Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G172900 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 3.0e-195 684.9 323 100.0
Phvul.009G172800 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 5.2e-179 630.9 323 92.0
VMungo1309G2156 Vigna mungo HOM05D000434 ORTHO05D005992 7.5e-178 627.1 324 92.0
Glyma.06G176500 Glycine max HOM05D000434 ORTHO05D005992 7.8e-175 617.1 323 88.9
VMungo1309G2109 Vigna mungo HOM05D000434 ORTHO05D005992 2.3e-174 615.5 323 90.1
Glyma.06G176400 Glycine max HOM05D000434 ORTHO05D005992 3.2e-168 595.1 323 85.1
Phvul.009G172700 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 1.2e-167 593.2 323 86.1
VMungo1309G2813 Vigna mungo HOM05D000434 ORTHO05D005992 6.6e-166 587.4 323 85.1
LjContig00127g0004723 Lotus japonicus HOM05D000434 ORTHO05D005992 2.2e-161 572.4 320 82.2
Ca_16123_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 6.4e-161 570.9 318 84.3
Lalb_Chr08g0236831 Lupinus albus HOM05D000434 ORTHO05D005992 3.2e-160 568.5 321 80.7
Medtr3g076590 Medicago truncatula HOM05D000434 ORTHO05D005992 7.8e-159 563.9 318 83.6
Psat5g116720 Pisum sativum HOM05D000434 ORTHO05D005992 3.0e-158 562.0 310 84.2
Glyma.17G125000 Glycine max HOM05D000434 ORTHO05D005992 6.6e-158 560.8 321 81.0
Glyma.05G042300 Glycine max HOM05D000434 ORTHO05D005992 7.3e-157 557.4 321 80.1
Lalb_Chr07g0183021 Lupinus albus HOM05D000434 ORTHO05D005992 3.6e-156 555.1 321 79.8
TPR.G35602 Trifolium pratense HOM05D000434 ORTHO05D005992 4.8e-156 554.7 318 82.1
Prupe.5G164400 Prunus persica HOM05D000434 ORTHO05D005992 1.3e-153 546.6 321 76.6
Lj4g0020673 Lotus japonicus HOM05D000434 ORTHO05D005992 1.4e-152 543.1 322 78.3
Rhsim12G0168500 Rhododendron simsii HOM05D000434 ORTHO05D005992 1.9e-152 542.7 321 78.5
FAN08G0399 Fragaria x ananassa HOM05D000434 ORTHO05D005992 3.2e-152 542.0 323 76.8
FvH4_5g06420 Fragaria vesca HOM05D000434 ORTHO05D005992 4.2e-152 541.6 323 76.5
FAN18G2656 Fragaria x ananassa HOM05D000434 ORTHO05D005992 4.2e-152 541.6 323 76.5
Lalb_Chr13g0297571 Lupinus albus HOM05D000434 ORTHO05D005992 4.2e-152 541.6 320 77.8
MD14G1170200 Malus domestica HOM05D000434 ORTHO05D005992 5.4e-152 541.2 321 76.0
FAN04G1602 Fragaria x ananassa HOM05D000434 ORTHO05D005992 9.3e-152 540.4 323 76.5
Ca_19422_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 2.7e-151 538.9 308 80.2
Cfa019231 Carpinus fangiana HOM05D000434 ORTHO05D005992 7.9e-151 537.3 319 76.2
Haze_07598 Corylus avellana HOM05D000434 ORTHO05D005992 1.3e-150 536.6 321 75.4
Phvul.003G206000 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 3.9e-150 535.0 312 79.8
PGR083G1106 Punica granatum HOM05D000434 ORTHO05D005992 3.9e-150 535.0 321 76.6
