Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G165600 Phaseolus vulgaris HOM05D005391 ORTHO05D006694 1.8e-75 286.2 182 100.0
Glyma.04G196600 Glycine max HOM05D005391 ORTHO05D006694 7.5e-58 227.6 181 79.0
Ca_16053_v3 Cicer arietinum L. HOM05D005391 ORTHO05D006694 2.4e-56 222.6 185 71.9
TPR.G14215 Trifolium pratense HOM05D005391 ORTHO05D006694 3.9e-54 215.3 185 66.5
Medtr3g099130 Medicago truncatula HOM05D005391 ORTHO05D006694 2.5e-53 212.6 182 67.0
Psat5g051960 Pisum sativum HOM05D005391 ORTHO05D006694 1.8e-51 206.5 183 63.9
Glyma.06G169200 Glycine max HOM05D005391 ORTHO05D006694 1.5e-50 203.4 182 70.3
Lalb_Chr23g0273681 Lupinus albus HOM05D005391 ORTHO05D006694 5.8e-50 201.4 184 66.8
Lj1g0005006 Lotus japonicus HOM05D005391 ORTHO05D006694 1.3e-49 200.3 182 63.7
arahy.Tifrunner.gnm1.ann1.S11VKX Arachis hypogaea HOM05D005391 ORTHO05D006694 2.0e-47 193.0 202 71.3
Gohir.D07G055100 Gossypium hirsutum HOM05D005391 ORTHO05D006694 1.5e-45 186.8 182 59.3
Gorai.001G058300 Gossypium raimondii HOM05D005391 ORTHO05D006694 1.5e-45 186.8 182 59.3
arahy.Tifrunner.gnm1.ann1.3A01UJ Arachis hypogaea HOM05D005391 ORTHO05D006694 3.3e-45 185.7 210 68.6
Gohir.A07G050600 Gossypium hirsutum HOM05D005391 ORTHO05D006694 3.3e-45 185.7 182 58.8
Thecc.03G130500 Theobroma cacao HOM05D005391 ORTHO05D006694 3.6e-44 182.2 197 60.9
CSS0003205 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 8.1e-44 181.0 187 67.9
CSS0033680 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 8.1e-44 181.0 187 67.9
CSS0043065 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 1.8e-43 179.9 191 58.6
CiPaw.12G044000 Carya illinoinensis HOM05D005391 ORTHO05D006694 3.1e-43 179.1 198 54.0
Dinv23158 Davidia involucrata HOM05D005391 ORTHO05D006694 6.8e-43 177.9 180 63.9
COL.COLO4_28143 Corchorus olitorius HOM05D005391 ORTHO05D006694 8.9e-43 177.6 185 57.3
vmacro16727 Vaccinium macrocarpon HOM05D005391 ORTHO05D006694 3.4e-42 175.6 182 58.8
MD15G1005900 Malus domestica HOM05D005391 ORTHO05D006694 5.8e-42 174.9 195 55.9
FAN27G0224 Fragaria x ananassa HOM05D005391 ORTHO05D006694 7.5e-42 174.5 185 55.1
FvH4_2g37750 Fragaria vesca HOM05D005391 ORTHO05D006694 9.8e-42 174.1 185 55.1
Cpa.g.sc13.100 Carica papaya HOM05D005391 ORTHO05D006694 1.3e-41 173.7 197 54.3
Atru.chr6.1808 Acer truncatum HOM05D005391 ORTHO05D006694 1.7e-41 173.3 185 57.3
MD08G1006700 Malus domestica HOM05D005391 ORTHO05D006694 1.7e-41 173.3 196 55.1
Potri.015G097800 Populus trichocarpa HOM05D005391 ORTHO05D006694 2.2e-41 172.9 183 56.8
arahy.Tifrunner.gnm1.ann1.CP8X4X Arachis hypogaea HOM05D005391 ORTHO05D006694 2.9e-41 172.6 244 59.0
arahy.Tifrunner.gnm1.ann1.HT4698 Arachis hypogaea HOM05D005391 ORTHO05D006694 2.9e-41 172.6 244 59.0
Prupe.1G358600 Prunus persica HOM05D005391 ORTHO05D006694 2.9e-41 172.6 181 59.7
