Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G176200 Phaseolus vulgaris HOM05D007643 ORTHO05D007801 2.3e-78 295.4 145 100.0
Glyma.04G185600 Glycine max HOM05D007643 ORTHO05D007801 1.7e-57 226.1 142 80.3
Glyma.06G180500 Glycine max HOM05D007643 ORTHO05D007801 1.5e-53 213.0 173 67.6
Lalb_Chr23g0273871 Lupinus albus HOM05D007643 ORTHO05D007801 1.1e-40 170.2 144 61.1
Lj1g0019261 Lotus japonicus HOM05D007643 ORTHO05D007801 2.8e-39 165.6 152 61.8
arahy.Tifrunner.gnm1.ann1.Z569TI Arachis hypogaea HOM05D007643 ORTHO05D007801 4.9e-36 154.8 153 57.5
VMungo1309G0126 Vigna mungo HOM05D007643 ORTHO05D007801 1.9e-35 152.9 83 89.2
Medtr2g059060 Medicago truncatula HOM05D007643 ORTHO05D007801 3.2e-35 152.1 144 56.9
TPR.G15310 Trifolium pratense HOM05D007643 ORTHO05D007801 7.9e-34 147.5 136 55.1
Ca_26376_v3 Cicer arietinum L. HOM05D007643 ORTHO05D007801 5.6e-32 141.4 152 55.3
CiPaw.15G116100 Carya illinoinensis HOM05D007643 ORTHO05D007801 6.2e-31 137.9 156 52.6
Duzib068G1429 Durio zibethinus HOM05D007643 ORTHO05D007801 3.4e-29 132.1 151 47.7
Prupe.5G211300 Prunus persica HOM05D007643 ORTHO05D007801 2.9e-28 129.0 156 49.4
Psat1g029200 Pisum sativum HOM05D007643 ORTHO05D007801 3.8e-28 128.6 144 50.0
ClCG06G015360 Citrullus lanatus HOM05D007643 ORTHO05D007801 6.4e-28 127.9 143 49.0
CsaV3_1G003240 Cucumis sativus L. HOM05D007643 ORTHO05D007801 3.2e-27 125.6 143 49.0
Thecc.03G110800 Theobroma cacao HOM05D007643 ORTHO05D007801 9.3e-27 124.0 159 45.3
QL10p021414 Quercus lobata HOM05D007643 ORTHO05D007801 1.2e-26 123.6 142 49.3
RcHm_v2.0_Chr7g0183911 Rosa chinensis HOM05D007643 ORTHO05D007801 1.6e-26 123.2 154 49.4
Cfa019854 Carpinus fangiana HOM05D007643 ORTHO05D007801 5.1e-25 118.2 122 51.6
COL.COLO4_28832 Corchorus olitorius HOM05D007643 ORTHO05D007801 7.4e-24 114.4 155 45.2
Sed0015671 Sechium edule HOM05D007643 ORTHO05D007801 1.3e-23 113.6 143 44.8
FAN18G4512 Fragaria x ananassa HOM05D007643 ORTHO05D007801 8.2e-23 110.9 161 47.2
TWI15G0080 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 1.4e-22 110.2 131 45.8
Gohir.D11G038100 Gossypium hirsutum HOM05D007643 ORTHO05D007801 2.4e-22 109.4 160 43.8
Gorai.007G040800 Gossypium raimondii HOM05D007643 ORTHO05D007801 3.1e-22 109.0 160 43.8
MELO3C017259.2 Cucumis melo HOM05D007643 ORTHO05D007801 4.0e-22 108.6 88 59.1
FAN08G1142 Fragaria x ananassa HOM05D007643 ORTHO05D007801 4.0e-22 108.6 152 46.7
MD06G1206900 Malus domestica HOM05D007643 ORTHO05D007801 9.0e-22 107.5 157 44.6
MD14G1217500 Malus domestica HOM05D007643 ORTHO05D007801 2.6e-21 105.9 129 45.7
