Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G159800 Phaseolus vulgaris HOM05D004337 ORTHO05D005422 0.0e+00 1184.5 594 100.0
VMungo1309G0234 Vigna mungo HOM05D004337 ORTHO05D005422 0.0e+00 1127.9 594 94.3
Glyma.04G203800 Glycine max HOM05D004337 ORTHO05D005422 0.0e+00 1099.3 594 92.1
Glyma.06G161400 Glycine max HOM05D004337 ORTHO05D005422 0.0e+00 1080.5 584 92.0
arahy.Tifrunner.gnm1.ann1.X1BSDH Arachis hypogaea HOM05D004337 ORTHO05D005422 1.8e-302 1042.0 569 89.1
Lj1g0000957 Lotus japonicus HOM05D004337 ORTHO05D005422 1.6e-295 1018.8 598 85.1
arahy.Tifrunner.gnm1.ann1.397MFZ Arachis hypogaea HOM05D004337 ORTHO05D005422 2.4e-294 1015.0 609 83.3
Psat5g057120 Pisum sativum HOM05D004337 ORTHO05D005422 4.9e-292 1007.3 598 84.3
TPR.G7800 Trifolium pratense HOM05D004337 ORTHO05D005422 2.4e-291 1005.0 599 83.6
Medtr3g098210 Medicago truncatula HOM05D004337 ORTHO05D005422 3.9e-289 997.7 601 83.4
Ca_17042_v3 Cicer arietinum L. HOM05D004337 ORTHO05D005422 1.1e-288 996.1 598 84.9
Lalb_Chr07g0183961 Lupinus albus HOM05D004337 ORTHO05D005422 1.4e-278 962.6 602 80.2
Gohir.A05G375100 Gossypium hirsutum HOM05D004337 ORTHO05D005422 1.8e-278 962.2 574 81.0
CiPaw.15G184900 Carya illinoinensis HOM05D004337 ORTHO05D005422 6.9e-278 960.3 602 79.6
Gohir.D04G040600 Gossypium hirsutum HOM05D004337 ORTHO05D005422 9.0e-278 959.9 574 81.0
Gorai.012G045800 Gossypium raimondii HOM05D004337 ORTHO05D005422 9.0e-278 959.9 574 81.0
Lalb_Chr12g0202711 Lupinus albus HOM05D004337 ORTHO05D005422 1.7e-276 955.7 602 79.9
Cfa020919 Carpinus fangiana HOM05D004337 ORTHO05D005422 1.0e-273 946.4 601 77.2
QL10p037473 Quercus lobata HOM05D004337 ORTHO05D005422 1.8e-273 945.7 596 79.4
Dinv09624 Davidia involucrata HOM05D004337 ORTHO05D005422 6.7e-273 943.7 594 77.8
MD15G1140200 Malus domestica HOM05D004337 ORTHO05D005422 8.7e-273 943.3 604 77.3
Prupe.4G286100 Prunus persica HOM05D004337 ORTHO05D005422 8.7e-273 943.3 601 78.0
Potri.004G134500 Populus trichocarpa HOM05D004337 ORTHO05D005422 1.3e-271 939.5 575 80.2
Potri.T045800 Populus trichocarpa HOM05D004337 ORTHO05D005422 1.6e-271 939.1 575 80.0
Potri.018G137500 Populus trichocarpa HOM05D004337 ORTHO05D005422 4.8e-271 937.6 575 79.8
Sabra04G0083600 Salix brachista HOM05D004337 ORTHO05D005422 1.4e-270 936.0 603 76.6
Manes.12G081000 Manihot esculenta HOM05D004337 ORTHO05D005422 2.6e-269 931.8 574 78.9
Thecc.01G146600 Theobroma cacao HOM05D004337 ORTHO05D005422 7.7e-269 930.2 574 78.6
Gohir.A12G002300 Gossypium hirsutum HOM05D004337 ORTHO05D005422 6.5e-268 927.2 573 79.1
PGR119G0424 Punica granatum HOM05D004337 ORTHO05D005422 8.5e-268 926.8 576 78.5
GSVIVG01000243001 Vitis vinifera HOM05D004337 ORTHO05D005422 3.2e-267 924.9 602 76.9
CANSAT54G2432 Cannabis sativa HOM05D004337 ORTHO05D005422 4.2e-267 924.5 577 78.2
MELO3C003282.2 Cucumis melo HOM05D004337 ORTHO05D005422 4.2e-267 924.5 578 77.3