Potri.012G099200 Populus trichocarpa HOM05D005391 ORTHO05D006694 3.7e-41 172.2 174 62.1
Duzib205G0229 Durio zibethinus HOM05D005391 ORTHO05D006694 4.9e-41 171.8 203 58.6
FAN15G0439 Fragaria x ananassa HOM05D005391 ORTHO05D006694 6.4e-41 171.4 184 55.4
MBI07_g28244_MAGBIO Magnolia biondii HOM05D005391 ORTHO05D006694 8.3e-41 171.0 171 60.2
Actinidia36818 Actinidia chinensis HOM05D005391 ORTHO05D006694 1.1e-40 170.6 176 57.4
RcHm_v2.0_Chr6g0303761 Rosa chinensis HOM05D005391 ORTHO05D006694 1.1e-40 170.6 195 61.0
CiPaw.11G006200 Carya illinoinensis HOM05D005391 ORTHO05D006694 1.4e-40 170.2 196 56.1
Ciclev10032864m.g Citrus clementina HOM05D005391 ORTHO05D006694 1.4e-40 170.2 188 62.8
FAN20G0870 Fragaria x ananassa HOM05D005391 ORTHO05D006694 1.4e-40 170.2 184 54.3
Manes.14G050400 Manihot esculenta HOM05D005391 ORTHO05D006694 3.2e-40 169.1 206 51.0
Sabra12G0072400 Salix brachista HOM05D005391 ORTHO05D006694 3.2e-40 169.1 178 59.0
TAR629G0488 Trochodendron aralioides HOM05D005391 ORTHO05D006694 1.2e-39 167.2 178 54.5
Cfa018784 Carpinus fangiana HOM05D005391 ORTHO05D006694 2.7e-39 166.0 197 65.0
TAR371G0831 Trochodendron aralioides HOM05D005391 ORTHO05D006694 2.7e-39 166.0 175 54.9
Nn3g16438 Nelumbo nucifera HOM05D005391 ORTHO05D006694 3.5e-39 165.6 186 53.2
Sed0002904 Sechium edule HOM05D005391 ORTHO05D006694 4.6e-39 165.2 190 51.1
VMungo1309G0665 Vigna mungo HOM05D005391 ORTHO05D006694 1.0e-38 164.1 123 90.2
Haze_07152 Corylus avellana HOM05D005391 ORTHO05D006694 2.3e-38 162.9 197 64.5
Nn4g22289 Nelumbo nucifera HOM05D005391 ORTHO05D006694 2.3e-38 162.9 177 55.9
Peaxi162Scf00045g01932 Petunia axillaris HOM05D005391 ORTHO05D006694 3.0e-38 162.5 185 50.3
TWI23G0649 Tripterygium wilfordii HOM05D005391 ORTHO05D006694 5.1e-38 161.8 186 51.6
MELO3C026202.2 Cucumis melo HOM05D005391 ORTHO05D006694 6.6e-38 161.4 200 51.0
CsaV3_1G000500 Cucumis sativus L. HOM05D005391 ORTHO05D006694 6.6e-38 161.4 200 53.0
Rhsim12G0176000 Rhododendron simsii HOM05D005391 ORTHO05D006694 8.6e-38 161.0 184 55.4
CANSAT80G1472 Cannabis sativa HOM05D005391 ORTHO05D006694 1.5e-37 160.2 194 50.5
Lsat_1_v5_gn_4_81240 Lactuca sativa HOM05D005391 ORTHO05D006694 4.3e-37 158.7 177 53.7
FAN26G2573 Fragaria x ananassa HOM05D005391 ORTHO05D006694 7.3e-37 157.9 183 53.0
Sabra15G0118500 Salix brachista HOM05D005391 ORTHO05D006694 7.3e-37 157.9 195 51.8
PSO478G3696 Papaver somniferum HOM05D005391 ORTHO05D006694 2.1e-36 156.4 176 54.5
QL10p002677 Quercus lobata HOM05D005391 ORTHO05D006694 2.1e-36 156.4 186 66.1
THA.LOC104798944 Tarenaya hassleriana HOM05D005391 ORTHO05D006694 2.1e-36 156.4 185 51.4
PSO017G3900 Papaver somniferum HOM05D005391 ORTHO05D006694 3.6e-36 155.6 176 54.0
TWI14G1436 Tripterygium wilfordii HOM05D005391 ORTHO05D006694 3.6e-36 155.6 186 50.5
CARHR277330 Cardamine hirsuta HOM05D005391 ORTHO05D006694 1.1e-35 154.1 172 53.5
