Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G146200 Phaseolus vulgaris HOM05D005492 ORTHO05D006911 4.4e-82 307.8 140 100.0
VMungo1309G2191 Vigna mungo HOM05D005492 ORTHO05D006911 8.0e-76 287.0 131 99.2
Glyma.04G089600 Glycine max HOM05D005492 ORTHO05D006911 3.0e-75 285.0 131 97.7
Lj1g0026792 Lotus japonicus HOM05D005492 ORTHO05D006911 3.0e-75 285.0 131 98.5
MD15G1393200 Malus domestica HOM05D005492 ORTHO05D006911 6.8e-75 283.9 131 96.9
Manes.18G054601 Manihot esculenta HOM05D005492 ORTHO05D006911 6.8e-75 283.9 131 97.7
TWI12G1341 Tripterygium wilfordii HOM05D005492 ORTHO05D006911 8.9e-75 283.5 131 97.7
CiPaw.15G151700 Carya illinoinensis HOM05D005492 ORTHO05D006911 1.2e-74 283.1 131 96.9
Glyma.06G091400 Glycine max HOM05D005492 ORTHO05D006911 1.2e-74 283.1 131 96.9
Medtr3g111110 Medicago truncatula HOM05D005492 ORTHO05D006911 1.2e-74 283.1 131 97.7
Ca_15548_v3 Cicer arietinum L. HOM05D005492 ORTHO05D006911 1.5e-74 282.7 131 96.2
Ciclev10002666m.g Citrus clementina HOM05D005492 ORTHO05D006911 1.5e-74 282.7 131 96.9
arahy.Tifrunner.gnm1.ann1.7IN1UY Arachis hypogaea HOM05D005492 ORTHO05D006911 2.6e-74 282.0 131 96.9
arahy.Tifrunner.gnm1.ann1.EMS59G Arachis hypogaea HOM05D005492 ORTHO05D006911 2.6e-74 282.0 131 96.9
MD08G1209200 Malus domestica HOM05D005492 ORTHO05D006911 2.6e-74 282.0 131 96.2
Psat5g017920 Pisum sativum HOM05D005492 ORTHO05D006911 2.6e-74 282.0 131 96.9
QL12p040192 Quercus lobata HOM05D005492 ORTHO05D006911 3.4e-74 281.6 131 96.9
RcHm_v2.0_Chr7g0232851 Rosa chinensis HOM05D005492 ORTHO05D006911 3.4e-74 281.6 131 96.9
Gohir.A05G264075 Gossypium hirsutum HOM05D005492 ORTHO05D006911 4.4e-74 281.2 131 96.2
Gohir.D05G266500 Gossypium hirsutum HOM05D005492 ORTHO05D006911 4.4e-74 281.2 131 96.2
Gorai.009G278400 Gossypium raimondii HOM05D005492 ORTHO05D006911 4.4e-74 281.2 131 96.2
Sabra02G0084500 Salix brachista HOM05D005492 ORTHO05D006911 4.4e-74 281.2 131 96.9
MSTRG.22188 Avicennia marina HOM05D005492 ORTHO05D006911 9.8e-74 280.0 132 94.7
Gohir.D06G028400 Gossypium hirsutum HOM05D005492 ORTHO05D006911 9.8e-74 280.0 131 95.4
Hma1.2p1_1548F.1_g290020 Hydrangea macrophylla HOM05D005492 ORTHO05D006911 9.8e-74 280.0 131 96.2
Potri.002G107600 Populus trichocarpa HOM05D005492 ORTHO05D006911 9.8e-74 280.0 131 96.2
CANSAT35G2015 Cannabis sativa HOM05D005492 ORTHO05D006911 1.7e-73 279.3 131 95.4
Cpa.g.sc160.3 Carica papaya HOM05D005492 ORTHO05D006911 1.7e-73 279.3 131 96.2
CsaV3_3G048290 Cucumis sativus L. HOM05D005492 ORTHO05D006911 1.7e-73 279.3 131 94.7
Thecc.08G078100 Theobroma cacao HOM05D005492 ORTHO05D006911 1.7e-73 279.3 131 94.7
TWI32G1091 Tripterygium wilfordii HOM05D005492 ORTHO05D006911 1.7e-73 279.3 131 95.4
Cfa020694 Carpinus fangiana HOM05D005492 ORTHO05D006911 2.2e-73 278.9 131 96.2
Haze_18999 Corylus avellana HOM05D005492 ORTHO05D006911 2.2e-73 278.9 131 96.2
Eucgr.F00462 Eucalyptus grandis HOM05D005492 ORTHO05D006911 2.2e-73 278.9 131 95.4
Lalb_Chr08g0242711 Lupinus albus HOM05D005492 ORTHO05D006911 2.2e-73 278.9 131 94.7