TAR376G0777 Trochodendron aralioides HOM05D004337 ORTHO05D005422 1.2e-266 922.9 598 75.6
MBI06_g32147_MAGBIO Magnolia biondii HOM05D004337 ORTHO05D005422 1.6e-266 922.5 581 76.8
Gorai.008G001400 Gossypium raimondii HOM05D004337 ORTHO05D005422 1.0e-265 919.8 580 78.1
Aqoxy5G01850 Aquilegia oxysepala HOM05D004337 ORTHO05D005422 3.0e-265 918.3 605 77.2
Hma1.2p1_0296F.1_g116900 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 3.9e-265 917.9 592 77.0
CsaV3_4G030000 Cucumis sativus L. HOM05D004337 ORTHO05D005422 5.1e-265 917.5 574 77.5
THA.LOC104818397 Tarenaya hassleriana HOM05D004337 ORTHO05D005422 8.8e-265 916.8 573 79.1
BraA10t44874Z Brassica rapa HOM05D004337 ORTHO05D005422 2.5e-264 915.2 605 75.0
Eucgr.I00018 Eucalyptus grandis HOM05D004337 ORTHO05D005422 4.3e-264 914.4 573 77.7
COL.COLO4_33529 Corchorus olitorius HOM05D004337 ORTHO05D005422 7.4e-264 913.7 591 75.5
Actinidia36582 Actinidia chinensis HOM05D004337 ORTHO05D005422 3.7e-263 911.4 601 75.9
Thhalv10013045m.g Eutrema salsugineum HOM05D004337 ORTHO05D005422 3.7e-263 911.4 603 75.3
Atru.chr3.1466 Acer truncatum HOM05D004337 ORTHO05D005422 4.8e-263 911.0 583 76.5
Oeu046358.1 Olea europaea HOM05D004337 ORTHO05D005422 8.2e-263 910.2 595 75.6
C09p68510 Brassica napus HOM05D004337 ORTHO05D005422 1.1e-262 909.8 604 74.7
BolC9t59595H Brassica oleracea HOM05D004337 ORTHO05D005422 4.1e-262 907.9 608 75.3
Sed0025757 Sechium edule HOM05D004337 ORTHO05D005422 9.1e-262 906.7 574 76.7
MSTRG.23236 Avicennia marina HOM05D004337 ORTHO05D005422 1.2e-261 906.4 577 76.6
Sc16g0009860 Simmondsia chinensis HOM05D004337 ORTHO05D005422 3.4e-261 904.8 574 76.8
Ciclev10025224m.g Citrus clementina HOM05D004337 ORTHO05D005422 4.5e-261 904.4 576 76.6
Peaxi162Scf00353g00735 Petunia axillaris HOM05D004337 ORTHO05D005422 4.5e-261 904.4 606 74.1
HPP92_009218 Vanilla planifolia HOM05D004337 ORTHO05D005422 4.5e-261 904.4 595 74.3
Oeu054207.1 Olea europaea HOM05D004337 ORTHO05D005422 7.7e-261 903.7 592 75.8
Zm00001eb082160 Zea mays HOM05D004337 ORTHO05D005422 7.7e-261 903.7 607 73.0
Actinidia19947 Actinidia chinensis HOM05D004337 ORTHO05D005422 6.5e-260 900.6 573 78.0
Migut.H02542 Erythranthe guttata HOM05D004337 ORTHO05D005422 6.5e-260 900.6 604 75.3
Nitab4.5_0000496g0240 Nicotiana tabacum HOM05D004337 ORTHO05D005422 1.1e-259 899.8 585 75.4
Carub.0006s0742 Capsella rubella HOM05D004337 ORTHO05D005422 1.4e-259 899.4 603 75.3
AL6G19170 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 1.9e-259 899.0 604 74.2
THA.LOC104819366 Tarenaya hassleriana HOM05D004337 ORTHO05D005422 1.9e-259 899.0 573 76.1
AUR62006971 Chenopodium quinoa HOM05D004337 ORTHO05D005422 3.2e-259 898.3 587 74.8
Hund21761 Selenicereus undatus HOM05D004337 ORTHO05D005422 3.2e-259 898.3 576 75.3
CARHR204490 Cardamine hirsuta HOM05D004337 ORTHO05D005422 5.5e-259 897.5 604 73.8
