Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G141200 Phaseolus vulgaris HOM05D006503 ORTHO05D008116 6.1e-115 419.1 631 100.0
VMungo1127G1467 Vigna mungo HOM05D006503 ORTHO05D008116 9.5e-76 288.9 629 75.5
VMungo1309G1456 Vigna mungo HOM05D006503 ORTHO05D008116 1.0e-69 268.9 628 72.5
Lalb_Chr13g0292411 Lupinus albus HOM05D006503 ORTHO05D008116 3.1e-34 151.0 637 73.8
arahy.Tifrunner.gnm1.ann1.ER6M1I Arachis hypogaea HOM05D006503 ORTHO05D008116 3.0e-29 134.4 591 77.0
arahy.Tifrunner.gnm1.ann1.YC2S1L Arachis hypogaea HOM05D006503 ORTHO05D008116 5.1e-29 133.7 591 77.0
arahy.Tifrunner.gnm1.ann1.GW2J4P Arachis hypogaea HOM05D006503 ORTHO05D008116 1.1e-28 132.5 591 76.6
Psat5g067680 Pisum sativum HOM05D006503 ORTHO05D008116 1.5e-28 132.1 162 46.9
Glyma.06G144800 Glycine max HOM05D006503 ORTHO05D008116 5.7e-28 130.2 191 85.9
arahy.Tifrunner.gnm1.ann1.97ANKK Arachis hypogaea HOM05D006503 ORTHO05D008116 9.6e-28 129.4 125 52.0
arahy.Tifrunner.gnm1.ann1.RL700P Arachis hypogaea HOM05D006503 ORTHO05D008116 2.1e-27 128.3 125 52.0
TPR.G16108 Trifolium pratense HOM05D006503 ORTHO05D008116 1.4e-26 125.6 165 45.5
TPR.G29649 Trifolium pratense HOM05D006503 ORTHO05D008116 1.4e-26 125.6 161 44.1
Lj6g0025212 Lotus japonicus HOM05D006503 ORTHO05D008116 1.3e-24 119.0 191 76.4
Ca_06133_v3 Cicer arietinum L. HOM05D006503 ORTHO05D008116 1.4e-23 115.5 192 67.7
arahy.Tifrunner.gnm1.ann1.6F2C80 Arachis hypogaea HOM05D006503 ORTHO05D008116 4.2e-23 114.0 110 51.8
CSS0042104 Camellia sinensis var. sinensis HOM05D006503 ORTHO05D008116 9.3e-23 112.8 99 51.5
arahy.Tifrunner.gnm1.ann1.KC4DMY Arachis hypogaea HOM05D006503 ORTHO05D008116 3.5e-22 110.9 191 64.4
Glyma.04G221000 Glycine max HOM05D006503 ORTHO05D008116 6.1e-22 110.2 67 82.1
arahy.Tifrunner.gnm1.ann1.J10LLE Arachis hypogaea HOM05D006503 ORTHO05D008116 1.8e-21 108.6 111 49.5
arahy.Tifrunner.gnm1.ann1.C3XHUQ Arachis hypogaea HOM05D006503 ORTHO05D008116 5.1e-21 107.1 111 53.2
CSS0000010 Camellia sinensis var. sinensis HOM05D006503 ORTHO05D008116 4.3e-20 104.0 94 51.1
Cfa017777 Carpinus fangiana HOM05D006503 ORTHO05D008116 7.4e-20 103.2 191 68.1
QL04p096113 Quercus lobata HOM05D006503 ORTHO05D008116 1.3e-19 102.4 191 64.4
QL04p096294 Quercus lobata HOM05D006503 ORTHO05D008116 1.3e-19 102.4 191 67.5
Medtr5g018230 Medicago truncatula HOM05D006503 ORTHO05D008116 1.6e-19 102.1 109 48.6
Medtr5g039700 Medicago truncatula HOM05D006503 ORTHO05D008116 2.8e-19 101.3 109 47.7
Aa31LG4G1470 Aethionema arabicum HOM05D006503 ORTHO05D008116 3.7e-19 100.9 102 49.0
Dinv36159 Davidia involucrata HOM05D006503 ORTHO05D008116 6.3e-19 100.1 96 49.0
