Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G154200 Phaseolus vulgaris HOM05D006319 ORTHO05D007963 8.9e-131 470.3 244 100.0
VMungo0464G0362 Vigna mungo HOM05D006319 ORTHO05D007963 4.3e-117 424.9 250 90.0
Glyma.06G156100 Glycine max HOM05D006319 ORTHO05D007963 2.0e-106 389.4 252 83.3
Glyma.04G209900 Glycine max HOM05D006319 ORTHO05D007963 7.9e-103 377.5 248 81.9
Medtr3g096750 Medicago truncatula HOM05D006319 ORTHO05D007963 5.3e-83 311.6 246 69.1
Psat5g060360 Pisum sativum HOM05D006319 ORTHO05D007963 1.5e-82 310.1 248 69.4
Lj1g0009956 Lotus japonicus HOM05D006319 ORTHO05D007963 2.6e-82 309.3 236 72.9
Lalb_Chr08g0238171 Lupinus albus HOM05D006319 ORTHO05D007963 1.9e-80 303.1 230 71.7
arahy.Tifrunner.gnm1.ann1.P5PFFU Arachis hypogaea HOM05D006319 ORTHO05D007963 2.7e-79 299.3 251 68.1
arahy.Tifrunner.gnm1.ann1.7TU5G5 Arachis hypogaea HOM05D006319 ORTHO05D007963 4.6e-79 298.5 251 67.7
arahy.Tifrunner.gnm1.ann1.B4AV5R Arachis hypogaea HOM05D006319 ORTHO05D007963 7.9e-79 297.7 251 67.3
arahy.Tifrunner.gnm1.ann1.4SM61H Arachis hypogaea HOM05D006319 ORTHO05D007963 1.5e-77 293.5 251 66.5
RcHm_v2.0_Chr2g0122611 Rosa chinensis HOM05D006319 ORTHO05D007963 1.0e-73 280.8 244 63.1
Eucgr.H05122 Eucalyptus grandis HOM05D006319 ORTHO05D007963 1.7e-73 280.0 244 63.5
MELO3C023216.2 Cucumis melo HOM05D006319 ORTHO05D007963 2.2e-73 279.6 211 68.7
Potri.007G100800 Populus trichocarpa HOM05D006319 ORTHO05D007963 8.5e-73 277.7 252 60.7
ClCG02G000280 Citrullus lanatus HOM05D005757 ORTHO05D007090 1.9e-72 276.6 212 66.5
CSS0021790 Camellia sinensis var. sinensis HOM05D006319 ORTHO05D007963 4.2e-72 275.4 221 65.6
QL10p041175 Quercus lobata HOM05D006319 ORTHO05D007963 1.6e-71 273.5 261 60.5
CsaV3_2G019570 Cucumis sativus L. HOM05D006319 ORTHO05D007963 3.6e-71 272.3 188 71.8
Hma1.2p1_0236F.1_g099250 Hydrangea macrophylla HOM05D006319 ORTHO05D007963 1.4e-70 270.4 242 62.0
CiPaw.04G079200 Carya illinoinensis HOM05D006319 ORTHO05D007963 3.9e-70 268.9 211 66.4
Prupe.4G276300 Prunus persica HOM05D006319 ORTHO05D007963 5.1e-70 268.5 248 60.1
Gorai.011G118400 Gossypium raimondii HOM05D006319 ORTHO05D007963 8.8e-70 267.7 247 60.7
Thecc.01G138200 Theobroma cacao HOM05D006319 ORTHO05D007963 1.1e-69 267.3 190 72.1
Duzib187G0662 Durio zibethinus HOM05D006319 ORTHO05D007963 2.6e-69 266.2 212 67.9
Dinv05221 Davidia involucrata HOM05D006319 ORTHO05D007963 4.4e-69 265.4 189 71.4
COL.COLO4_35821 Corchorus olitorius HOM05D006319 ORTHO05D007963 7.4e-69 264.6 178 75.3
Manes.12G159300 Manihot esculenta HOM05D006319 ORTHO05D007963 1.3e-68 263.8 245 61.2
QL10p041464 Quercus lobata HOM05D006319 ORTHO05D007963 1.3e-68 263.8 163 79.8
Ciclev10002322m.g Citrus clementina HOM05D006319 ORTHO05D007963 2.2e-68 263.1 189 72.5
TWI31G0926 Tripterygium wilfordii HOM05D006319 ORTHO05D007963 3.7e-68 262.3 239 62.8
FvH4_1g24980 Fragaria vesca HOM05D006319 ORTHO05D007963 6.3e-68 261.5 247 58.7
