Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G144400 Phaseolus vulgaris HOM05D008012 ORTHO05D010154 4.9e-109 397.9 211 100.0
Glyma.04G091500 Glycine max HOM05D008012 ORTHO05D010154 5.6e-81 304.7 210 79.5
Glyma.06G093300 Glycine max HOM05D008012 ORTHO05D010154 4.6e-75 285.0 201 79.1
VMungo1309G2208 Vigna mungo HOM05D008012 ORTHO05D010154 2.8e-48 196.1 109 88.1
Lalb_Chr11g0065041 Lupinus albus HOM05D008012 ORTHO05D010154 4.1e-47 192.2 206 55.3
Lj1g0025426 Lotus japonicus HOM05D008012 ORTHO05D010154 6.5e-45 184.9 195 55.4
Lalb_Chr23g0270051 Lupinus albus HOM05D008012 ORTHO05D010154 3.3e-41 172.6 202 54.0
TPR.G26063 Trifolium pratense HOM05D008012 ORTHO05D010154 4.5e-30 135.6 201 46.8
Atru.chr13.1021 Acer truncatum HOM05D008012 ORTHO05D010154 9.4e-28 127.9 224 38.8
ECA232G0711 Erigeron canadensis HOM05D008012 ORTHO05D010154 1.6e-27 127.1 204 44.1
Ciclev10002397m.g Citrus clementina HOM05D008012 ORTHO05D010154 2.1e-27 126.7 194 44.8
VMungo1309G2756 Vigna mungo HOM05D008012 ORTHO05D010154 3.6e-27 125.9 85 82.4
Aqoxy5G01307 Aquilegia oxysepala HOM05D008012 ORTHO05D010154 4.7e-27 125.6 178 42.7
Psat5g046360 Pisum sativum HOM05D008012 ORTHO05D010154 6.1e-27 125.2 195 47.7
Ca_15998_v3 Cicer arietinum L. HOM05D008012 ORTHO05D010154 7.9e-27 124.8 194 44.8
CiPaw.07G166200 Carya illinoinensis HOM05D008012 ORTHO05D010154 1.4e-26 124.0 296 33.1
QL09p017632 Quercus lobata HOM05D008012 ORTHO05D010154 2.3e-26 123.2 196 42.3
Hund16860 Selenicereus undatus HOM05D008012 ORTHO05D010154 3.9e-26 122.5 187 42.8
Manes.18G059880 Manihot esculenta HOM05D008012 ORTHO05D010154 7.4e-25 118.2 189 41.8
MBI02_g32605_MAGBIO Magnolia biondii HOM05D008012 ORTHO05D010154 3.7e-24 115.9 257 34.2
Medtr3g100460 Medicago truncatula HOM05D008012 ORTHO05D010154 6.3e-24 115.2 203 39.9
GSVIVG01009167001 Vitis vinifera HOM05D008012 ORTHO05D010154 8.2e-24 114.8 129 49.6
RcHm_v2.0_Chr7g0236831 Rosa chinensis HOM05D008012 ORTHO05D010154 1.1e-23 114.4 202 39.6
Gohir.D05G222500 Gossypium hirsutum HOM05D008012 ORTHO05D010154 3.1e-23 112.8 280 34.6
Cpa.g.sc21.9 Carica papaya HOM05D008012 ORTHO05D010154 4.1e-23 112.5 224 38.8
Gorai.009G229900 Gossypium raimondii HOM05D008012 ORTHO05D010154 7.0e-23 111.7 280 34.6
EL10Ac1g01062 Beta vulgaris HOM05D008012 ORTHO05D010154 3.5e-22 109.4 195 35.9
COL.COLO4_35233 Corchorus olitorius HOM05D008012 ORTHO05D010154 3.5e-22 109.4 251 35.5
arahy.Tifrunner.gnm1.ann1.S7389H Arachis hypogaea HOM05D008012 ORTHO05D010154 4.5e-22 109.0 134 47.0
AUR62019041 Chenopodium quinoa HOM05D008012 ORTHO05D010154 5.9e-22 108.6 196 35.2
Gohir.A05G219900 Gossypium hirsutum HOM05D008012 ORTHO05D010154 5.9e-22 108.6 281 33.8
Prupe.1G530900 Prunus persica HOM05D008012 ORTHO05D010154 1.0e-21 107.8 105 51.4
Dinv44854 Davidia involucrata HOM05D008012 ORTHO05D010154 1.7e-21 107.1 272 32.0
Rhsim06G0072100 Rhododendron simsii HOM05D008012 ORTHO05D010154 2.9e-21 106.3 129 46.5
CSS0008352 Camellia sinensis var. sinensis HOM05D008012 ORTHO05D010154 5.0e-21 105.5 177 40.1
Cfa013683 Carpinus fangiana HOM05D008012 ORTHO05D010154 8.5e-21 104.8 197 36.0
Dinv42620 Davidia involucrata HOM05D008012 ORTHO05D010154 1.1e-20 104.4 168 39.9