TPR.G37491 Trifolium pratense HOM05D000434 ORTHO05D007220 6.7e-150 534.3 319 76.2
arahy.Tifrunner.gnm1.ann1.Z1M7DP Arachis hypogaea HOM05D000434 ORTHO05D005992 8.7e-150 533.9 320 77.8
arahy.Tifrunner.gnm1.ann1.D0ANT3 Arachis hypogaea HOM05D000434 ORTHO05D005992 1.1e-149 533.5 320 77.5
TAR622G0355 Trochodendron aralioides HOM05D000434 ORTHO05D005992 5.6e-149 531.2 322 75.2
GSVIVG01007623001 Vitis vinifera HOM05D000434 ORTHO05D005992 7.4e-149 530.8 321 76.6
RcHm_v2.0_Chr7g0192361 Rosa chinensis HOM05D000434 ORTHO05D005992 1.6e-148 529.6 319 76.2
CSS0032276 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 2.8e-148 528.9 319 74.6
Ciclev10021198m.g Citrus clementina HOM05D000434 ORTHO05D005992 1.1e-147 526.9 321 75.7
VMungo1215G0774 Vigna mungo HOM05D000434 ORTHO05D005992 1.1e-147 526.9 319 76.2
CANSAT80G1313 Cannabis sativa HOM05D000434 ORTHO05D005992 5.3e-147 524.6 320 72.8
CANSAT80G2029 Cannabis sativa HOM05D000434 ORTHO05D005992 5.3e-147 524.6 320 74.4
Lj5P131T21 Lonicera japonica HOM05D000434 ORTHO05D005992 9.0e-147 523.9 306 75.8
Medtr4g104690 Medicago truncatula HOM05D000434 ORTHO05D005992 5.8e-146 521.2 306 77.5
QL10p006660 Quercus lobata HOM05D000434 ORTHO05D005992 7.6e-146 520.8 306 76.5
COL.COLO4_21936 Corchorus olitorius HOM05D000434 ORTHO05D005992 9.9e-146 520.4 307 76.9
CiPaw.12G032200 Carya illinoinensis HOM05D000434 ORTHO05D005992 1.9e-144 516.2 323 72.4
Cc04_g11350 Coffea canephora HOM05D000434 ORTHO05D005992 3.2e-144 515.4 319 72.7
Psat4g061720 Pisum sativum HOM05D000434 ORTHO05D005992 3.2e-144 515.4 306 75.2
Oeu036498.1 Olea europaea HOM05D000434 ORTHO05D005992 4.2e-144 515.0 319 73.7
Duzib068G0672 Durio zibethinus HOM05D000434 ORTHO05D005992 7.1e-144 514.2 322 74.5
TWI39G0022 Tripterygium wilfordii HOM05D000434 ORTHO05D005992 1.2e-143 513.5 319 73.7
Gohir.A03G074900 Gossypium hirsutum HOM05D000434 ORTHO05D005992 4.6e-143 511.5 308 75.6
DCAR_007452 Daucus carota HOM05D000434 ORTHO05D007220 7.9e-143 510.8 320 73.1
Nn4g22577 Nelumbo nucifera HOM05D000434 ORTHO05D005992 1.0e-142 510.4 319 72.7
EL10Ac7g17989 Beta vulgaris HOM05D000434 ORTHO05D005992 3.0e-142 508.8 314 73.6
Cpa.g.sc968.1 Carica papaya HOM05D000434 ORTHO05D005992 3.0e-142 508.8 319 73.4
CsaV3_1G008920 Cucumis sativus L. HOM05D000434 ORTHO05D005992 3.0e-142 508.8 320 73.1
Potri.012G089400 Populus trichocarpa HOM05D000434 ORTHO05D005992 3.9e-142 508.4 321 73.8
Aqoxy5G03716 Aquilegia oxysepala HOM05D000434 ORTHO05D005992 5.1e-142 508.1 319 72.4
COL.COLO4_20637 Corchorus olitorius HOM05D000434 ORTHO05D005992 5.1e-142 508.1 307 75.6
ClCG03G003070 Citrullus lanatus HOM05D000434 ORTHO05D005992 8.7e-142 507.3 320 73.1
Thecc.03G116300 Theobroma cacao HOM05D000434 ORTHO05D005992 1.9e-141 506.1 309 75.4