Manes.09G020600 Manihot esculenta HOM05D006503 ORTHO05D008116 6.3e-19 100.1 191 66.0
Rhsim04G0102600 Rhododendron simsii HOM05D006503 ORTHO05D008116 6.3e-19 100.1 128 40.6
AL2G40180 Arabidopsis lyrata HOM05D006503 ORTHO05D008116 1.1e-18 99.4 102 50.0
AT1G79540 Arabidopsis thaliana HOM05D006503 ORTHO05D008116 1.1e-18 99.4 102 49.0
Hma1.2p1_1041F.1_g251090 Hydrangea macrophylla HOM05D006503 ORTHO05D008116 1.1e-18 99.4 136 41.2
Nitab4.5_0000051g0090 Nicotiana tabacum HOM05D006503 ORTHO05D008116 1.1e-18 99.4 136 40.4
Sp5g34600 Schrenkiella parvula HOM05D006503 ORTHO05D008116 1.1e-18 99.4 102 49.0
Lju124C42T22 Lonicera japonica HOM05D006503 ORTHO05D008116 1.4e-18 99.0 116 44.8
Sed0013522 Sechium edule HOM05D006503 ORTHO05D008116 1.8e-18 98.6 128 43.8
Atru.BG.180.p Acer truncatum HOM05D006503 ORTHO05D008116 2.4e-18 98.2 132 40.9
A02p22890 Brassica napus HOM05D006503 ORTHO05D008116 2.4e-18 98.2 101 49.5
BraA02t07289Z Brassica rapa HOM05D006503 ORTHO05D008116 2.4e-18 98.2 101 49.5
DCAR_022897 Daucus carota HOM05D006503 ORTHO05D008116 2.4e-18 98.2 124 43.5
Potri.006G049400 Populus trichocarpa HOM05D006503 ORTHO05D008116 2.4e-18 98.2 191 66.5
Nitab4.5_0002332g0010 Nicotiana tabacum HOM05D006503 ORTHO05D008116 3.1e-18 97.8 132 40.9
Thhalv10018150m.g Eutrema salsugineum HOM05D006503 ORTHO05D008116 5.3e-18 97.1 101 48.5
PGSC0003DMG401003570 Solanum tuberosum HOM05D006503 ORTHO05D008116 5.3e-18 97.1 122 41.8
Carub.0002s2640 Capsella rubella HOM05D006503 ORTHO05D008116 6.9e-18 96.7 102 48.0
Duzib150G0906 Durio zibethinus HOM05D006503 ORTHO05D008116 6.9e-18 96.7 191 67.5
CiPaw.15G110400 Carya illinoinensis HOM05D006503 ORTHO05D008116 1.2e-17 95.9 192 55.2
Actinidia17234 Actinidia chinensis HOM05D006503 ORTHO05D008116 1.5e-17 95.5 94 45.7
C02p36700 Brassica napus HOM05D006503 ORTHO05D008116 1.5e-17 95.5 101 48.5
RcHm_v2.0_Chr5g0022901 Rosa chinensis HOM05D006503 ORTHO05D008116 1.5e-17 95.5 191 64.4
BcaC03g15903 Brassica carinata HOM05D006503 ORTHO05D008116 2.0e-17 95.1 101 48.5
BolC2t09665H Brassica oleracea HOM05D006503 ORTHO05D008116 2.0e-17 95.1 101 48.5
Prupe.4G124200 Prunus persica HOM05D006503 ORTHO05D008116 2.0e-17 95.1 188 67.6
MELO3C019605.2 Cucumis melo HOM05D006503 ORTHO05D008116 2.6e-17 94.7 113 43.4
GSVIVG01033259001 Vitis vinifera HOM05D006503 ORTHO05D008116 4.5e-17 94.0 109 44.0
CARHR036700 Cardamine hirsuta HOM05D006503 ORTHO05D008116 5.9e-17 93.6 101 46.5
MD05G1241300 Malus domestica HOM05D006503 ORTHO05D008116 5.9e-17 93.6 190 65.8
Solyc02g083780.3 Solanum lycopersicum HOM05D002880 ORTHO05D008116 5.9e-17 93.6 122 41.8