Prupe.1G541400 Prunus persica HOM05D005492 ORTHO05D006911 2.2e-73 278.9 131 95.4
TPR.G12370 Trifolium pratense HOM05D005492 ORTHO05D006911 2.2e-73 278.9 131 96.2
AL1G40960 Arabidopsis lyrata HOM05D005492 ORTHO05D006911 2.9e-73 278.5 131 93.9
AT1G27530 Arabidopsis thaliana HOM05D005492 ORTHO05D006911 2.9e-73 278.5 131 93.9
Carub.0001s2610 Capsella rubella HOM05D005492 ORTHO05D006911 2.9e-73 278.5 131 93.9
FAN04G2818 Fragaria x ananassa HOM05D005492 ORTHO05D006911 2.9e-73 278.5 131 95.4
Gohir.A06G029400 Gossypium hirsutum HOM05D005492 ORTHO05D006911 2.9e-73 278.5 131 94.7
Sed0023469 Sechium edule HOM05D005492 ORTHO05D006911 2.9e-73 278.5 131 94.7
FAN08G0693 Fragaria x ananassa HOM05D005492 ORTHO05D006911 3.7e-73 278.1 131 95.4
FAN18G0360 Fragaria x ananassa HOM05D005492 ORTHO05D006911 3.7e-73 278.1 131 95.4
COL.COLO4_35339 Corchorus olitorius HOM05D005492 ORTHO05D006911 4.9e-73 277.7 131 94.7
THA.LOC104800327 Tarenaya hassleriana HOM05D005492 ORTHO05D006911 4.9e-73 277.7 131 94.7
Gorai.010G031300 Gossypium raimondii HOM05D005492 ORTHO05D006911 6.4e-73 277.3 131 94.7
PGR083G0175 Punica granatum HOM05D005492 ORTHO05D006911 6.4e-73 277.3 131 93.9
TAR628G0115 Trochodendron aralioides HOM05D005492 ORTHO05D006911 6.4e-73 277.3 131 94.7
Duzib041G0144 Durio zibethinus HOM05D005492 ORTHO05D006911 8.3e-73 276.9 131 94.7
CARHR027130 Cardamine hirsuta HOM05D005492 ORTHO05D006911 1.1e-72 276.6 131 93.1
TAR381G0934 Trochodendron aralioides HOM05D005492 ORTHO05D006911 1.4e-72 276.2 132 92.4
TAR381G1662 Trochodendron aralioides HOM05D005492 ORTHO05D006911 1.4e-72 276.2 132 92.4
vmacro04619 Vaccinium macrocarpon HOM05D005492 ORTHO05D006911 1.4e-72 276.2 131 93.9
Actinidia19266 Actinidia chinensis HOM05D005492 ORTHO05D006911 1.8e-72 275.8 131 94.7
CSS0048416 Camellia sinensis var. sinensis HOM05D005492 ORTHO05D006911 1.8e-72 275.8 131 94.7
Dinv44895 Davidia involucrata HOM05D005492 ORTHO05D006911 1.8e-72 275.8 131 93.9
Dinv22020 Davidia involucrata HOM05D005492 ORTHO05D006911 2.4e-72 275.4 131 93.9
Duzib041G0066 Durio zibethinus HOM05D005492 ORTHO05D006911 3.2e-72 275.0 131 93.9
MSTRG.24417 Avicennia marina HOM05D005492 ORTHO05D006911 5.4e-72 274.2 131 93.1
Duzib116G0911 Durio zibethinus HOM05D005492 ORTHO05D006911 7.0e-72 273.9 131 92.4
MBI16_g26726_MAGBIO Magnolia biondii HOM05D005492 ORTHO05D006911 7.0e-72 273.9 131 93.1
Sp1g23790 Schrenkiella parvula HOM05D005492 ORTHO05D006911 7.0e-72 273.9 131 92.4
C07p17680 Brassica napus HOM05D005492 ORTHO05D006911 9.2e-72 273.5 131 93.1
Actinidia10257 Actinidia chinensis HOM05D005492 ORTHO05D006911 1.2e-71 273.1 131 93.1
Thhalv10008910m.g Eutrema salsugineum HOM05D005492 ORTHO05D006911 1.2e-71 273.1 131 92.4
BolC3t19680H Brassica oleracea HOM05D005492 ORTHO05D006911 1.6e-71 272.7 131 92.4
A07p11710 Brassica napus HOM05D005492 ORTHO05D006911 2.0e-71 272.3 131 92.4
A08p26210 Brassica napus HOM05D005492 ORTHO05D006911 2.0e-71 272.3 131 92.4