MELO3C002306.2 Cucumis melo HOM05D000434 ORTHO05D005992 3.3e-141 505.4 320 72.8
MBI06_g22722_MAGBIO Magnolia biondii HOM05D000434 ORTHO05D005992 4.3e-141 505.0 306 74.5
Gorai.008G202000 Gossypium raimondii HOM05D000434 ORTHO05D005992 5.6e-141 504.6 318 74.5
Nitab4.5_0008037g0030 Nicotiana tabacum HOM05D000434 ORTHO05D005992 5.6e-141 504.6 307 73.6
Eucgr.B00212 Eucalyptus grandis HOM05D000434 ORTHO05D005992 7.4e-141 504.2 319 72.1
Sopen03g031180 Solanum pennellii HOM05D000434 ORTHO05D005992 7.4e-141 504.2 306 73.5
ECA232G2851 Erigeron canadensis HOM05D000434 ORTHO05D005992 9.6e-141 503.8 314 72.3
Solyc03g112080.1 Solanum lycopersicum HOM05D000434 ORTHO05D005992 9.6e-141 503.8 306 73.5
Sed0014341 Sechium edule HOM05D000434 ORTHO05D005992 1.3e-140 503.4 320 73.4
PGSC0003DMG400018193 Solanum tuberosum HOM05D000434 ORTHO05D005992 1.3e-140 503.4 306 73.5
Peaxi162Scf00801g00033 Petunia axillaris HOM05D000434 ORTHO05D005992 1.6e-140 503.1 319 72.1
Nitab4.5_0002522g0080 Nicotiana tabacum HOM05D000434 ORTHO05D005992 6.2e-140 501.1 307 73.0
AUR62022129 Chenopodium quinoa HOM05D000434 ORTHO05D005992 1.4e-139 500.0 306 73.2
Gohir.A12G185500 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.4e-139 500.0 308 74.4
Nitab4.5_0001243g0040 Nicotiana tabacum HOM05D000434 ORTHO05D005992 1.4e-139 500.0 320 71.9
Manes.06G111500 Manihot esculenta HOM05D000434 ORTHO05D005992 1.8e-139 499.6 321 72.3
Ah.08g218690 Amaranthus hybridus HOM05D000434 ORTHO05D007220 2.4e-139 499.2 306 74.5
CAN.G126.46 Capsicum annuum HOM05D000434 ORTHO05D005992 4.0e-139 498.4 306 72.2
AUR62001199 Chenopodium quinoa HOM05D000434 ORTHO05D005992 4.0e-139 498.4 306 72.9
Sc04g0001380 Simmondsia chinensis HOM05D000434 ORTHO05D005992 4.0e-139 498.4 315 73.3
Peaxi162Scf00089g01220 Petunia axillaris HOM05D000434 ORTHO05D005992 4.5e-138 495.0 304 73.0
Sabra12G0064400 Salix brachista HOM05D000434 ORTHO05D005992 5.8e-138 494.6 316 72.2
SEGI_02641 Sequoiadendron giganteum HOM05D000434 ORTHO05D005992 5.8e-138 494.6 319 71.5
SGA_v2.0_scaffold90G27827 Striga asiatica HOM05D000434 ORTHO05D005992 1.7e-137 493.0 311 70.1
MSTRG.4348 Avicennia marina HOM05D000434 ORTHO05D005992 2.9e-137 492.3 316 70.6
Nitab4.5_0000025g0390 Nicotiana tabacum HOM05D000434 ORTHO05D005992 2.9e-137 492.3 320 70.6
ATR0122G026 Amborella trichopoda HOM05D000434 ORTHO05D005992 3.2e-136 488.8 319 69.0
Thhalv10025788m.g Eutrema salsugineum HOM05D000434 ORTHO05D005992 5.5e-136 488.0 309 70.9
Gohir.D12G188284 Gossypium hirsutum HOM05D000434 ORTHO05D005992 7.1e-136 487.6 306 74.8
THA.LOC104824991 Tarenaya hassleriana HOM05D000434 ORTHO05D005992 1.6e-135 486.5 315 70.5
AT4G24730 Arabidopsis thaliana HOM05D000434 ORTHO05D005992 4.6e-135 485.0 309 70.9