Actinidia35057 Actinidia chinensis HOM05D007643 ORTHO05D007801 4.5e-21 105.1 117 46.2
VMungo1309G2394 Vigna mungo HOM05D007643 ORTHO05D007801 4.5e-21 105.1 66 83.3
Ciclev10022625m.g Citrus clementina HOM05D007643 ORTHO05D007801 5.8e-21 104.8 134 39.6
TWI81G0573 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 7.6e-21 104.4 140 44.3
Actinidia18967 Actinidia chinensis HOM05D007643 ORTHO05D007801 2.9e-20 102.4 118 44.9
Gohir.D12G187200 Gossypium hirsutum HOM05D007643 ORTHO05D007801 2.9e-20 102.4 135 42.2
Gorai.008G200700 Gossypium raimondii HOM05D007643 ORTHO05D007801 4.9e-20 101.7 135 42.2
Eucgr.K02633 Eucalyptus grandis HOM05D007643 ORTHO05D007801 1.9e-19 99.8 142 41.5
CANSAT11G0293 Cannabis sativa HOM05D007643 ORTHO05D007801 3.2e-19 99.0 87 55.2
Gohir.A12G184500 Gossypium hirsutum HOM05D007643 ORTHO05D007801 4.6e-18 95.1 135 41.5
Dinv36824 Davidia involucrata HOM05D007643 ORTHO05D007801 2.3e-17 92.8 102 45.1
Manes.14G090200 Manihot esculenta HOM05D007643 ORTHO05D007801 2.3e-17 92.8 78 55.1
GSVIVG01008172001 Vitis vinifera HOM05D007643 ORTHO05D007801 5.1e-17 91.7 139 39.6
vmacro16469 Vaccinium macrocarpon HOM05D007643 ORTHO05D007801 2.5e-16 89.4 136 41.2
Dinv38625 Davidia involucrata HOM05D007643 ORTHO05D007801 4.3e-16 88.6 95 45.3
Rhsim12G0146900 Rhododendron simsii HOM05D000001 ORTHO05D000003 7.4e-16 87.8 113 42.5
Potri.012G065400 Populus trichocarpa HOM05D007643 ORTHO05D007801 9.7e-16 87.4 92 45.7
CSS0044770 Camellia sinensis var. sinensis HOM05D007643 ORTHO05D007801 1.3e-15 87.0 92 44.6
PGR044G0452 Punica granatum HOM05D007643 ORTHO05D007801 4.8e-15 85.1 139 38.1
Sabra12G0046800 Salix brachista HOM05D007643 ORTHO05D007801 8.2e-15 84.3 82 47.6
Manes.06G079602 Manihot esculenta HOM05D007643 ORTHO05D007801 1.4e-14 83.6 78 53.8
THA.LOC104800981 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 2.4e-14 82.8 114 40.4
Atru.chr9.639 Acer truncatum HOM05D007643 ORTHO05D007801 1.2e-13 80.5 94 41.5
ATR0691G209 Amborella trichopoda HOM05D007643 ORTHO05D007801 2.0e-13 79.7 111 39.6
PSO063G2669 Papaver somniferum HOM05D007643 ORTHO05D007801 2.6e-13 79.3 152 34.9
PSO782G0046 Papaver somniferum HOM05D007643 ORTHO05D007801 7.7e-13 77.8 142 34.5
Aa31LG11G2440 Aethionema arabicum HOM05D007643 ORTHO05D007801 1.7e-12 76.6 146 33.6
FvH4_5g13250 Fragaria vesca HOM05D007643 ORTHO05D007801 2.2e-12 76.3 112 46.4
Migut.G00548 Erythranthe guttata HOM05D007643 ORTHO05D007801 3.8e-12 75.5 99 39.4
THA.LOC104818362 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 3.8e-12 75.5 145 36.6