Sopen02g028560 Solanum pennellii HOM05D006503 ORTHO05D008116 5.9e-17 93.6 122 41.8
CsaV3_6G013320 Cucumis sativus L. HOM05D006503 ORTHO05D008116 7.7e-17 93.2 136 40.4
MSTRG.6424 Avicennia marina HOM05D006503 ORTHO05D008116 1.0e-16 92.8 124 40.3
SGA_v2.0_scaffold10G05267 Striga asiatica HOM05D006503 ORTHO05D008116 1.0e-16 92.8 85 50.6
Thecc.09G181100 Theobroma cacao HOM05D006503 ORTHO05D008116 1.0e-16 92.8 126 39.7
ClCG02G018860 Citrullus lanatus HOM05D006503 ORTHO05D008116 1.3e-16 92.4 123 41.5
vmacro09073 Vaccinium macrocarpon HOM05D006503 ORTHO05D008116 1.7e-16 92.0 191 63.9
CAN.G1274.14 Capsicum annuum HOM05D006503 ORTHO05D008116 2.2e-16 91.7 110 40.9
Migut.J01751 Erythranthe guttata HOM05D006503 ORTHO05D008116 2.2e-16 91.7 191 63.9
Ciclev10004347m.g Citrus clementina HOM05D006503 ORTHO05D008116 5.0e-16 90.5 130 37.7
TAR633G2474 Trochodendron aralioides HOM05D006503 ORTHO05D008116 6.5e-16 90.1 191 69.6
COL.COLO4_08106 Corchorus olitorius HOM05D006503 ORTHO05D008116 8.5e-16 89.7 191 58.1
FvH4_3g13661 Fragaria vesca HOM05D006503 ORTHO05D008116 1.1e-15 89.4 66 62.1
Sc13g0001660 Simmondsia chinensis HOM05D006503 ORTHO05D008116 1.1e-15 89.4 92 45.7
THA.LOC104808133 Tarenaya hassleriana HOM05D006503 ORTHO05D008116 1.1e-15 89.4 94 47.9
VMungo1127G2158 Vigna mungo HOM05D006503 ORTHO05D008116 1.1e-15 89.4 57 75.4
Actinidia38544 Actinidia chinensis HOM05D006503 ORTHO05D008116 1.9e-15 88.6 191 60.2
AUR62038172 Chenopodium quinoa HOM05D006503 ORTHO05D008116 1.9e-15 88.6 94 41.5
Cc06_g17640 Coffea canephora HOM05D006503 ORTHO05D008116 2.5e-15 88.2 193 58.0
Lsat_1_v5_gn_5_161280 Lactuca sativa HOM05D006503 ORTHO05D008116 2.5e-15 88.2 122 41.8
Peaxi162Scf00020g00194 Petunia axillaris HOM05D006503 ORTHO05D008116 2.5e-15 88.2 67 59.7
Cpa.g.sc32.63 Carica papaya HOM05D006503 ORTHO05D008116 3.2e-15 87.8 93 45.2
Oeu016352.1 Olea europaea HOM05D006503 ORTHO05D008116 4.2e-15 87.4 191 63.4
TAR633G2684 Trochodendron aralioides HOM05D000623 ORTHO05D008116 7.2e-15 86.7 190 68.4
AUR62038078 Chenopodium quinoa HOM05D006503 ORTHO05D008116 9.4e-15 86.3 94 39.4
Gohir.A05G408900 Gossypium hirsutum HOM05D006503 ORTHO05D008116 1.2e-14 85.9 122 36.9
SalBow6G5105 Salvia bowleyana HOM05D006503 ORTHO05D008116 1.2e-14 85.9 191 59.7
Nn5g26957 Nelumbo nucifera HOM05D006503 ORTHO05D008116 2.1e-14 85.1 66 59.1
Gohir.D04G006500 Gossypium hirsutum HOM05D006503 ORTHO05D008116 3.6e-14 84.3 122 36.1
Gorai.012G007700 Gossypium raimondii HOM05D006503 ORTHO05D008116 3.6e-14 84.3 122 36.1
TWI77G0486 Tripterygium wilfordii HOM05D006503 ORTHO05D008116 3.6e-14 84.3 110 42.7