PGSC0003DMG400026284 Solanum tuberosum HOM05D005391 ORTHO05D006694 1.1e-35 154.1 195 49.2
AUR62002017 Chenopodium quinoa HOM05D005391 ORTHO05D006694 1.4e-35 153.7 172 52.3
Nitab4.5_0000264g0120 Nicotiana tabacum HOM05D005391 ORTHO05D006694 1.4e-35 153.7 187 49.2
ECA232G1626 Erigeron canadensis HOM05D005391 ORTHO05D006694 1.8e-35 153.3 180 51.7
DCAR_016386 Daucus carota HOM05D005391 ORTHO05D006694 3.1e-35 152.5 181 54.1
Solyc08g006670.3 Solanum lycopersicum HOM05D005391 ORTHO05D006694 8.9e-35 151.0 195 59.5
Sopen08g002620 Solanum pennellii HOM05D005391 ORTHO05D006694 8.9e-35 151.0 195 59.5
Hund08624 Selenicereus undatus HOM05D005391 ORTHO05D006694 1.2e-34 150.6 178 51.7
Aa31LG1G18560 Aethionema arabicum HOM05D005391 ORTHO05D006694 1.5e-34 150.2 198 48.5
AUR62003784 Chenopodium quinoa HOM05D005391 ORTHO05D006694 1.5e-34 150.2 185 49.2
Oeu009657.1 Olea europaea HOM05D005391 ORTHO05D006694 2.0e-34 149.8 202 56.4
BolC3t18550H Brassica oleracea HOM05D005391 ORTHO05D006694 3.4e-34 149.1 191 49.2
A06p30110 Brassica napus HOM05D005391 ORTHO05D006694 4.4e-34 148.7 191 49.2
C03p62960 Brassica napus HOM05D005391 ORTHO05D006694 4.4e-34 148.7 191 49.2
BraA06t25962Z Brassica rapa HOM05D005391 ORTHO05D006694 4.4e-34 148.7 191 49.2
MSTRG.25825 Avicennia marina HOM05D005391 ORTHO05D006694 5.8e-34 148.3 202 53.0
Ah.03g143420 Amaranthus hybridus HOM05D005391 ORTHO05D006694 7.6e-34 147.9 179 52.0
Sp2g26560 Schrenkiella parvula HOM05D005391 ORTHO05D006694 7.6e-34 147.9 176 51.1
GSVIVG01008565001 Vitis vinifera HOM05D005391 ORTHO05D006694 1.7e-33 146.7 173 59.0
Lj5A95T81 Lonicera japonica HOM05D005391 ORTHO05D006694 2.2e-33 146.4 204 54.4
BcaB02g09758 Brassica carinata HOM05D005391 ORTHO05D006694 2.9e-33 146.0 172 61.6
Cc08_g07550 Coffea canephora HOM05D005391 ORTHO05D006694 3.8e-33 145.6 195 49.2
Thhalv10004987m.g Eutrema salsugineum HOM05D005391 ORTHO05D006694 3.8e-33 145.6 182 56.0
EL10Ac6g15093 Beta vulgaris HOM05D005391 ORTHO05D006694 8.4e-33 144.4 174 48.3
AL8G40540 Arabidopsis lyrata HOM05D005391 ORTHO05D006694 1.2e-31 140.6 178 48.9
A09p08280 Brassica napus HOM05D005391 ORTHO05D006694 1.6e-31 140.2 170 50.6
AT5G63480 Arabidopsis thaliana HOM05D005391 ORTHO05D006694 3.5e-31 139.0 178 62.9
unitig_32.g10935 Utricularia gibba HOM05D005391 ORTHO05D006694 3.5e-31 139.0 202 45.5
Aqoxy3G00618 Aquilegia oxysepala HOM05D005391 ORTHO05D006694 4.6e-31 138.7 182 62.1
BraA09t36478Z Brassica rapa HOM05D005391 ORTHO05D006694 6.0e-31 138.3 170 50.0
BcaB04g19920 Brassica carinata HOM05D005391 ORTHO05D006694 7.8e-31 137.9 173 46.2
SalBow8G3527 Salvia bowleyana HOM05D005391 ORTHO05D006694 7.8e-31 137.9 187 59.4
Carub.0008s2418 Capsella rubella HOM05D005391 ORTHO05D006694 1.7e-30 136.7 189 47.6
CDE10G0912 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 1.7e-30 136.7 171 48.5
ClCG06G017970 Citrullus lanatus HOM05D005391 ORTHO05D006694 6.6e-30 134.8 249 40.6