Actinidia16521 Actinidia chinensis HOM05D006319 ORTHO05D007963 8.2e-68 261.2 203 67.5
FAN23G2801 Fragaria x ananassa HOM05D006319 ORTHO05D007963 8.2e-68 261.2 247 58.3
Nitab4.5_0004105g0090 Nicotiana tabacum HOM05D006319 ORTHO05D007963 8.2e-68 261.2 213 63.4
GSVIVG01022331001 Vitis vinifera HOM05D006319 ORTHO05D007963 1.1e-67 260.8 190 72.1
Atru.chr4.1000 Acer truncatum HOM05D006319 ORTHO05D007963 2.4e-67 259.6 196 67.9
CANSAT01G1475 Cannabis sativa HOM05D006319 ORTHO05D007963 2.4e-67 259.6 213 64.8
vmacro18688 Vaccinium macrocarpon HOM05D006319 ORTHO05D007963 2.4e-67 259.6 189 67.7
MD01G1000300 Malus domestica HOM05D006319 ORTHO05D007963 3.1e-67 259.2 196 68.4
Lj7A582T32 Lonicera japonica HOM05D006319 ORTHO05D007963 2.6e-66 256.1 163 77.9
PGR102G0633 Punica granatum HOM05D006319 ORTHO05D007963 3.4e-66 255.8 189 70.9
Aqoxy6G00315 Aquilegia oxysepala HOM05D006319 ORTHO05D007963 5.9e-66 255.0 200 67.0
PGSC0003DMG400032538 Solanum tuberosum HOM05D006319 ORTHO05D007963 1.3e-65 253.8 200 65.0
Nn1g08971 Nelumbo nucifera HOM05D006319 ORTHO05D007963 1.7e-65 253.4 189 68.8
Sopen04g004550 Solanum pennellii HOM05D006319 ORTHO05D007963 2.2e-65 253.1 216 61.6
Cpa.g.sc37.12 Carica papaya HOM05D006319 ORTHO05D007963 3.8e-65 252.3 272 55.5
FAN19G2853 Fragaria x ananassa HOM05D006319 ORTHO05D007963 3.8e-65 252.3 264 55.3
Solyc04g009420.3 Solanum lycopersicum HOM05D006319 ORTHO05D007963 3.8e-65 252.3 217 60.4
Nitab4.5_0013462g0010 Nicotiana tabacum HOM05D006319 ORTHO05D007963 6.5e-65 251.5 199 64.8
Thhalv10017176m.g Eutrema salsugineum HOM05D006319 ORTHO05D007963 8.5e-65 251.1 189 68.3
BcaB01g03112 Brassica carinata HOM05D006319 ORTHO05D007963 1.1e-64 250.8 189 66.7
CAN.G186.2 Capsicum annuum HOM05D006319 ORTHO05D007963 1.4e-64 250.4 208 60.1
FAN28G2219 Fragaria x ananassa HOM05D006319 ORTHO05D007963 1.4e-64 250.4 261 54.8
Carub.0004s0957 Capsella rubella HOM05D006319 ORTHO05D007963 4.2e-64 248.8 192 67.2
AL4G23100 Arabidopsis lyrata HOM05D006319 ORTHO05D007963 5.5e-64 248.4 224 61.2
Sp4g11430 Schrenkiella parvula HOM05D006319 ORTHO05D007963 5.5e-64 248.4 190 65.3
A03p26290 Brassica napus HOM05D006319 ORTHO05D007963 1.2e-63 247.3 208 61.5
BcaC01g04984 Brassica carinata HOM05D006319 ORTHO05D007963 1.6e-63 246.9 208 61.5
arahy.Tifrunner.gnm1.ann1.E0QW5U Arachis hypogaea HOM05D006319 ORTHO05D007963 2.1e-63 246.5 251 59.4
BraA04t17731Z Brassica rapa HOM05D006319 ORTHO05D007963 2.1e-63 246.5 210 60.0
Cc02_g33910 Coffea canephora HOM05D006319 ORTHO05D007963 2.1e-63 246.5 247 57.5
AUR62000524 Chenopodium quinoa HOM05D006319 ORTHO05D007963 8.0e-63 244.6 221 62.0
TAR628G0979 Trochodendron aralioides HOM05D006319 ORTHO05D007963 8.0e-63 244.6 224 58.9
BraA03t11843Z Brassica rapa HOM05D006319 ORTHO05D007963 1.4e-62 243.8 208 61.1
Aa31LG5G7620 Aethionema arabicum HOM05D005759 ORTHO05D007172 1.8e-62 243.4 186 66.7
Hund07232 Selenicereus undatus HOM05D006319 ORTHO05D007963 1.8e-62 243.4 196 62.8
BcaC02g08157 Brassica carinata HOM05D006319 ORTHO05D007963 2.3e-62 243.0 209 60.3
