 438 54.1
Cpa.g.sc2974.2 Carica papaya HOM05D000922 ORTHO05D007418 6.1e-125 453.0 319 68.3
CsaV3_1G001450 Cucumis sativus L. HOM05D000922 ORTHO05D007418 2.9e-122 444.1 890 37.2
SHI17077 Sapria himalayana HOM05D000922 ORTHO05D007418 7.8e-120 436.0 755 37.2
Mapoly0023s0026 Marchantia polymorpha HOM05D000922 ORTHO05D007418 4.0e-116 423.7 546 44.7
SEGI_24933 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 7.0e-113 412.9 548 42.5
SEGI_19196 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 1.1e-108 399.1 438 50.0
SMO367G0209 Selaginella moellendorffii HOM05D000922 ORTHO05D007418 4.0e-108 397.1 503 41.0
Pp3c26_1280 Physcomitrium patens HOM05D000922 ORTHO05D007418 9.2e-105 386.0 599 39.9
COL.COLO4_30068 Corchorus olitorius HOM05D000922 ORTHO05D007418 1.4e-100 372.1 818 36.1
Actinidia19330 Actinidia chinensis HOM05D000922 ORTHO05D007418 8.1e-93 346.3 891 33.0
Dinv20638 Davidia involucrata HOM05D000922 ORTHO05D007418 1.1e-73 282.7 231 64.5
Cpa.g.sc2974.1 Carica papaya HOM05D000922 ORTHO05D007418 7.4e-70 270.0 729 32.1
ECA246G4214 Erigeron canadensis HOM05D000922 ORTHO05D007418 4.9e-66 257.3 229 56.8
C01p31950 Brassica napus HOM05D000922 ORTHO05D007418 1.2e-59 236.1 645 30.9
ECA246G0682 Erigeron canadensis HOM05D000922 ORTHO05D007418 6.7e-55 220.3 635 31.8
Lalb_Chr23g0273291 Lupinus albus HOM05D000922 ORTHO05D007418 6.5e-42 177.2 602 32.4
CDE07G0520 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 5.5e-33 147.5 277 35.4
Psat4g066520 Pisum sativum HOM05D001026 ORTHO05D007418 1.5e-22 112.8 91 64.8
PRCOL_00005721 Prasinoderma coloniale HOM05D000922 ORTHO05D007418 3.2e-17 95.1 211 31.8
Peaxi162Scf00009g02111 Petunia axillaris HOM05D000861 ORTHO05D007418 6.1e-16 90.9 91 49.5
Peaxi162Scf00397g00009 Petunia axillaris HOM05D000922 ORTHO05D015732 1.8e-15 89.4 57 70.2
Peaxi162Scf00470g00024 Petunia axillaris HOM05D000861 ORTHO05D007418 1.8e-15 89.4 107 44.9
CAN.G1651.1 Capsicum annuum HOM05D003439 ORTHO05D000484 2.3e-15 89.0 69 59.4
Peaxi162Scf01130g00212 Petunia axillaris HOM05D000861 ORTHO05D007418 8.8e-15 87.0 49 77.6
Actinidia33076 Actinidia chinensis HOM05D000922 ORTHO05D007418 5.7e-14 84.3 176 37.5
Peaxi162Scf00304g01332 Petunia axillaris HOM05D000922 ORTHO05D007418 1.7e-13 82.8 53 67.9
FAN04G1664 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.2e-11 76.6 120 42.5
Cfa000646 Carpinus fangiana HOM05D000922 ORTHO05D007418 2.9e-10 72.0 157 37.6


User provided reference genes

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