BolC7t42275H Brassica oleracea HOM05D005492 ORTHO05D006911 2.0e-71 272.3 131 92.4
BraA07t28956Z Brassica rapa HOM05D005492 ORTHO05D006911 2.0e-71 272.3 131 92.4
BraA08t34572Z Brassica rapa HOM05D005492 ORTHO05D006911 2.0e-71 272.3 131 92.4
PSO210G2227 Papaver somniferum HOM05D005492 ORTHO05D006911 2.0e-71 272.3 131 93.9
PSO761G0095 Papaver somniferum HOM05D005492 ORTHO05D006911 2.0e-71 272.3 131 93.9
BcaB03g13980 Brassica carinata HOM05D005492 ORTHO05D006911 2.7e-71 271.9 131 91.6
BcaC01g06944 Brassica carinata HOM05D005492 ORTHO05D006911 2.7e-71 271.9 131 91.6
CAN.G723.31 Capsicum annuum HOM05D005492 ORTHO05D006911 2.7e-71 271.9 131 92.4
Lsat_1_v5_gn_9_81101 Lactuca sativa HOM05D005492 ORTHO05D006911 2.7e-71 271.9 131 93.1
Hund05232 Selenicereus undatus HOM05D005492 ORTHO05D006911 2.7e-71 271.9 131 93.1
vmacro21373 Vaccinium macrocarpon HOM05D005492 ORTHO05D006911 2.7e-71 271.9 131 92.4
Aqoxy5G01947 Aquilegia oxysepala HOM05D005492 ORTHO05D006911 3.5e-71 271.6 131 93.1
C03p74220 Brassica napus HOM05D005492 ORTHO05D006911 3.5e-71 271.6 131 91.6
DCAR_009548 Daucus carota HOM05D005492 ORTHO05D006911 3.5e-71 271.6 131 93.9
Nitab4.5_0000377g0170 Nicotiana tabacum HOM05D005492 ORTHO05D006911 3.5e-71 271.6 131 92.4
Nitab4.5_0005557g0040 Nicotiana tabacum HOM05D005492 ORTHO05D006911 3.5e-71 271.6 131 92.4
BcaC01g01601 Brassica carinata HOM05D005492 ORTHO05D006911 5.9e-71 270.8 131 91.6
HanXRQChr01g0001771 Helianthus annuus HOM05D005492 ORTHO05D006911 5.9e-71 270.8 131 92.4
Oeu002945.1 Olea europaea HOM05D005492 ORTHO05D006911 7.8e-71 270.4 131 91.6
BcaC05g26754 Brassica carinata HOM05D005492 ORTHO05D006911 1.0e-70 270.0 131 91.6
Cc10_g08150 Coffea canephora HOM05D005492 ORTHO05D006911 1.0e-70 270.0 131 93.1
Oeu026363.1 Olea europaea HOM05D005492 ORTHO05D006911 1.3e-70 269.6 131 91.6
unitig_8.g4867 Utricularia gibba HOM05D002193 ORTHO05D002631 1.3e-70 269.6 131 90.8
BcaC06g35300 Brassica carinata HOM05D005492 ORTHO05D006911 1.7e-70 269.2 131 91.6
Solyc04g076890.4 Solanum lycopersicum HOM05D005492 ORTHO05D006911 1.7e-70 269.2 131 91.6
Sopen04g030660 Solanum pennellii HOM05D005492 ORTHO05D006911 1.7e-70 269.2 131 91.6
PGSC0003DMG400006380 Solanum tuberosum HOM05D005492 ORTHO05D006911 1.7e-70 269.2 131 91.6
SGA_v2.0_scaffold28G11869 Striga asiatica HOM05D005492 ORTHO05D006911 1.7e-70 269.2 131 91.6
GSVIVG01009242001 Vitis vinifera HOM05D005492 ORTHO05D006911 2.3e-70 268.9 131 92.4
Lj4A81T75 Lonicera japonica HOM05D005492 ORTHO05D006911 3.9e-70 268.1 131 92.4
Atru.BG.248.p Acer truncatum HOM05D005492 ORTHO05D006911 5.0e-70 267.7 131 93.1
ECA232G4293 Erigeron canadensis HOM05D005492 ORTHO05D006911 8.6e-70 266.9 131 90.8
CDE04G0412 Ceratophyllum demersum HOM05D005492 ORTHO05D006911 1.1e-69 266.5 131 89.3
Rhsim07G0214900 Rhododendron simsii HOM05D005492 ORTHO05D006911 1.1e-69 266.5 131 92.4
Aa31LG7G10120 Aethionema arabicum HOM05D005492 ORTHO05D006911 1.5e-69 266.2 131 91.6
Migut.N02829 Erythranthe guttata HOM05D005492 ORTHO05D006911 1.5e-69 266.2 131 90.1