EL10Ac4g09743 Beta vulgaris HOM05D004337 ORTHO05D005422 7.2e-259 897.1 600 73.5
A10p28250 Brassica napus HOM05D004337 ORTHO05D005422 1.6e-258 896.0 604 73.8
TWI75G1462 Tripterygium wilfordii HOM05D004337 ORTHO05D005422 3.6e-258 894.8 575 75.5
FAN23G1824 Fragaria x ananassa HOM05D004337 ORTHO05D005422 6.1e-258 894.0 624 72.8
RcHm_v2.0_Chr3g0484771 Rosa chinensis HOM05D004337 ORTHO05D005422 6.1e-258 894.0 605 74.0
AUR62000615 Chenopodium quinoa HOM05D004337 ORTHO05D005422 1.0e-257 893.3 587 74.3
FAN28G1720 Fragaria x ananassa HOM05D004337 ORTHO05D005422 1.0e-257 893.3 624 72.6
Zm00001eb422980 Zea mays HOM05D004337 ORTHO05D005422 2.3e-257 892.1 605 72.6
CAN.G1156.26 Capsicum annuum HOM05D004337 ORTHO05D005422 5.1e-257 891.0 574 74.9
Solyc05g056350.3 Solanum lycopersicum HOM05D004337 ORTHO05D005422 6.7e-257 890.6 605 72.6
Sopen05g034740 Solanum pennellii HOM05D004337 ORTHO05D005422 6.7e-257 890.6 602 72.6
FvH4_1g25770 Fragaria vesca HOM05D004337 ORTHO05D005422 8.8e-257 890.2 605 74.0
unitig_736.g22365 Utricularia gibba HOM05D004337 ORTHO05D005422 3.3e-256 888.3 590 74.1
FAN26G1467 Fragaria x ananassa HOM05D004337 ORTHO05D005422 4.4e-256 887.9 624 72.3
Nitab4.5_0004764g0030 Nicotiana tabacum HOM05D004337 ORTHO05D005422 5.7e-256 887.5 585 75.2
FAN19G0301 Fragaria x ananassa HOM05D004337 ORTHO05D005422 7.4e-256 887.1 622 72.7
Thhalv10003872m.g Eutrema salsugineum HOM05D004337 ORTHO05D005422 9.7e-256 886.7 605 72.6
PSO761G0180 Papaver somniferum HOM05D004337 ORTHO05D005422 1.3e-255 886.3 602 73.1
Oeu017633.3 Olea europaea HOM05D004337 ORTHO05D005422 1.7e-255 885.9 571 76.2
BcaB08g37252 Brassica carinata HOM05D004337 ORTHO05D005422 2.8e-255 885.2 607 73.5
Lsat_1_v5_gn_2_40441 Lactuca sativa HOM05D004337 ORTHO05D005422 8.2e-255 883.6 591 74.6
PGSC0003DMG400023451 Solanum tuberosum HOM05D004337 ORTHO05D005422 8.2e-255 883.6 606 71.9
PSO210G2848 Papaver somniferum HOM05D004337 ORTHO05D005422 1.1e-254 883.2 605 72.6
Rhsim10G0124700 Rhododendron simsii HOM05D004337 ORTHO05D005422 1.4e-254 882.9 703 65.4
Aa31LG11G2980 Aethionema arabicum HOM05D004337 ORTHO05D005422 2.4e-254 882.1 602 72.8
Os04g0441900 Oryza sativa ssp. japonica HOM05D004337 ORTHO05D005422 2.4e-254 882.1 590 73.7
Aa31LG3G18040 Aethionema arabicum HOM05D004337 ORTHO05D005422 2.0e-253 879.0 597 74.5
Nn5g27210 Nelumbo nucifera HOM05D004337 ORTHO05D005422 2.6e-253 878.6 548 79.6
BcaB04g19858 Brassica carinata HOM05D004337 ORTHO05D005422 1.3e-252 876.3 601 72.4
ECA238G0122 Erigeron canadensis HOM05D004337 ORTHO05D005422 2.9e-252 875.2 605 73.2
CARHR189960 Cardamine hirsuta HOM05D004337 ORTHO05D005422 6.5e-252 874.0 604 72.5
ATR1089G072 Amborella trichopoda HOM05D004337 ORTHO05D005422 1.9e-251 872.5 599 73.3
BraA06t26382Z Brassica rapa HOM05D004337 ORTHO05D005422 1.9e-251 872.5 577 73.7
