Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G152600 Phaseolus vulgaris HOM05D008049 ORTHO05D010198 3.4e-137 491.9 288 100.0
Glyma.04G208100 Glycine max HOM05D008049 ORTHO05D010198 7.6e-113 411.0 292 85.6
Glyma.06G157600 Glycine max HOM05D008049 ORTHO05D010198 6.4e-112 407.9 291 85.6
VMungo1309G0538 Vigna mungo HOM05D008049 ORTHO05D010198 3.1e-106 389.0 293 79.5
Lj1g0009929 Lotus japonicus HOM05D008049 ORTHO05D010198 3.5e-86 322.4 307 69.1
Medtr3g096940 Medicago truncatula HOM05D008049 ORTHO05D010198 1.0e-80 304.3 302 58.3
arahy.Tifrunner.gnm1.ann1.WZNZ1Z Arachis hypogaea HOM05D008049 ORTHO05D010198 7.2e-71 271.6 326 59.2
arahy.Tifrunner.gnm1.ann1.M4SWJY Arachis hypogaea HOM05D008049 ORTHO05D010198 1.2e-70 270.8 324 59.0
MD15G1137300 Malus domestica HOM05D008049 ORTHO05D010198 1.0e-64 251.1 307 58.3
CiPaw.03G116500 Carya illinoinensis HOM05D008049 ORTHO05D010198 5.0e-64 248.8 312 50.3
TAR381G0470 Trochodendron aralioides HOM05D008049 ORTHO05D010198 1.9e-63 246.9 311 59.5
Cpa.g.sc37.30 Carica papaya HOM05D008049 ORTHO05D010198 5.5e-63 245.4 310 54.2
Carub.0006s0774 Capsella rubella HOM05D008049 ORTHO05D010198 1.8e-61 240.4 306 47.7
CARHR204240 Cardamine hirsuta HOM05D008049 ORTHO05D010198 5.2e-61 238.8 303 48.5
TWI31G1063 Tripterygium wilfordii HOM05D008049 ORTHO05D010198 5.2e-61 238.8 320 45.9
Lalb_Chr08g0238031 Lupinus albus HOM05D008049 ORTHO05D010198 8.8e-61 238.0 226 60.2
Prupe.4G279900 Prunus persica HOM05D008049 ORTHO05D010198 8.8e-61 238.0 305 50.8
AL6G19520 Arabidopsis lyrata HOM05D008049 ORTHO05D010198 1.5e-60 237.3 307 47.9
Dinv30334 Davidia involucrata HOM05D008049 ORTHO05D010198 3.3e-60 236.1 322 50.3
RcHm_v2.0_Chr2g0123171 Rosa chinensis HOM05D008049 ORTHO05D010198 2.2e-59 233.4 307 50.8
Ciclev10002216m.g Citrus clementina HOM05D008049 ORTHO05D010198 2.8e-59 233.0 299 48.8
Potri.005G069900 Populus trichocarpa HOM05D008049 ORTHO05D010198 3.7e-59 232.6 308 54.5
QL10p040433 Quercus lobata HOM05D008049 ORTHO05D010198 4.8e-59 232.3 324 50.3
FvH4_1g25250 Fragaria vesca HOM05D008049 ORTHO05D010198 6.3e-59 231.9 298 48.7
Atru.chr4.1095 Acer truncatum HOM05D008049 ORTHO05D010198 8.2e-59 231.5 302 45.7
Atru.chr4.1100 Acer truncatum HOM05D008049 ORTHO05D010198 8.2e-59 231.5 302 45.7
FAN26G0656 Fragaria x ananassa HOM05D008049 ORTHO05D010198 1.1e-58 231.1 298 48.3
FAN26G2415 Fragaria x ananassa HOM05D008049 ORTHO05D010198 1.1e-58 231.1 298 48.3
TWI79G0517 Tripterygium wilfordii HOM05D008049 ORTHO05D010198 1.4e-58 230.7 318 44.7
Thhalv10014201m.g Eutrema salsugineum HOM05D008049 ORTHO05D010198 3.1e-58 229.6 312 51.0
Hma1.2p1_0134F.1_g061550 Hydrangea macrophylla HOM05D008049 ORTHO05D010198 4.1e-58 229.2 313 57.5
Aa31LG3G17800 Aethionema arabicum HOM05D008049 ORTHO05D010198 7.0e-58 228.4 306 45.4
AT5G08770 Arabidopsis thaliana HOM05D008049 ORTHO05D010198 1.2e-57 227.6 306 47.1
THA.LOC104818414 Tarenaya hassleriana HOM05D008049 ORTHO05D010198 1.2e-57 227.6 308 57.1
PGR102G0265 Punica granatum HOM05D008049 ORTHO05D010198 1.0e-56 224.6 310 46.5
FAN19G2909 Fragaria x ananassa HOM05D008049 ORTHO05D010198 1.3e-56 224.2 291 48.1