Migut.O00437 Erythranthe guttata HOM05D005492 ORTHO05D006911 1.5e-69 266.2 131 90.1
Ah.00g000130 Amaranthus hybridus HOM05D005492 ORTHO05D006911 2.5e-69 265.4 131 90.1
Sc02g0008380 Simmondsia chinensis HOM05D005492 ORTHO05D006911 7.3e-69 263.8 131 89.3
AUR62035408 Chenopodium quinoa HOM05D005492 ORTHO05D006911 1.6e-68 262.7 131 89.3
AUR62035696 Chenopodium quinoa HOM05D005492 ORTHO05D006911 1.6e-68 262.7 131 89.3
HPP92_010753 Vanilla planifolia HOM05D005492 ORTHO05D006911 1.3e-65 253.1 131 85.5
Atru.chr13.934 Acer truncatum HOM05D005492 ORTHO05D006911 3.7e-65 251.5 125 92.0
SEGI_29138 Sequoiadendron giganteum HOM05D005492 ORTHO05D006911 1.4e-64 249.6 131 83.2
ATR0767G107 Amborella trichopoda HOM05D005492 ORTHO05D006911 8.6e-62 240.4 129 82.9
Mapoly0013s0107 Marchantia polymorpha HOM05D005492 ORTHO05D006911 3.3e-61 238.4 131 78.6
Os10g0205200 Oryza sativa ssp. japonica HOM05D005492 ORTHO05D006911 4.3e-61 238.0 131 79.4
Zm00001eb010950 Zea mays HOM05D005492 ORTHO05D006911 1.2e-60 236.5 131 77.9
MELO3C003490.2 Cucumis melo HOM05D005492 ORTHO05D006911 2.1e-60 235.7 124 86.3
CBR_g37394 Chara braunii HOM05D005492 ORTHO05D006911 8.1e-60 233.8 131 77.1
FvH4_5g33720 Fragaria vesca HOM05D005492 ORTHO05D006911 2.3e-59 232.3 112 93.8
Peaxi162Scf00626g00718 Petunia axillaris HOM05D005492 ORTHO05D006911 2.6e-58 228.8 112 92.9
ClCG11G014860 Citrullus lanatus HOM05D005492 ORTHO05D006911 1.3e-57 226.5 106 93.4
Pp3c16_2350 Physcomitrium patens HOM05D005492 ORTHO05D006911 3.7e-57 224.9 131 74.0
PRCOL_00001807 Prasinoderma coloniale HOM05D005492 ORTHO05D006911 4.1e-56 221.5 131 70.2
THA.LOC104807850 Tarenaya hassleriana HOM05D005492 ORTHO05D006911 2.1e-55 219.2 125 80.0
MBI16_g14677_MAGBIO Magnolia biondii HOM05D005492 ORTHO05D006911 4.6e-55 218.0 114 88.6
Cfa015905 Carpinus fangiana HOM05D005492 ORTHO05D000088 3.6e-52 208.4 135 75.6
AagrBONN_evm.TU.Sc2ySwM_369.477 Anthoceros agrestis HOM05D005492 ORTHO05D006911 1.8e-51 206.1 112 78.6
Prupe.7G085600 Prunus persica HOM05D005492 ORTHO05D006911 1.5e-50 203.0 117 79.5
Cre02.g142350 Chlamydomonas reinhardtii HOM05D005492 ORTHO05D006911 3.8e-49 198.4 130 64.6
CSS0004398 Camellia sinensis var. sinensis HOM05D005492 ORTHO05D006911 2.8e-44 182.2 91 91.2
Haze_27628 Corylus avellana HOM05D005492 ORTHO05D006911 2.1e-39 166.0 131 57.3
Duzib093G0511 Durio zibethinus HOM05D005492 ORTHO05D006911 1.1e-35 153.7 75 89.3
Nn2g14030 Nelumbo nucifera HOM05D005492 ORTHO05D006911 1.2e-31 140.2 113 62.8
MD08G1145300 Malus domestica HOM05D005492 ORTHO05D006911 3.6e-28 128.6 63 88.9
MD00G1203800 Malus domestica HOM05D005492 ORTHO05D247194 1.9e-21 106.3 111 50.5
MD16G1251000 Malus domestica HOM05D005492 ORTHO05D245813 3.3e-21 105.5 112 51.8
MD05G1007500 Malus domestica HOM05D005492 ORTHO05D006911 7.6e-18 94.4 85 58.8
Dinv07042 Davidia involucrata HOM05D005492 ORTHO05D185078 1.2e-15 87.0 92 53.3


User provided reference genes

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