A06p34530 Brassica napus HOM05D004337 ORTHO05D005422 2.5e-251 872.1 577 73.7
SGA_v2.0_scaffold12G06278 Striga asiatica HOM05D004337 ORTHO05D005422 2.5e-251 872.1 591 73.1
AL6G34865 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 4.2e-251 871.3 603 71.6
BraA09t36334Z Brassica rapa HOM05D004337 ORTHO05D005422 5.5e-251 870.9 599 72.3
AT5G23575 Arabidopsis thaliana HOM05D004337 ORTHO05D005422 7.2e-251 870.5 603 71.6
C07p43970 Brassica napus HOM05D004337 ORTHO05D005422 1.2e-250 869.8 574 73.7
A09p06870 Brassica napus HOM05D004337 ORTHO05D005422 1.6e-250 869.4 605 71.9
BolC9t53677H Brassica oleracea HOM05D004337 ORTHO05D005422 1.6e-250 869.4 575 73.7
BcaC04g23504 Brassica carinata HOM05D004337 ORTHO05D005422 2.1e-250 869.0 575 73.7
Sp2g23620 Schrenkiella parvula HOM05D004337 ORTHO05D005422 2.1e-250 869.0 578 73.4
Carub.0006s2135 Capsella rubella HOM05D004337 ORTHO05D005422 5.2e-249 864.4 605 71.4
C09p07600 Brassica napus HOM05D004337 ORTHO05D005422 6.7e-249 864.0 607 70.8
BolC7t44925H Brassica oleracea HOM05D004337 ORTHO05D005422 8.8e-249 863.6 605 71.6
HanXRQChr10g0285831 Helianthus annuus HOM05D004337 ORTHO05D005422 9.7e-248 860.1 548 76.8
Lj4A821G42 Lonicera japonica HOM05D004337 ORTHO05D005422 2.2e-247 859.0 580 74.1
Dinv10851 Davidia involucrata HOM05D004337 ORTHO05D005422 9.4e-243 843.6 530 78.3
SGA_v2.0_scaffold51G18842 Striga asiatica HOM05D004337 ORTHO05D005422 1.6e-242 842.8 602 72.3
AT5G08500 Arabidopsis thaliana HOM05D004337 ORTHO05D005422 1.8e-238 829.3 527 77.2
DCAR_009619 Daucus carota HOM05D004337 ORTHO05D005422 1.8e-238 829.3 640 68.3
Sp6g34400 Schrenkiella parvula HOM05D004337 ORTHO05D005422 5.4e-238 827.8 608 69.6
Peaxi162Scf00651g00114 Petunia axillaris HOM05D004337 ORTHO05D005422 2.1e-234 815.8 601 69.2
Mapoly0020s0073 Marchantia polymorpha HOM05D004337 ORTHO05D005422 1.2e-232 810.1 569 67.8
CSS0021638 Camellia sinensis var. sinensis HOM05D004337 ORTHO05D005422 2.6e-232 808.9 499 80.6
SMO116G0204 Selaginella moellendorffii HOM05D004337 ORTHO05D005422 9.8e-232 807.0 549 69.8
vmacro12739 Vaccinium macrocarpon HOM05D004337 ORTHO05D005422 8.0e-226 787.3 933 49.2
AL6G18970 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 4.4e-224 781.6 898 50.0
Pp3c5_10010 Physcomitrium patens HOM05D004337 ORTHO05D005422 9.5e-211 737.3 590 63.4
Duzib264G1201 Durio zibethinus HOM05D004337 ORTHO05D005422 8.6e-204 714.1 592 63.0
Ah.06g188230 Amaranthus hybridus HOM05D004337 ORTHO05D005422 1.1e-203 713.8 536 68.7
Gohir.D12G002000 Gossypium hirsutum HOM05D004337 ORTHO05D005422 4.3e-203 711.8 573 63.9
CBR_g44530 Chara braunii HOM05D004337 ORTHO05D005422 7.8e-197 691.0 559 59.7
Cc00_g00820 Coffea canephora HOM05D004337 ORTHO05D005422 5.1e-196 688.3 394 84.5
CDE05G2996 Ceratophyllum demersum HOM05D004337 ORTHO05D005422 2.6e-184 649.4 451 68.5
Haze_19353 Corylus avellana HOM05D004337 ORTHO05D005422 2.5e-171 606.3 345 87.0