Nitab4.5_0002805g0050 Nicotiana tabacum HOM05D007643 ORTHO05D007801 8.5e-12 74.3 107 38.3
Peaxi162Scf00017g03267 Petunia axillaris HOM05D007643 ORTHO05D007801 2.5e-11 72.8 103 39.8
Oeu059396.1 Olea europaea HOM05D007643 ORTHO05D007801 7.2e-11 71.2 90 38.9
CAN.G982.32 Capsicum annuum HOM05D007643 ORTHO05D007801 1.2e-10 70.5 141 31.2
Aqoxy3G03786 Aquilegia oxysepala HOM05D007643 ORTHO05D007801 6.1e-10 68.2 112 35.7
MSTRG.9860 Avicennia marina HOM05D007643 ORTHO05D007801 7.9e-10 67.8 91 34.1
Nitab4.5_0000646g0290 Nicotiana tabacum HOM05D007643 ORTHO05D007801 1.0e-09 67.4 143 32.9
Sopen03g033740 Solanum pennellii HOM05D007643 ORTHO05D007801 2.3e-09 66.2 98 36.7
SGA_v2.0_scaffold67G22694 Striga asiatica HOM05D007643 ORTHO05D007801 2.3e-09 66.2 89 38.2
MSTRG.4170 Avicennia marina HOM05D007643 ORTHO05D007801 3.9e-09 65.5 125 33.6
Sp2g24160 Schrenkiella parvula HOM05D010173 ORTHO05D007801 6.7e-09 64.7 114 35.1
Thhalv10004975m.g Eutrema salsugineum HOM05D010173 ORTHO05D007801 1.1e-08 63.9 116 34.5
CDE02G0802 Ceratophyllum demersum HOM05D007643 ORTHO05D007801 1.5e-08 63.5 79 44.3
unitig_746.g26846 Utricularia gibba HOM05D007643 ORTHO05D007801 1.5e-08 63.5 88 35.2
PGSC0003DMG400024520 Solanum tuberosum HOM05D007643 ORTHO05D007801 2.0e-08 63.2 137 32.1
Nitab4.5_0004190g0030 Nicotiana tabacum HOM05D007643 ORTHO05D007801 2.5e-08 62.8 90 38.9
Nitab4.5_0002449g0120 Nicotiana tabacum HOM05D007643 ORTHO05D007801 9.7e-08 60.8 76 39.5
Cc04_g08010 Coffea canephora HOM05D007643 ORTHO05D007801 1.3e-07 60.5 147 32.0
SEGI_00634 Sequoiadendron giganteum HOM05D007643 ORTHO05D007801 1.3e-07 60.5 97 36.1
Nn3g17593 Nelumbo nucifera HOM05D007643 ORTHO05D007801 1.7e-07 60.1 63 42.9
AUR62039686 Chenopodium quinoa HOM05D007643 ORTHO05D007801 2.8e-07 59.3 87 36.8
AUR62032152 Chenopodium quinoa HOM05D007643 ORTHO05D007801 4.8e-07 58.5 87 36.8
FAN13G0443 Fragaria x ananassa HOM05D007643 ORTHO05D007801 4.8e-07 58.5 45 57.8
Os09g0473966 Oryza sativa ssp. japonica HOM05D007643 ORTHO05D007801 6.3e-07 58.2 65 49.2
Sed0026794 Sechium edule HOM05D007643 ORTHO05D007801 6.3e-07 58.2 86 41.9
Hund02541 Selenicereus undatus HOM05D007643 ORTHO05D007801 1.1e-06 57.4 150 30.0
Lsat_1_v5_gn_4_112541 Lactuca sativa HOM05D007643 ORTHO05D007801 1.4e-06 57.0 140 29.3
Ah.02g114340 Amaranthus hybridus HOM05D007643 ORTHO05D007801 2.4e-06 56.2 125 32.8
HPP92_019460 Vanilla planifolia HOM05D007643 ORTHO05D007801 5.3e-06 55.1 146 31.5


User provided reference genes

Program Settings