SalBow5G1452 Salvia bowleyana HOM05D000434 ORTHO05D005992 4.6e-135 485.0 306 71.6
SalBow5G5274 Salvia bowleyana HOM05D000434 ORTHO05D005992 4.6e-135 485.0 306 71.6
SGA_v2.0_scaffold114G31805 Striga asiatica HOM05D000434 ORTHO05D005992 4.6e-135 485.0 308 71.1
HanXRQChr09g0272611 Helianthus annuus HOM05D000434 ORTHO05D005992 6.0e-135 484.6 314 70.1
Atru.chr9.2595 Acer truncatum HOM05D000434 ORTHO05D005992 7.9e-135 484.2 321 72.0
BraA01t01541Z Brassica rapa HOM05D000434 ORTHO05D001445 1.8e-134 483.0 311 70.1
A01p16060 Brassica napus HOM05D000434 ORTHO05D005992 3.0e-134 482.3 311 69.8
Sp7g22710 Schrenkiella parvula HOM05D000434 ORTHO05D005992 5.1e-134 481.5 309 70.2
AL7G28460 Arabidopsis lyrata HOM05D000434 ORTHO05D005992 1.1e-133 480.3 309 70.2
CARHR232100 Cardamine hirsuta HOM05D000434 ORTHO05D005992 1.5e-133 479.9 309 70.2
C01p20050 Brassica napus HOM05D000434 ORTHO05D001445 3.3e-133 478.8 311 69.8
Os07g0688000 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 3.3e-133 478.8 321 67.6
Aa31LG7G11140 Aethionema arabicum HOM05D000434 ORTHO05D005992 9.6e-133 477.2 309 68.9
BolC1t01932H Brassica oleracea HOM05D000434 ORTHO05D001445 2.8e-132 475.7 311 69.8
Carub.0007s1633 Capsella rubella HOM05D000434 ORTHO05D005992 2.8e-132 475.7 309 69.6
HPP92_004599 Vanilla planifolia HOM05D000434 ORTHO05D005992 6.3e-132 474.6 321 69.2
Migut.O00171 Erythranthe guttata HOM05D000434 ORTHO05D005992 1.1e-131 473.8 319 66.1
Oeu044591.1 Olea europaea HOM05D000434 ORTHO05D005992 1.4e-131 473.4 319 68.7
Zm00001eb306980 Zea mays HOM05D000434 ORTHO05D005992 1.8e-131 473.0 319 67.4
SalBow5G4047 Salvia bowleyana HOM05D000434 ORTHO05D005992 2.4e-131 472.6 296 72.0
SalBow5G0725 Salvia bowleyana HOM05D000434 ORTHO05D005992 4.1e-131 471.9 306 71.2
Migut.D02023 Erythranthe guttata HOM05D000434 ORTHO05D005992 6.9e-131 471.1 306 69.3
Gorai.003G107100 Gossypium raimondii HOM05D000434 ORTHO05D005992 7.6e-130 467.6 302 73.2
Lsat_1_v5_gn_4_79260 Lactuca sativa HOM05D000434 ORTHO05D005992 7.6e-130 467.6 314 67.2
Aa31LG7G11150 Aethionema arabicum HOM05D000434 ORTHO05D005992 1.3e-129 466.8 309 67.6
Gohir.D03G101700 Gossypium hirsutum HOM05D000434 ORTHO05D005992 5.0e-129 464.9 302 72.8
CDE09G0062 Ceratophyllum demersum HOM05D000434 ORTHO05D005992 4.6e-127 458.4 305 65.2
HanXRQChr05g0154811 Helianthus annuus HOM05D000434 ORTHO05D005992 1.9e-125 453.0 312 67.6
BcaC09g50836 Brassica carinata HOM05D000434 ORTHO05D001445 2.8e-124 449.1 311 66.9
Zm00001eb176220 Zea mays HOM05D000434 ORTHO05D005992 1.5e-122 443.4 313 63.3
PSO754G0021 Papaver somniferum HOM05D000434 ORTHO05D005992 1.0e-121 440.7 273 72.2