AL6G18990 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 6.5e-167 591.7 440 70.0
SHI38349 Sapria himalayana HOM05D004337 ORTHO05D005422 6.1e-157 558.5 425 68.9
Cre09.g397900 Chlamydomonas reinhardtii HOM05D004337 ORTHO05D005422 3.8e-151 539.3 583 48.7
ClCG04G002690 Citrullus lanatus HOM05D004337 ORTHO05D005422 7.9e-141 505.0 312 81.1
AL6G19200 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 3.8e-135 486.1 451 61.6
MCO10G243 Micromonas commoda HOM05D004337 ORTHO05D005422 4.2e-118 429.5 357 58.0
Haze_27034 Corylus avellana HOM05D004337 ORTHO05D005422 3.0e-103 380.2 382 48.2
PRCOL_00006172 Prasinoderma coloniale HOM05D004337 ORTHO05D005422 7.3e-102 375.6 469 43.5
Cfa024513 Carpinus fangiana HOM05D004337 ORTHO05D005422 3.4e-99 366.7 548 38.5
Cpa.g.sc3593.1 Carica papaya HOM05D004337 ORTHO05D005422 2.8e-85 320.5 188 84.0
Cpa.g.sc138.38 Carica papaya HOM05D004337 ORTHO05D005422 8.4e-82 308.9 251 60.2
Haze_19352 Corylus avellana HOM05D004337 ORTHO05D005422 1.6e-80 304.7 229 65.1
MCO07G426 Micromonas commoda HOM05D004337 ORTHO05D005422 1.8e-76 291.2 376 41.5
AL6G19020 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 7.6e-75 285.8 223 65.0
SalBow8G1257 Salvia bowleyana HOM05D004337 ORTHO05D005422 1.1e-68 265.4 217 65.4
SalBow8G3722 Salvia bowleyana HOM05D004337 ORTHO05D005422 1.1e-68 265.4 217 65.4
PRCOL_00005640 Prasinoderma coloniale HOM05D004337 ORTHO05D005422 1.7e-66 258.1 367 36.8
Cc00_g00810 Coffea canephora HOM05D004337 ORTHO05D005422 2.9e-66 257.3 164 73.8
ClCG04G002680 Citrullus lanatus HOM05D004337 ORTHO05D005422 1.0e-63 248.8 166 67.5
HPP92_009290 Vanilla planifolia HOM05D004337 ORTHO05D005422 5.8e-51 206.5 228 50.4
CDE05G3583 Ceratophyllum demersum HOM05D004337 ORTHO05D005422 1.5e-43 181.8 114 81.6
Psat3g077400 Pisum sativum HOM05D004337 ORTHO05D005422 2.3e-39 167.9 229 48.9
Hma1.2p1_0641F.1_g194250 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 2.2e-29 134.8 72 90.3
BcaC04g21668 Brassica carinata HOM05D004337 ORTHO05D021976 1.2e-24 119.0 155 47.7
C09p29160 Brassica napus HOM05D004337 ORTHO05D021976 1.2e-24 119.0 155 47.7
Hma1.2p1_0641F.1_g194230 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 1.2e-16 92.4 106 51.9
SEGI_12766 Sequoiadendron giganteum HOM05D004337 ORTHO05D005422 1.4e-15 89.0 42 92.9
AUR62044487 Chenopodium quinoa HOM05D004337 ORTHO05D021976 4.8e-13 80.5 49 69.4
AUR62044516 Chenopodium quinoa HOM05D004337 ORTHO05D021976 4.8e-13 80.5 49 69.4
CDE05G0837 Ceratophyllum demersum HOM05D004337 ORTHO05D043897 1.6e-11 75.5 71 53.5
SHI11402 Sapria himalayana HOM05D000039 ORTHO05D006865 2.0e-11 75.1 48 68.8
AUR62038356 Chenopodium quinoa HOM05D001477 ORTHO05D021976 7.7e-11 73.2 43 72.1
Pp3c6_20370 Physcomitrium patens HOM05D004337 ORTHO05D043897 8.8e-07 59.7 53 54.7


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