Lsat_1_v5_gn_9_75360 Lactuca sativa HOM05D008012 ORTHO05D010154 1.1e-20 104.4 193 39.9
TAR628G1418 Trochodendron aralioides HOM05D008012 ORTHO05D010154 9.4e-20 101.3 182 37.9
Duzib093G0747 Durio zibethinus HOM05D008012 ORTHO05D010154 1.6e-19 100.5 318 30.8
vmacro21334 Vaccinium macrocarpon HOM05D008012 ORTHO05D010154 2.1e-19 100.1 202 35.6
CANSAT25G2577 Cannabis sativa HOM05D008012 ORTHO05D010154 3.6e-19 99.4 208 34.1
HanXRQChr12g0378051 Helianthus annuus HOM05D008012 ORTHO05D010154 3.6e-19 99.4 178 39.9
FAN04G0544 Fragaria x ananassa HOM05D008012 ORTHO05D010154 1.8e-18 97.1 194 35.1
Hma1.2p1_0125F.1_g058940 Hydrangea macrophylla HOM05D008012 ORTHO05D010154 1.8e-18 97.1 280 31.8
FvH4_5g35450 Fragaria vesca HOM05D008012 ORTHO05D010154 4.0e-18 95.9 194 35.6
FAN08G2109 Fragaria x ananassa HOM05D008012 ORTHO05D010154 4.0e-18 95.9 194 35.6
FAN18G1410 Fragaria x ananassa HOM05D008012 ORTHO05D010154 5.2e-18 95.5 191 35.1
HanXRQChr12g0378041 Helianthus annuus HOM05D008012 ORTHO05D010154 6.7e-18 95.1 109 46.8
CDE04G1170 Ceratophyllum demersum HOM05D008012 ORTHO05D010154 1.1e-17 94.4 217 34.1
Nn5g29899 Nelumbo nucifera HOM05D008012 ORTHO05D010154 1.1e-17 94.4 270 30.4
PGR031G3518 Punica granatum HOM05D052328 ORTHO05D010154 1.5e-17 94.0 178 38.2
Thecc.08G070000 Theobroma cacao HOM05D008012 ORTHO05D010154 5.7e-17 92.0 198 34.8
TWI56G1079 Tripterygium wilfordii HOM05D008012 ORTHO05D010154 1.3e-16 90.9 148 40.5
Aqoxy6G01439 Aquilegia oxysepala HOM05D008012 ORTHO05D010154 1.2e-14 84.3 136 40.4
Eucgr.F02139 Eucalyptus grandis HOM05D008012 ORTHO05D010154 1.2e-14 84.3 174 32.8
ATR0665G245 Amborella trichopoda HOM05D008012 ORTHO05D010154 2.0e-14 83.6 183 33.3
CAN.G1215.11 Capsicum annuum HOM05D008012 ORTHO05D010154 1.3e-13 80.9 116 40.5
PSO017G0519 Papaver somniferum HOM05D008012 ORTHO05D010154 2.7e-11 73.2 182 32.4
Zm00001eb038310 Zea mays HOM05D008012 ORTHO05D010154 2.7e-11 73.2 108 36.1
Sabra05G0120100 Salix brachista HOM05D008012 ORTHO05D010154 3.0e-10 69.7 97 37.1
Sc23g0000670 Simmondsia chinensis HOM05D008012 ORTHO05D010154 1.5e-09 67.4 134 32.1
Actinidia10381 Actinidia chinensis HOM05D000160 ORTHO05D001344 2.6e-09 66.6 69 50.7
arahy.Tifrunner.gnm1.ann1.XWH5X4 Arachis hypogaea HOM05D008012 ORTHO05D010154 2.6e-09 66.6 159 36.5
Pp3c2_36970 Physcomitrium patens HOM05D008196 ORTHO05D010261 2.6e-09 66.6 205 27.3
Pp3c2_36980 Physcomitrium patens HOM05D008196 ORTHO05D010261 2.6e-09 66.6 205 27.3
Pp3c1_4500 Physcomitrium patens HOM05D008196 ORTHO05D010261 3.7e-08 62.8 205 25.9
CSS0015058 Camellia sinensis var. sinensis HOM05D008012 ORTHO05D010154 1.4e-07 60.8 75 44.0
AagrBONN_evm.TU.Sc2ySwM_344.3461 Anthoceros agrestis HOM05D008196 ORTHO05D010261 1.8e-07 60.5 232 29.3
HPP92_005977 Vanilla planifolia HOM05D061362 ORTHO05D010154 5.4e-07 58.9 89 34.8
Potri.005G156500 Populus trichocarpa HOM05D008012 ORTHO05D010154 7.0e-07 58.5 117 35.0
Mapoly0028s0074 Marchantia polymorpha HOM05D008196 ORTHO05D010261 9.1e-07 58.2 200 27.5
SEGI_09514 Sequoiadendron giganteum HOM05D008012 ORTHO05D010154 2.0e-06 57.0 74 33.8
SMO367G1035 Selaginella moellendorffii HOM05D008196 ORTHO05D010261 3.5e-06 56.2 202 27.7


User provided reference genes

Program Settings