Os08g0557200 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 1.3e-121 440.3 312 64.1
HanXRQChr02g0032551 Helianthus annuus HOM05D000434 ORTHO05D005992 1.1e-120 437.2 312 64.7
unitig_22.g6297 Utricularia gibba HOM05D000434 ORTHO05D005992 7.9e-119 431.0 277 71.1
Pp3c23_9280 Physcomitrium patens HOM05D000434 ORTHO05D005992 4.8e-116 421.8 306 58.5
Pp3c15_10910 Physcomitrium patens HOM05D000434 ORTHO05D005992 1.8e-115 419.9 310 59.4
Sed0024178 Sechium edule HOM05D000434 ORTHO05D005992 1.5e-114 416.8 319 61.8
Migut.L00359 Erythranthe guttata HOM05D000434 ORTHO05D005992 2.6e-114 416.0 282 67.4
AUR62028295 Chenopodium quinoa HOM05D000434 ORTHO05D005992 5.5e-112 408.3 305 62.6
CBR_g48132 Chara braunii HOM05D000434 ORTHO05D005992 7.4e-109 397.9 307 57.0
Gohir.D12G188312 Gossypium hirsutum HOM05D000434 ORTHO05D005992 3.1e-107 392.5 318 62.9
Gorai.008G202100 Gossypium raimondii HOM05D000434 ORTHO05D005992 3.1e-107 392.5 318 62.9
Mapoly0153s0032 Marchantia polymorpha HOM05D000434 ORTHO05D005992 1.5e-104 383.6 304 57.2
CSS0026928 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 1.8e-102 376.7 218 74.8
Sabra15G0108100 Salix brachista HOM05D000434 ORTHO05D005992 5.7e-101 371.7 223 74.4
Migut.L00543 Erythranthe guttata HOM05D000434 ORTHO05D005992 3.7e-100 369.0 297 60.9
SHI03475 Sapria himalayana HOM05D000434 ORTHO05D005992 1.8e-94 350.1 314 54.5
SMO361G0760 Selaginella moellendorffii HOM05D000434 ORTHO05D005992 1.2e-90 337.4 310 51.3
ECA233G1405 Erigeron canadensis HOM05D000434 ORTHO05D005992 5.6e-80 302.0 270 55.9
SalBow5G4235 Salvia bowleyana HOM05D000434 ORTHO05D005992 8.0e-71 271.6 316 45.9
HanXRQChr09g0263851 Helianthus annuus HOM05D000434 ORTHO05D005992 1.7e-68 263.8 177 68.9
SalBow5G1355 Salvia bowleyana HOM05D000434 ORTHO05D005992 2.8e-63 246.5 261 51.3
HPP92_020252 Vanilla planifolia HOM05D000434 ORTHO05D005992 8.4e-52 208.4 128 69.5
Potri.015G085232 Populus trichocarpa HOM05D000434 ORTHO05D005992 6.2e-47 192.2 134 70.9
Mapoly0043s0121 Marchantia polymorpha HOM05D000434 ORTHO05D005992 1.1e-43 181.4 310 36.5
Gohir.A12G185600 Gossypium hirsutum HOM05D000434 ORTHO05D005992 5.6e-40 169.1 114 71.9
MCO10G403 Micromonas commoda HOM05D000434 ORTHO05D005992 4.0e-38 162.9 304 33.2
AagrBONN_evm.TU.Sc2ySwM_368.1237 Anthoceros agrestis HOM05D000434 ORTHO05D005992 1.1e-30 138.3 248 36.7
MCO14G418 Micromonas commoda HOM05D000434 ORTHO05D005992 1.7e-28 131.0 341 29.0
Pp3c2_17660 Physcomitrium patens HOM05D000434 ORTHO05D005992 6.4e-28 129.0 95 56.8
HPP92_020253 Vanilla planifolia HOM05D000434 ORTHO05D005992 2.6e-13 80.5 59 66.1
Oeu057324.1 Olea europaea HOM05D000434 ORTHO05D005992 4.2e-11 73.2 74 52.7


User provided reference genes

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