Migut.E01449 Erythranthe guttata HOM05D005391 ORTHO05D006694 6.6e-30 134.8 191 43.5
Aqoxy3G01572 Aquilegia oxysepala HOM05D005391 ORTHO05D006694 8.6e-30 134.4 178 48.9
CDE04G2377 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 8.6e-30 134.4 171 49.7
SGA_v2.0_scaffold169G38603 Striga asiatica HOM05D005391 ORTHO05D006694 8.6e-30 134.4 180 51.1
ATR0171G017 Amborella trichopoda HOM05D005391 ORTHO05D006694 4.3e-29 132.1 173 47.4
Ca_01190_v3 Cicer arietinum L. HOM05D005391 ORTHO05D006694 4.7e-28 128.6 98 72.4
Zm00001eb421130 Zea mays HOM05D005391 ORTHO05D006694 6.2e-28 128.3 173 47.4
BolC9t53848H Brassica oleracea HOM05D005391 ORTHO05D006694 8.1e-28 127.9 164 49.4
Actinidia08882 Actinidia chinensis HOM05D005391 ORTHO05D006694 6.9e-27 124.8 146 52.1
BcaC04g23332 Brassica carinata HOM05D005391 ORTHO05D006694 5.8e-26 121.7 164 48.8
C09p09360 Brassica napus HOM05D005391 ORTHO05D006694 5.8e-26 121.7 164 48.8
Nitab4.5_0001362g0010 Nicotiana tabacum HOM05D005391 ORTHO05D006694 3.8e-25 119.0 194 54.1
HanXRQChr09g0273301 Helianthus annuus HOM05D005391 ORTHO05D006694 9.3e-24 114.4 144 47.9
FAN23G2258 Fragaria x ananassa HOM05D005391 ORTHO05D006694 1.6e-23 113.6 160 46.2
SEGI_01116 Sequoiadendron giganteum HOM05D005391 ORTHO05D006694 8.7e-22 107.8 179 42.5
CSS0010891 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 1.9e-21 106.7 120 54.2
Ah.07g204620 Amaranthus hybridus HOM05D005391 ORTHO05D006694 4.3e-21 105.5 147 47.6
HPP92_023119 Vanilla planifolia HOM05D005391 ORTHO05D006694 2.1e-20 103.2 172 41.3
Oeu040668.1 Olea europaea HOM05D005391 ORTHO05D006694 6.2e-20 101.7 151 45.7
FAN23G0903 Fragaria x ananassa HOM05D005391 ORTHO05D006694 3.1e-19 99.4 181 42.0
Mapoly0007s0225 Marchantia polymorpha HOM05D005391 ORTHO05D006694 2.2e-17 93.2 178 35.4
Sc04g0000550 Simmondsia chinensis HOM05D005391 ORTHO05D006694 4.9e-17 92.0 135 44.4
DCAR_021623 Daucus carota HOM05D005391 ORTHO05D006694 1.1e-16 90.9 169 34.9
Pp3c7_3280 Physcomitrium patens HOM05D005391 ORTHO05D006694 4.2e-16 89.0 179 34.6
AagrBONN_evm.TU.Sc2ySwM_369.268 Anthoceros agrestis HOM05D005391 ORTHO05D006694 2.7e-15 86.3 182 35.2
Gohir.1Z049409 Gossypium hirsutum HOM05D005391 ORTHO05D006694 3.5e-15 85.9 126 42.9
SMO364G0653 Selaginella moellendorffii HOM05D005391 ORTHO05D006694 3.5e-15 85.9 161 36.0
Os04g0388601 Oryza sativa ssp. japonica HOM05D005391 ORTHO05D006694 1.8e-14 83.6 163 50.9
CSS0049043 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 8.1e-12 74.7 67 62.7
Zm00001eb085410 Zea mays HOM05D005391 ORTHO05D006694 5.3e-11 72.0 109 64.2
SEGI_13536 Sequoiadendron giganteum HOM05D005391 ORTHO05D006694 8.4e-09 64.7 142 33.1
Hund13632 Selenicereus undatus HOM05D005391 ORTHO05D006694 1.3e-06 57.4 153 31.4


User provided reference genes

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