PSO528G0188 Papaver somniferum HOM05D008049 ORTHO05D010198 2.9e-56 223.0 242 52.9
Sp6g34110 Schrenkiella parvula HOM05D008049 ORTHO05D010198 3.8e-56 222.6 316 46.5
BcaB08g37227 Brassica carinata HOM05D008049 ORTHO05D010198 4.2e-55 219.2 314 47.1
PSO170G0957 Papaver somniferum HOM05D008049 ORTHO05D010198 1.8e-53 213.8 242 50.8
Actinidia16520 Actinidia chinensis HOM05D008049 ORTHO05D010198 2.3e-53 213.4 324 54.6
C09p68210 Brassica napus HOM05D008049 ORTHO05D010198 4.0e-53 212.6 309 45.0
BolC9t59570H Brassica oleracea HOM05D008049 ORTHO05D010198 1.5e-52 210.7 309 44.7
A10p28010 Brassica napus HOM05D008049 ORTHO05D010198 1.7e-51 207.2 308 44.2
BraA10t44851Z Brassica rapa HOM05D008049 ORTHO05D010198 3.7e-51 206.1 308 44.2
DCAR_013179 Daucus carota HOM05D008049 ORTHO05D010198 3.1e-50 203.0 311 43.7
Thecc.01G140900 Theobroma cacao HOM05D008049 ORTHO05D010198 5.3e-50 202.2 240 48.3
Duzib187G0110 Durio zibethinus HOM05D008049 ORTHO05D010198 3.8e-48 196.1 233 48.9
Gorai.012G037400 Gossypium raimondii HOM05D008049 ORTHO05D010198 1.5e-47 194.1 242 47.5
Duzib147G0405 Durio zibethinus HOM05D008049 ORTHO05D010198 1.9e-47 193.7 243 47.7
Sc09g0002140 Simmondsia chinensis HOM05D008049 ORTHO05D010198 4.7e-46 189.1 261 47.1
Nn5g28352 Nelumbo nucifera HOM05D008049 ORTHO05D010198 3.0e-45 186.4 288 49.7
Migut.H00830 Erythranthe guttata HOM05D008049 ORTHO05D010198 1.7e-40 170.6 249 41.4
COL.COLO4_12107 Corchorus olitorius HOM05D008049 ORTHO05D010198 6.1e-38 162.2 163 50.9
Psat5g058560 Pisum sativum HOM05D008049 ORTHO05D010198 3.8e-32 142.9 91 78.0
EL10Ac4g09675 Beta vulgaris HOM05D008049 ORTHO05D010198 3.3e-31 139.8 350 44.3
TPR.G7867 Trifolium pratense HOM05D008049 ORTHO05D010198 2.1e-30 137.1 175 63.4
Gohir.A05G382200 Gossypium hirsutum HOM05D008049 ORTHO05D010198 3.6e-30 136.3 225 38.2
Gohir.D04G033000 Gossypium hirsutum HOM05D008049 ORTHO05D010198 6.1e-30 135.6 225 38.2
unitig_899.g15147 Utricularia gibba HOM05D008049 ORTHO05D010198 1.4e-29 134.4 215 39.5
AUR62006889 Chenopodium quinoa HOM05D008049 ORTHO05D010198 3.2e-26 123.2 171 45.0
MD15G1137000 Malus domestica HOM05D008049 ORTHO05D010198 1.2e-25 121.3 150 48.0
Sabra05G0056900 Salix brachista HOM05D008049 ORTHO05D010198 1.2e-25 121.3 111 55.0
CDE04G3132 Ceratophyllum demersum HOM05D008049 ORTHO05D010198 1.5e-23 114.4 277 32.9
CDE07G0304 Ceratophyllum demersum HOM05D008049 ORTHO05D010198 1.2e-20 104.8 271 31.4
Nitab4.5_0000905g0120 Nicotiana tabacum HOM05D008049 ORTHO05D010198 7.5e-20 102.1 166 41.6
MBI06_g26010_MAGBIO Magnolia biondii HOM05D008049 ORTHO05D010198 6.0e-17 92.4 157 38.2
Ca_16998_v3 Cicer arietinum L. HOM05D008049 ORTHO05D010198 2.3e-16 90.5 63 76.2
Ca_17026_v3 Cicer arietinum L. HOM05D008049 ORTHO05D010198 2.3e-16 90.5 63 76.2
AUR62000540 Chenopodium quinoa HOM05D008049 ORTHO05D010198 5.0e-16 89.4 93 51.6
SGA_v2.0_scaffold20G08957 Striga asiatica HOM05D008049 ORTHO05D010198 2.1e-14 84.0 108 42.6
arahy.Tifrunner.gnm1.ann1.P087XE Arachis hypogaea HOM05D008049 ORTHO05D010198 7.5e-12 75.5 38 89.5


User provided reference genes

Program Settings