C04p57790 Brassica napus HOM05D006319 ORTHO05D007963 2.3e-62 243.0 209 60.3
Migut.H00824 Erythranthe guttata HOM05D006319 ORTHO05D007963 2.3e-62 243.0 188 63.3
Sc02g0003550 Simmondsia chinensis HOM05D006319 ORTHO05D007963 2.3e-62 243.0 211 59.7
BolC4t27297H Brassica oleracea HOM05D006319 ORTHO05D007963 3.0e-62 242.7 209 59.8
C03p31420 Brassica napus HOM05D006319 ORTHO05D007963 5.2e-62 241.9 186 66.1
A04p21670 Brassica napus HOM05D006319 ORTHO05D007963 6.7e-62 241.5 209 59.8
DCAR_009594 Daucus carota HOM05D006319 ORTHO05D007963 6.7e-62 241.5 157 75.8
MSTRG.23490 Avicennia marina HOM05D006319 ORTHO05D007963 1.5e-61 240.4 208 60.6
Oeu011026.1 Olea europaea HOM05D006319 ORTHO05D007963 2.0e-61 240.0 193 65.3
THA.LOC104826346 Tarenaya hassleriana HOM05D006319 ORTHO05D007963 2.6e-61 239.6 198 61.6
CARHR121630 Cardamine hirsuta HOM05D006319 ORTHO05D007963 3.3e-61 239.2 210 59.5
AT2G28605 Arabidopsis thaliana HOM05D006319 ORTHO05D007963 4.4e-61 238.8 189 67.2
BcaB06g28232 Brassica carinata HOM05D006319 ORTHO05D007963 5.7e-61 238.4 210 59.5
AUR62006869 Chenopodium quinoa HOM05D006319 ORTHO05D007963 7.4e-61 238.0 198 65.2
EL10Ac4g09632 Beta vulgaris HOM05D006319 ORTHO05D007963 2.4e-59 233.0 219 58.9
PSO782G1065 Papaver somniferum HOM05D006319 ORTHO05D007963 2.4e-59 233.0 163 71.2
BolC3t15489H Brassica oleracea HOM05D006319 ORTHO05D007963 9.1e-59 231.1 161 69.6
Zm00001eb422700 Zea mays HOM05D006319 ORTHO05D007963 2.0e-58 229.9 160 69.4
CDE08G0565 Ceratophyllum demersum HOM05D006319 ORTHO05D007963 2.6e-58 229.6 197 62.4
SalBow1G4836 Salvia bowleyana HOM05D006319 ORTHO05D007963 2.6e-58 229.6 157 70.7
SGA_v2.0_scaffold273G46467 Striga asiatica HOM05D006319 ORTHO05D007963 3.5e-58 229.2 241 53.5
Ah.06g191080 Amaranthus hybridus HOM05D006319 ORTHO05D007963 5.9e-58 228.4 221 57.0
Eucgr.H02106 Eucalyptus grandis HOM05D006319 ORTHO05D007963 5.9e-58 228.4 244 57.4
MBI06_g35206_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 1.0e-57 227.6 223 56.5
unitig_899.g15151 Utricularia gibba HOM05D006319 ORTHO05D007963 1.0e-57 227.6 192 60.4
HPP92_009279 Vanilla planifolia HOM05D006319 ORTHO05D007963 3.8e-57 225.7 178 66.3
arahy.Tifrunner.gnm1.ann1.GQG991 Arachis hypogaea HOM05D006319 ORTHO05D007963 2.1e-55 219.9 166 70.5
ECA246G1987 Erigeron canadensis HOM05D000001 ORTHO05D000003 2.1e-55 219.9 157 67.5
HanXRQChr12g0378071 Helianthus annuus HOM05D006319 ORTHO05D007963 1.4e-54 217.2 208 54.8
Peaxi162Scf00842g00214 Petunia axillaris HOM05D006319 ORTHO05D007963 2.3e-54 216.5 136 76.5
ATR0584G200 Amborella trichopoda HOM05D006319 ORTHO05D007963 6.7e-54 214.9 158 67.1
SEGI_06099 Sequoiadendron giganteum HOM05D006319 ORTHO05D007963 2.5e-48 196.4 161 61.5
SEGI_37383 Sequoiadendron giganteum HOM05D006319 ORTHO05D007963 3.2e-48 196.1 157 62.4
Rhsim01G0141500 Rhododendron simsii HOM05D006319 ORTHO05D007963 8.8e-46 188.0 185 54.6