BcaB05g25205 Brassica carinata HOM05D006503 ORTHO05D008116 4.6e-14 84.0 173 34.1
Eucgr.A02340 Eucalyptus grandis HOM05D006503 ORTHO05D008116 7.9e-14 83.2 79 44.3
CANSAT21G0513 Cannabis sativa HOM05D006503 ORTHO05D008116 1.0e-13 82.8 97 43.3
SalBow6G4098 Salvia bowleyana HOM05D006503 ORTHO05D008116 1.8e-13 82.0 67 56.7
PGR004G2741 Punica granatum HOM05D006503 ORTHO05D008116 3.9e-13 80.9 116 38.8
ATR0177G061 Amborella trichopoda HOM05D006503 ORTHO05D008116 5.1e-13 80.5 64 57.8
arahy.Tifrunner.gnm1.ann1.1KXV0X Arachis hypogaea HOM05D006503 ORTHO05D008116 6.7e-13 80.1 191 46.6
SHI16040 Sapria himalayana HOM05D006503 ORTHO05D008116 6.7e-13 80.1 109 37.6
Sabra06G0034600 Salix brachista HOM05D006503 ORTHO05D008116 1.1e-12 79.3 121 34.7
Aqoxy2G03029 Aquilegia oxysepala HOM05D006503 ORTHO05D008116 3.3e-12 77.8 66 54.5
ECA248G2018 Erigeron canadensis HOM05D006503 ORTHO05D008116 3.3e-12 77.8 81 46.9
Os09g0110200 Oryza sativa ssp. japonica HOM05D006503 ORTHO05D008116 3.3e-12 77.8 61 60.7
ATR0561G112 Amborella trichopoda HOM05D006503 ORTHO05D008116 9.7e-12 76.3 65 53.8
TAR629G2271 Trochodendron aralioides HOM05D006503 ORTHO05D008116 9.7e-12 76.3 67 55.2
HanXRQChr13g0395951 Helianthus annuus HOM05D006503 ORTHO05D008116 2.2e-11 75.1 65 53.8
Ah.13g074010 Amaranthus hybridus HOM05D006503 ORTHO05D008116 4.8e-11 73.9 103 36.9
arahy.Tifrunner.gnm1.ann1.LJ83VM Arachis hypogaea HOM05D006503 ORTHO05D008116 6.9e-10 70.1 71 49.3
Medtr8g463610 Medicago truncatula HOM05D006503 ORTHO05D008116 1.5e-09 68.9 193 41.5
CDE05G1884 Ceratophyllum demersum HOM05D006503 ORTHO05D008116 4.5e-09 67.4 67 47.8
Zm00001eb221750 Zea mays HOM05D006503 ORTHO05D008116 2.2e-08 65.1 55 56.4
Medtr3g094280 Medicago truncatula HOM05D006503 ORTHO05D008116 8.5e-08 63.2 68 48.5
HPP92_001414 Vanilla planifolia HOM05D006503 ORTHO05D008116 1.4e-07 62.4 81 37.0
HPP92_001421 Vanilla planifolia HOM05D006503 ORTHO05D008116 1.9e-07 62.0 81 35.8
SEGI_01901 Sequoiadendron giganteum HOM05D006503 ORTHO05D008116 5.5e-07 60.5 65 40.0
Hund03989 Selenicereus undatus HOM05D006503 ORTHO05D008116 7.2e-07 60.1 99 31.3
EL10Ac3g04919 Beta vulgaris HOM05D002444 ORTHO05D009235 2.1e-06 58.5 100 35.0
QL02p088731 Quercus lobata HOM05D002444 ORTHO05D009235 6.1e-06 57.0 101 30.7
Sabra10G0114800 Salix brachista HOM05D007409 ORTHO05D009264 6.1e-06 57.0 74 36.5
Aa31LG7G4660 Aethionema arabicum HOM05D000424 ORTHO05D000355 7.9e-06 56.6 79 35.4
Lalb_Chr23g0266001 Lupinus albus HOM05D000424 ORTHO05D000355 7.9e-06 56.6 68 38.2


User provided reference genes

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