Potri.005G068500 Populus trichocarpa HOM05D006319 ORTHO05D007963 1.3e-44 184.1 251 47.4
TPR.G33590 Trifolium pratense HOM05D001650 ORTHO05D001592 4.5e-42 175.6 161 64.6
Lsat_1_v5_gn_5_34560 Lactuca sativa HOM05D006319 ORTHO05D007963 5.9e-42 175.3 193 54.4
AagrBONN_evm.TU.Sc2ySwM_228.2950 Anthoceros agrestis HOM05D006319 ORTHO05D007963 4.7e-39 165.6 159 49.7
Gohir.D10G108000 Gossypium hirsutum HOM05D006319 ORTHO05D007963 6.8e-38 161.8 247 43.7
Pp3c8_18060 Physcomitrium patens HOM05D006319 ORTHO05D007963 6.8e-38 161.8 158 52.5
Gohir.A10G068160 Gossypium hirsutum HOM05D006319 ORTHO05D007963 5.7e-37 158.7 204 46.6
Ca_16986_v3 Cicer arietinum L. HOM05D001650 ORTHO05D001592 2.8e-36 156.4 93 84.9
arahy.Tifrunner.gnm1.ann1.PNID9I Arachis hypogaea HOM05D006319 ORTHO05D007963 5.9e-34 148.7 149 59.7
arahy.Tifrunner.gnm1.ann1.949H7S Arachis hypogaea HOM05D006319 ORTHO05D007963 2.9e-33 146.4 155 56.8
TPR.G10777 Trifolium pratense HOM05D006319 ORTHO05D007963 2.9e-33 146.4 82 84.1
arahy.Tifrunner.gnm1.ann1.Q7YENP Arachis hypogaea HOM05D006319 ORTHO05D007963 6.6e-33 145.2 165 55.8
SMO117G0258 Selaginella moellendorffii HOM05D006319 ORTHO05D007963 5.6e-32 142.1 158 46.2
CBR_g49982 Chara braunii HOM05D006319 ORTHO05D007963 1.4e-30 137.5 166 43.4
Mapoly0092s0018 Marchantia polymorpha HOM05D006319 ORTHO05D007963 2.3e-30 136.7 160 45.6
FAN23G0464 Fragaria x ananassa HOM05D006319 ORTHO05D007963 1.5e-29 134.0 92 71.7
FAN26G1803 Fragaria x ananassa HOM05D001650 ORTHO05D001592 1.9e-27 127.1 106 62.3
Cre16.g678851 Chlamydomonas reinhardtii HOM05D006319 ORTHO05D007963 1.2e-23 114.4 136 40.4
Manes.12G147800 Manihot esculenta HOM05D006319 ORTHO05D007963 4.7e-23 112.5 106 62.3
AagrBONN_evm.TU.Sc2ySwM_362.516 Anthoceros agrestis HOM05D005157 ORTHO05D006652 2.6e-21 106.7 96 56.2
arahy.Tifrunner.gnm1.ann1.RE08FE Arachis hypogaea HOM05D006319 ORTHO05D007963 4.4e-21 105.9 143 47.6
Os04g0434900 Oryza sativa ssp. japonica HOM05D006319 ORTHO05D007963 1.3e-20 104.4 69 69.6
MCO01G211 Micromonas commoda HOM05D006319 ORTHO05D007963 8.9e-14 81.6 128 35.9
arahy.Tifrunner.gnm1.ann1.I50TU7 Arachis hypogaea HOM05D006319 ORTHO05D007963 2.2e-12 77.0 118 41.5
CDE08G0611 Ceratophyllum demersum HOM05D006319 ORTHO05D007963 1.1e-11 74.7 97 52.6
PRCOL_00004434 Prasinoderma coloniale HOM05D006319 ORTHO05D007963 4.6e-10 69.3 118 37.3
Nn4g25453 Nelumbo nucifera HOM05D006608 ORTHO05D008316 5.1e-09 65.9 191 25.1
arahy.Tifrunner.gnm1.ann1.DSS8KU Arachis hypogaea HOM05D006319 ORTHO05D007963 1.1e-08 64.7 105 44.8
arahy.Tifrunner.gnm1.ann1.7ZK9KC Arachis hypogaea HOM05D006608 ORTHO05D008316 6.2e-07 58.9 148 28.4
MBI17_g01556_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 6.2e-07 58.9 85 42.4
MBI11_g02539_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 8.1e-07 58.5 89 43.8
arahy.Tifrunner.gnm1.ann1.V41D0B Arachis hypogaea HOM05D006608 ORTHO05D008316 4.0e-06 56.2 148 27.7


User provided reference genes

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